RNA–Protein interactions for RNA: ENST00000369561.8

HIPK1-207, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 5 BASIC

Gene HIPK1, Length 3,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-207ENST00000369561 NISCHQ9Y2I1 1504 aa35.04■■■■□ 3.2
HIPK1-207ENST00000369561 SHROOM4Q9ULL8 1493 aa31.71■■■□□ 2.67
HIPK1-207ENST00000369561 SUPT5HO00267 1087 aaKnown RBP31.58■■■□□ 2.65
HIPK1-207ENST00000369561 HRCP23327 699 aa30.8■■■□□ 2.52
HIPK1-207ENST00000369561 PCGF6Q9BYE7 350 aa30.79■■■□□ 2.52
HIPK1-207ENST00000369561 DCAF8L2P0C7V8 631 aa30.6■■■□□ 2.49
HIPK1-207ENST00000369561 PPARGC1BQ86YN6 1023 aaKnown RBP30.52■■■□□ 2.48
HIPK1-207ENST00000369561 CHIC1Q5VXU3 224 aa30.43■■■□□ 2.46
HIPK1-207ENST00000369561 MYO15BQ96JP2 1530 aa30.25■■■□□ 2.43
HIPK1-207ENST00000369561 LOC105371045A0A1W2PR82 267 aa30■■■□□ 2.39
HIPK1-207ENST00000369561 CCDC180Q9P1Z9 1646 aa29.77■■■□□ 2.36
HIPK1-207ENST00000369561 ZCCHC6Q5VYS8 1495 aaKnown RBP29.64■■■□□ 2.34
HIPK1-207ENST00000369561 TRIM26Q12899 539 aaPredicted RBP29.57■■■□□ 2.32
HIPK1-207ENST00000369561 EHMT2Q96KQ7 1210 aa29.52■■■□□ 2.32
HIPK1-207ENST00000369561 FAM9AQ8IZU1 332 aaPredicted RBP29.35■■■□□ 2.29
HIPK1-207ENST00000369561 DCAF1Q9Y4B6 1507 aa29.35■■■□□ 2.29
HIPK1-207ENST00000369561 ZEB1P37275 1124 aaPredicted RBP29.17■■■□□ 2.26
HIPK1-207ENST00000369561 PELP1Q8IZL8 1130 aaKnown RBP29.13■■■□□ 2.25
HIPK1-207ENST00000369561 TRIM41Q8WV44 630 aa29.06■■■□□ 2.24
HIPK1-207ENST00000369561 SCAF1Q9H7N4 1312 aaKnown RBP29■■■□□ 2.23
HIPK1-207ENST00000369561 ABCC9O60706 1549 aa28.71■■■□□ 2.19
HIPK1-207ENST00000369561 TTBK1Q5TCY1 1321 aaPredicted RBP28.68■■■□□ 2.18
HIPK1-207ENST00000369561 CCER1Q8TC90 406 aaPredicted RBP28.66■■■□□ 2.18
HIPK1-207ENST00000369561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.66■■■□□ 2.18
HIPK1-207ENST00000369561 NEUROD1Q13562 356 aa28.45■■■□□ 2.15
HIPK1-207ENST00000369561 ACIN1Q9UKV3 1341 aaKnown RBP28.43■■■□□ 2.14
HIPK1-207ENST00000369561 GTF3C3Q9Y5Q9 886 aa28.39■■■□□ 2.13
HIPK1-207ENST00000369561 CENPBP07199 599 aaPredicted RBP28.36■■■□□ 2.13
HIPK1-207ENST00000369561 DIEXFQ68CQ4 756 aaKnown RBP28.33■■■□□ 2.13
HIPK1-207ENST00000369561 RSF1Q96T23 1441 aaPredicted RBP28.26■■■□□ 2.11
HIPK1-207ENST00000369561 YTHDC1Q96MU7 727 aaKnown RBP28.23■■■□□ 2.11
HIPK1-207ENST00000369561 SCRIBQ14160 1630 aa28.17■■■□□ 2.1
HIPK1-207ENST00000369561 RB1CC1Q8TDY2 1594 aa28.03■■■□□ 2.08
HIPK1-207ENST00000369561 MYT1Q01538 1121 aa27.83■■■□□ 2.05
HIPK1-207ENST00000369561 UBTFP17480 764 aaKnown RBP27.79■■■□□ 2.04
HIPK1-207ENST00000369561 NACADO15069 1562 aa27.79■■■□□ 2.04
HIPK1-207ENST00000369561 ZNF316A6NFI3 1004 aaPredicted RBP27.75■■■□□ 2.03
HIPK1-207ENST00000369561 HNRNPUL2Q1KMD3 747 aaKnown RBP27.71■■■□□ 2.03
HIPK1-207ENST00000369561 CECR2Q9BXF3 1484 aa27.67■■■□□ 2.02
HIPK1-207ENST00000369561 MIER1Q8N108 512 aa27.59■■■□□ 2.01
HIPK1-207ENST00000369561 RANGAP1P46060 587 aaPredicted RBP27.58■■■□□ 2.01
HIPK1-207ENST00000369561 MROH2BQ7Z745 1585 aa27.48■■□□□ 1.99
HIPK1-207ENST00000369561 PABPN1Q86U42 306 aaKnown RBP eCLIP27.46■■□□□ 1.99
HIPK1-207ENST00000369561 CEP162Q5TB80 1403 aa27.42■■□□□ 1.98
HIPK1-207ENST00000369561 APLP2Q06481 763 aa27.37■■□□□ 1.97
HIPK1-207ENST00000369561 CSRNP3Q8WYN3 585 aa27.34■■□□□ 1.97
HIPK1-207ENST00000369561 WIZO95785 1651 aa27.32■■□□□ 1.96
HIPK1-207ENST00000369561 CCDC88BA6NC98 1476 aa27.27■■□□□ 1.96
HIPK1-207ENST00000369561 SOGA1O94964 1423 aa27.26■■□□□ 1.95
HIPK1-207ENST00000369561 ABCC8Q09428 1581 aa27.25■■□□□ 1.95
HIPK1-207ENST00000369561 TNIKQ9UKE5 1360 aa27.15■■□□□ 1.94
HIPK1-207ENST00000369561 UNC13AQ9UPW8 1703 aa27.15■■□□□ 1.94
HIPK1-207ENST00000369561 WRNQ14191 1432 aaPredicted RBP eCLIP27.14■■□□□ 1.94
HIPK1-207ENST00000369561 RUSC2Q8N2Y8 1516 aa27.05■■□□□ 1.92
HIPK1-207ENST00000369561 SUPT16HQ9Y5B9 1047 aaKnown RBP26.92■■□□□ 1.9
HIPK1-207ENST00000369561 BCANQ96GW7 911 aa26.92■■□□□ 1.9
HIPK1-207ENST00000369561 BICRAQ9NZM4 1560 aa26.91■■□□□ 1.9
HIPK1-207ENST00000369561 ITGAEP38570 1179 aa26.91■■□□□ 1.9
HIPK1-207ENST00000369561 BAZ1AQ9NRL2 1556 aaPredicted RBP26.88■■□□□ 1.89
HIPK1-207ENST00000369561 GOLGA3Q08378 1498 aa26.88■■□□□ 1.89
HIPK1-207ENST00000369561 CLIP1P30622 1438 aa26.83■■□□□ 1.89
HIPK1-207ENST00000369561 EEA1Q15075 1411 aa26.79■■□□□ 1.88
HIPK1-207ENST00000369561 SMARCA4P51532 1647 aa26.71■■□□□ 1.87
HIPK1-207ENST00000369561 TSHZ2Q9NRE2 1034 aa26.68■■□□□ 1.86
HIPK1-207ENST00000369561 TOP2AP11388 1531 aaKnown RBP26.67■■□□□ 1.86
HIPK1-207ENST00000369561 EIF4G1Q04637 1599 aaKnown RBP26.66■■□□□ 1.86
HIPK1-207ENST00000369561 KCNH8Q96L42 1107 aa26.62■■□□□ 1.85
HIPK1-207ENST00000369561 CEP164Q9UPV0 1460 aa26.6■■□□□ 1.85
HIPK1-207ENST00000369561 SMARCA2P51531 1590 aa26.6■■□□□ 1.85
HIPK1-207ENST00000369561 CLSPNQ9HAW4 1339 aa26.6■■□□□ 1.85
HIPK1-207ENST00000369561 VPS8Q8N3P4 1428 aa26.59■■□□□ 1.85
HIPK1-207ENST00000369561 ANP32EQ9BTT0 268 aa26.58■■□□□ 1.85
HIPK1-207ENST00000369561 FKBP8Q14318 412 aa26.57■■□□□ 1.84
HIPK1-207ENST00000369561 DHX57Q6P158 1386 aaKnown RBP26.5■■□□□ 1.83
HIPK1-207ENST00000369561 KANK4Q5T7N3 995 aaPredicted RBP26.5■■□□□ 1.83
HIPK1-207ENST00000369561 NEFLP07196 543 aa26.5■■□□□ 1.83
HIPK1-207ENST00000369561 DDX10Q13206 875 aaKnown RBP26.48■■□□□ 1.83
HIPK1-207ENST00000369561 RAPGEF2Q9Y4G8 1499 aa26.45■■□□□ 1.83
HIPK1-207ENST00000369561 HIRIP3Q9BW71 556 aaPredicted RBP26.42■■□□□ 1.82
HIPK1-207ENST00000369561 TRIM52Q96A61 297 aa26.38■■□□□ 1.81
HIPK1-207ENST00000369561 ATP1B4Q9UN42 357 aaPredicted RBP26.37■■□□□ 1.81
HIPK1-207ENST00000369561 BCL11AQ9H165 835 aa26.31■■□□□ 1.8
HIPK1-207ENST00000369561 ATAD2BQ9ULI0 1458 aa26.28■■□□□ 1.8
HIPK1-207ENST00000369561 FAM50AQ14320 339 aaKnown RBP26.26■■□□□ 1.79
HIPK1-207ENST00000369561 KIF21BO75037 1637 aa26.25■■□□□ 1.79
HIPK1-207ENST00000369561 SIN3AQ96ST3 1273 aa26.24■■□□□ 1.79
HIPK1-207ENST00000369561 SYNJ1O43426 1573 aa26.24■■□□□ 1.79
HIPK1-207ENST00000369561 BAZ1BQ9UIG0 1483 aaKnown RBP26.19■■□□□ 1.78
HIPK1-207ENST00000369561 RBM19Q9Y4C8 960 aaKnown RBP26.18■■□□□ 1.78
HIPK1-207ENST00000369561 ERICH6Q7L0X2 663 aa26.17■■□□□ 1.78
HIPK1-207ENST00000369561 ANP32CO43423 234 aa26.15■■□□□ 1.78
HIPK1-207ENST00000369561 CCNB3Q8WWL7 1395 aa26.14■■□□□ 1.78
HIPK1-207ENST00000369561 IRX6P78412 446 aaPredicted RBP26.1■■□□□ 1.77
HIPK1-207ENST00000369561 PEG3Q9GZU2 1588 aa26.08■■□□□ 1.77
HIPK1-207ENST00000369561 RAB3GAP2Q9H2M9 1393 aa26.08■■□□□ 1.76
HIPK1-207ENST00000369561 P3H3Q8IVL6 736 aa26.06■■□□□ 1.76
HIPK1-207ENST00000369561 ARAP1Q96P48 1450 aa25.97■■□□□ 1.75
HIPK1-207ENST00000369561 HNRNPUQ00839 825 aaKnown RBP eCLIP25.94■■□□□ 1.74
HIPK1-207ENST00000369561 CDK11AQ9UQ88 783 aaPredicted RBP25.91■■□□□ 1.74
HIPK1-207ENST00000369561 RRBP1Q9P2E9 1410 aaKnown RBP25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms