RNA–Protein interactions for RNA: ENST00000306773.4

NPTX1-201, Transcript of neuronal pentraxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPTX1, Length 5,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPTX1-201ENST00000306773 DCAF8L2P0C7V8 631 aa33.41■■■□□ 2.94
NPTX1-201ENST00000306773 NISCHQ9Y2I1 1504 aa33.18■■■□□ 2.9
NPTX1-201ENST00000306773 SUPT5HO00267 1087 aaKnown RBP31.63■■■□□ 2.65
NPTX1-201ENST00000306773 SHROOM4Q9ULL8 1493 aa31.25■■■□□ 2.59
NPTX1-201ENST00000306773 EHMT2Q96KQ7 1210 aa30.15■■■□□ 2.42
NPTX1-201ENST00000306773 APLP2Q06481 763 aa29.99■■■□□ 2.39
NPTX1-201ENST00000306773 FAM9AQ8IZU1 332 aaPredicted RBP29.71■■■□□ 2.35
NPTX1-201ENST00000306773 TRIM41Q8WV44 630 aa29.49■■■□□ 2.31
NPTX1-201ENST00000306773 PCGF6Q9BYE7 350 aa29.48■■■□□ 2.31
NPTX1-201ENST00000306773 PELP1Q8IZL8 1130 aaKnown RBP29.23■■■□□ 2.27
NPTX1-201ENST00000306773 TTBK1Q5TCY1 1321 aaPredicted RBP29.12■■■□□ 2.25
NPTX1-201ENST00000306773 RANGAP1P46060 587 aaPredicted RBP29.05■■■□□ 2.24
NPTX1-201ENST00000306773 UBTFP17480 764 aaKnown RBP29.03■■■□□ 2.24
NPTX1-201ENST00000306773 ZEB1P37275 1124 aaPredicted RBP28.9■■■□□ 2.22
NPTX1-201ENST00000306773 ATP1B4Q9UN42 357 aaPredicted RBP28.88■■■□□ 2.21
NPTX1-201ENST00000306773 CCER1Q8TC90 406 aaPredicted RBP28.72■■■□□ 2.19
NPTX1-201ENST00000306773 CENPBP07199 599 aaPredicted RBP28.66■■■□□ 2.18
NPTX1-201ENST00000306773 ABCC9O60706 1549 aa28.42■■■□□ 2.14
NPTX1-201ENST00000306773 CHIC1Q5VXU3 224 aa28.33■■■□□ 2.13
NPTX1-201ENST00000306773 TRIM26Q12899 539 aaPredicted RBP28.26■■■□□ 2.11
NPTX1-201ENST00000306773 HRCP23327 699 aa28.22■■■□□ 2.11
NPTX1-201ENST00000306773 PPARGC1BQ86YN6 1023 aaKnown RBP28.18■■■□□ 2.1
NPTX1-201ENST00000306773 PABPN1Q86U42 306 aaKnown RBP eCLIP28.08■■■□□ 2.09
NPTX1-201ENST00000306773 YTHDC1Q96MU7 727 aaKnown RBP28.07■■■□□ 2.08
NPTX1-201ENST00000306773 LOC105371045A0A1W2PR82 267 aa28.03■■■□□ 2.08
NPTX1-201ENST00000306773 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.03■■■□□ 2.08
NPTX1-201ENST00000306773 HNRNPUL2Q1KMD3 747 aaKnown RBP28.03■■■□□ 2.08
NPTX1-201ENST00000306773 ERICH6Q7L0X2 663 aa28■■■□□ 2.07
NPTX1-201ENST00000306773 ITGAEP38570 1179 aa27.86■■■□□ 2.05
NPTX1-201ENST00000306773 NEFLP07196 543 aa27.82■■■□□ 2.04
NPTX1-201ENST00000306773 MYT1LQ9UL68 1186 aa27.8■■■□□ 2.04
NPTX1-201ENST00000306773 MYT1Q01538 1121 aa27.65■■■□□ 2.02
NPTX1-201ENST00000306773 ZCCHC6Q5VYS8 1495 aaKnown RBP27.49■■□□□ 1.99
NPTX1-201ENST00000306773 CCDC180Q9P1Z9 1646 aa27.42■■□□□ 1.98
NPTX1-201ENST00000306773 POLR3GLQ9BT43 218 aa27.38■■□□□ 1.97
NPTX1-201ENST00000306773 FAM50AQ14320 339 aaKnown RBP27.36■■□□□ 1.97
NPTX1-201ENST00000306773 SCRIBQ14160 1630 aa27.32■■□□□ 1.96
NPTX1-201ENST00000306773 DIEXFQ68CQ4 756 aaKnown RBP27.24■■□□□ 1.95
NPTX1-201ENST00000306773 CSRNP3Q8WYN3 585 aa27.21■■□□□ 1.95
NPTX1-201ENST00000306773 TRIM52Q96A61 297 aa27.15■■□□□ 1.94
NPTX1-201ENST00000306773 FBLN2P98095 1184 aa27.14■■□□□ 1.94
NPTX1-201ENST00000306773 CNGB1Q14028 1251 aaPredicted RBP26.95■■□□□ 1.9
NPTX1-201ENST00000306773 SLC4A1APQ9BWU0 796 aaKnown RBP26.93■■□□□ 1.9
NPTX1-201ENST00000306773 NEUROD1Q13562 356 aa26.92■■□□□ 1.9
NPTX1-201ENST00000306773 RB1CC1Q8TDY2 1594 aa26.88■■□□□ 1.89
NPTX1-201ENST00000306773 P3H3Q8IVL6 736 aa26.86■■□□□ 1.89
NPTX1-201ENST00000306773 CDK11AQ9UQ88 783 aaPredicted RBP26.83■■□□□ 1.89
NPTX1-201ENST00000306773 DAXXQ9UER7 740 aaPredicted RBP26.81■■□□□ 1.88
NPTX1-201ENST00000306773 GTF3C3Q9Y5Q9 886 aa26.79■■□□□ 1.88
NPTX1-201ENST00000306773 NACADO15069 1562 aa26.68■■□□□ 1.86
NPTX1-201ENST00000306773 ZNF326Q5BKZ1 582 aaKnown RBP26.68■■□□□ 1.86
NPTX1-201ENST00000306773 ARID3CA6NKF2 412 aa26.65■■□□□ 1.86
NPTX1-201ENST00000306773 ANP32CO43423 234 aa26.63■■□□□ 1.85
NPTX1-201ENST00000306773 ZNF316A6NFI3 1004 aaPredicted RBP26.62■■□□□ 1.85
NPTX1-201ENST00000306773 ZNF777Q9ULD5 760 aaPredicted RBP26.57■■□□□ 1.84
NPTX1-201ENST00000306773 DCAF1Q9Y4B6 1507 aa26.53■■□□□ 1.84
NPTX1-201ENST00000306773 BCANQ96GW7 911 aa26.51■■□□□ 1.83
NPTX1-201ENST00000306773 ACIN1Q9UKV3 1341 aaKnown RBP26.49■■□□□ 1.83
NPTX1-201ENST00000306773 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
NPTX1-201ENST00000306773 CLSPNQ9HAW4 1339 aa26.4■■□□□ 1.82
NPTX1-201ENST00000306773 RTL5Q5HYW3 569 aaPredicted RBP26.4■■□□□ 1.82
NPTX1-201ENST00000306773 NPM1P06748 294 aaKnown RBP eCLIP26.39■■□□□ 1.82
NPTX1-201ENST00000306773 EEA1Q15075 1411 aa26.37■■□□□ 1.81
NPTX1-201ENST00000306773 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
NPTX1-201ENST00000306773 TONSLQ96HA7 1378 aa26.28■■□□□ 1.8
NPTX1-201ENST00000306773 CHMP7Q8WUX9 453 aaPredicted RBP26.27■■□□□ 1.8
NPTX1-201ENST00000306773 ESF1Q9H501 851 aaKnown RBP26.26■■□□□ 1.79
NPTX1-201ENST00000306773 CLIP1P30622 1438 aa26.25■■□□□ 1.79
NPTX1-201ENST00000306773 NEFMP07197 916 aa26.22■■□□□ 1.79
NPTX1-201ENST00000306773 MTUS2Q5JR59 1369 aa26.21■■□□□ 1.79
NPTX1-201ENST00000306773 WRNQ14191 1432 aaPredicted RBP eCLIP26.2■■□□□ 1.78
NPTX1-201ENST00000306773 BAZ1AQ9NRL2 1556 aaPredicted RBP26.17■■□□□ 1.78
NPTX1-201ENST00000306773 GOLGA3Q08378 1498 aa26.16■■□□□ 1.78
NPTX1-201ENST00000306773 TSPY4P0CV99 314 aa26.14■■□□□ 1.78
NPTX1-201ENST00000306773 TSPY10P0CW01 314 aa26.14■■□□□ 1.78
NPTX1-201ENST00000306773 ZBTB47Q9UFB7 747 aaPredicted RBP26.11■■□□□ 1.77
NPTX1-201ENST00000306773 MYO15BQ96JP2 1530 aa26.07■■□□□ 1.76
NPTX1-201ENST00000306773 CHIC2Q9UKJ5 165 aa26.07■■□□□ 1.76
NPTX1-201ENST00000306773 KIF27Q86VH2 1401 aa26.07■■□□□ 1.76
NPTX1-201ENST00000306773 STAG3Q9UJ98 1225 aa26.06■■□□□ 1.76
NPTX1-201ENST00000306773 CHGAP10645 457 aaKnown RBP26.05■■□□□ 1.76
NPTX1-201ENST00000306773 CANXP27824 592 aaKnown RBP26.04■■□□□ 1.76
NPTX1-201ENST00000306773 CEP162Q5TB80 1403 aa25.99■■□□□ 1.75
NPTX1-201ENST00000306773 CEP164Q9UPV0 1460 aa25.95■■□□□ 1.75
NPTX1-201ENST00000306773 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.95■■□□□ 1.74
NPTX1-201ENST00000306773 TNIKQ9UKE5 1360 aa25.93■■□□□ 1.74
NPTX1-201ENST00000306773 PLEKHD1A6NEE1 506 aa25.91■■□□□ 1.74
NPTX1-201ENST00000306773 CECR2Q9BXF3 1484 aa25.9■■□□□ 1.74
NPTX1-201ENST00000306773 SLC24A1O60721 1099 aa25.9■■□□□ 1.74
NPTX1-201ENST00000306773 FKBP8Q14318 412 aa25.86■■□□□ 1.73
NPTX1-201ENST00000306773 DDX10Q13206 875 aaKnown RBP25.83■■□□□ 1.73
NPTX1-201ENST00000306773 SCAF1Q9H7N4 1312 aaKnown RBP25.79■■□□□ 1.72
NPTX1-201ENST00000306773 ERCC6Q03468 1493 aa25.76■■□□□ 1.71
NPTX1-201ENST00000306773 RRP7BPQ9NSQ0 103 aa25.74■■□□□ 1.71
NPTX1-201ENST00000306773 ANP32AP39687 249 aaKnown RBP25.73■■□□□ 1.71
NPTX1-201ENST00000306773 HNRNPUQ00839 825 aaKnown RBP eCLIP25.72■■□□□ 1.71
NPTX1-201ENST00000306773 KCNH8Q96L42 1107 aa25.72■■□□□ 1.71
NPTX1-201ENST00000306773 KDM2AQ9Y2K7 1162 aa25.71■■□□□ 1.71
NPTX1-201ENST00000306773 MIER1Q8N108 512 aa25.69■■□□□ 1.7
NPTX1-201ENST00000306773 CFDP1Q9UEE9 299 aaPredicted RBP25.68■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms