RNA–Protein interactions for RNA: ENST00000272224.4

GDF7-201, Transcript of growth differentiation factor 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF7, Length 9,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF7-201ENST00000272224 PELP1Q8IZL8 1130 aaKnown RBP29.83■■■□□ 2.37
GDF7-201ENST00000272224 DCAF8L2P0C7V8 631 aa29.29■■■□□ 2.28
GDF7-201ENST00000272224 MYT1Q01538 1121 aa28.85■■■□□ 2.21
GDF7-201ENST00000272224 SUPT5HO00267 1087 aaKnown RBP28.54■■■□□ 2.16
GDF7-201ENST00000272224 CCER1Q8TC90 406 aaPredicted RBP28.31■■■□□ 2.12
GDF7-201ENST00000272224 NISCHQ9Y2I1 1504 aa28.3■■■□□ 2.12
GDF7-201ENST00000272224 CENPBP07199 599 aaPredicted RBP28.24■■■□□ 2.11
GDF7-201ENST00000272224 ERICH6Q7L0X2 663 aa28.17■■■□□ 2.1
GDF7-201ENST00000272224 ZEB1P37275 1124 aaPredicted RBP28.03■■■□□ 2.08
GDF7-201ENST00000272224 APLP2Q06481 763 aa28.01■■■□□ 2.07
GDF7-201ENST00000272224 SHROOM4Q9ULL8 1493 aa27.75■■■□□ 2.03
GDF7-201ENST00000272224 PCGF6Q9BYE7 350 aa27.62■■■□□ 2.01
GDF7-201ENST00000272224 NEFLP07196 543 aa27.5■■□□□ 1.99
GDF7-201ENST00000272224 EHMT2Q96KQ7 1210 aa27.43■■□□□ 1.98
GDF7-201ENST00000272224 FAM9AQ8IZU1 332 aaPredicted RBP27.36■■□□□ 1.97
GDF7-201ENST00000272224 YTHDC1Q96MU7 727 aaKnown RBP27.17■■□□□ 1.94
GDF7-201ENST00000272224 DAXXQ9UER7 740 aaPredicted RBP26.85■■□□□ 1.89
GDF7-201ENST00000272224 TTBK1Q5TCY1 1321 aaPredicted RBP26.84■■□□□ 1.89
GDF7-201ENST00000272224 TRIM41Q8WV44 630 aa26.68■■□□□ 1.86
GDF7-201ENST00000272224 TRIM26Q12899 539 aaPredicted RBP26.58■■□□□ 1.85
GDF7-201ENST00000272224 HRCP23327 699 aa26.56■■□□□ 1.84
GDF7-201ENST00000272224 RTL5Q5HYW3 569 aaPredicted RBP26.46■■□□□ 1.83
GDF7-201ENST00000272224 UBTFP17480 764 aaKnown RBP26.39■■□□□ 1.82
GDF7-201ENST00000272224 RANGAP1P46060 587 aaPredicted RBP26.21■■□□□ 1.79
GDF7-201ENST00000272224 ZNF316A6NFI3 1004 aaPredicted RBP26.21■■□□□ 1.79
GDF7-201ENST00000272224 ATP1B4Q9UN42 357 aaPredicted RBP26.18■■□□□ 1.78
GDF7-201ENST00000272224 DIEXFQ68CQ4 756 aaKnown RBP25.89■■□□□ 1.74
GDF7-201ENST00000272224 CLSPNQ9HAW4 1339 aa25.76■■□□□ 1.71
GDF7-201ENST00000272224 PPARGC1BQ86YN6 1023 aaKnown RBP25.65■■□□□ 1.7
GDF7-201ENST00000272224 CDK11AQ9UQ88 783 aaPredicted RBP25.62■■□□□ 1.69
GDF7-201ENST00000272224 POLR3GLQ9BT43 218 aa25.6■■□□□ 1.69
GDF7-201ENST00000272224 MYT1LQ9UL68 1186 aa25.55■■□□□ 1.68
GDF7-201ENST00000272224 GTF3C3Q9Y5Q9 886 aa25.54■■□□□ 1.68
GDF7-201ENST00000272224 GLIPR1L2Q4G1C9 344 aa25.49■■□□□ 1.67
GDF7-201ENST00000272224 ITGAEP38570 1179 aa25.44■■□□□ 1.66
GDF7-201ENST00000272224 HNRNPUL2Q1KMD3 747 aaKnown RBP25.44■■□□□ 1.66
GDF7-201ENST00000272224 ANP32AP39687 249 aaKnown RBP25.39■■□□□ 1.66
GDF7-201ENST00000272224 CHIC1Q5VXU3 224 aa25.35■■□□□ 1.65
GDF7-201ENST00000272224 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.33■■□□□ 1.65
GDF7-201ENST00000272224 ANP32CO43423 234 aa25.32■■□□□ 1.64
GDF7-201ENST00000272224 ACIN1Q9UKV3 1341 aaKnown RBP25.25■■□□□ 1.63
GDF7-201ENST00000272224 ZBTB47Q9UFB7 747 aaPredicted RBP25.24■■□□□ 1.63
GDF7-201ENST00000272224 LOC105371045A0A1W2PR82 267 aa25.21■■□□□ 1.63
GDF7-201ENST00000272224 ANP32BQ92688 251 aaKnown RBP25.2■■□□□ 1.63
GDF7-201ENST00000272224 BCANQ96GW7 911 aa25.19■■□□□ 1.62
GDF7-201ENST00000272224 SLC4A1APQ9BWU0 796 aaKnown RBP25.1■■□□□ 1.61
GDF7-201ENST00000272224 CNGB1Q14028 1251 aaPredicted RBP25.09■■□□□ 1.61
GDF7-201ENST00000272224 EIF5BO60841 1220 aaKnown RBP25.03■■□□□ 1.6
GDF7-201ENST00000272224 CANXP27824 592 aaKnown RBP25.01■■□□□ 1.59
GDF7-201ENST00000272224 FAM50AQ14320 339 aaKnown RBP24.94■■□□□ 1.58
GDF7-201ENST00000272224 UPF2Q9HAU5 1272 aaKnown RBP24.84■■□□□ 1.57
GDF7-201ENST00000272224 NEUROD1Q13562 356 aa24.81■■□□□ 1.56
GDF7-201ENST00000272224 TRIM52Q96A61 297 aa24.81■■□□□ 1.56
GDF7-201ENST00000272224 DCAF1Q9Y4B6 1507 aa24.77■■□□□ 1.56
GDF7-201ENST00000272224 HSP90AA1P07900 732 aaKnown RBP24.75■■□□□ 1.55
GDF7-201ENST00000272224 NEFMP07197 916 aa24.75■■□□□ 1.55
GDF7-201ENST00000272224 NPM2Q86SE8 214 aaKnown RBP24.68■■□□□ 1.54
GDF7-201ENST00000272224 FKBP8Q14318 412 aa24.58■■□□□ 1.53
GDF7-201ENST00000272224 ZNF326Q5BKZ1 582 aaKnown RBP24.58■■□□□ 1.53
GDF7-201ENST00000272224 CCDC180Q9P1Z9 1646 aa24.54■■□□□ 1.52
GDF7-201ENST00000272224 ANP32EQ9BTT0 268 aa24.51■■□□□ 1.51
GDF7-201ENST00000272224 TNNT2P45379 298 aaPredicted RBP24.47■■□□□ 1.51
GDF7-201ENST00000272224 NBR1Q14596 966 aa24.43■■□□□ 1.5
GDF7-201ENST00000272224 TONSLQ96HA7 1378 aa24.42■■□□□ 1.5
GDF7-201ENST00000272224 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.4■■□□□ 1.5
GDF7-201ENST00000272224 CCDC136Q96JN2 1154 aa24.39■■□□□ 1.5
GDF7-201ENST00000272224 DDRGK1Q96HY6 314 aa24.39■■□□□ 1.49
GDF7-201ENST00000272224 HNRNPUQ00839 825 aaKnown RBP eCLIP24.36■■□□□ 1.49
GDF7-201ENST00000272224 BECN1Q14457 450 aa24.31■■□□□ 1.48
GDF7-201ENST00000272224 TRIM44Q96DX7 344 aaPredicted RBP24.26■■□□□ 1.47
GDF7-201ENST00000272224 SCAF1Q9H7N4 1312 aaKnown RBP24.26■■□□□ 1.47
GDF7-201ENST00000272224 BCL11AQ9H165 835 aa24.25■■□□□ 1.47
GDF7-201ENST00000272224 SLC24A1O60721 1099 aa24.24■■□□□ 1.47
GDF7-201ENST00000272224 ERICH6BQ5W0A0 696 aa24.21■■□□□ 1.47
GDF7-201ENST00000272224 GOLGA6L22H0YM25 854 aa24.17■■□□□ 1.46
GDF7-201ENST00000272224 MYH16Q9H6N6 1097 aa24.1■■□□□ 1.45
GDF7-201ENST00000272224 FAM9BQ8IZU0 186 aa24.07■■□□□ 1.44
GDF7-201ENST00000272224 TMC1Q8TDI8 760 aa24.06■■□□□ 1.44
GDF7-201ENST00000272224 NCLP19338 710 aaKnown RBP24.06■■□□□ 1.44
GDF7-201ENST00000272224 ARXQ96QS3 562 aa24.05■■□□□ 1.44
GDF7-201ENST00000272224 PPM1GO15355 546 aaPredicted RBP24.05■■□□□ 1.44
GDF7-201ENST00000272224 CDK11BP21127 795 aaKnown RBP24.05■■□□□ 1.44
GDF7-201ENST00000272224 DDX10Q13206 875 aaKnown RBP24■■□□□ 1.43
GDF7-201ENST00000272224 WDR43Q15061 677 aaKnown RBP eCLIP23.98■■□□□ 1.43
GDF7-201ENST00000272224 CSRNP3Q8WYN3 585 aa23.98■■□□□ 1.43
GDF7-201ENST00000272224 MRS2Q9HD23 443 aa23.96■■□□□ 1.43
GDF7-201ENST00000272224 PTMAP06454 111 aaKnown RBP23.9■■□□□ 1.42
GDF7-201ENST00000272224 NAP1L5Q96NT1 182 aaPredicted RBP23.87■■□□□ 1.41
GDF7-201ENST00000272224 CASC1Q6TDU7 716 aa23.83■■□□□ 1.41
GDF7-201ENST00000272224 MIER1Q8N108 512 aa23.83■■□□□ 1.4
GDF7-201ENST00000272224 ZRSR1Q15695 479 aaKnown RBP23.82■■□□□ 1.4
GDF7-201ENST00000272224 NOP58Q9Y2X3 529 aaKnown RBP23.82■■□□□ 1.4
GDF7-201ENST00000272224 DNTTIP2Q5QJE6 756 aaKnown RBP23.81■■□□□ 1.4
GDF7-201ENST00000272224 GOLGA6L6A8MZA4 724 aa23.79■■□□□ 1.4
GDF7-201ENST00000272224 CHAF1AQ13111 956 aaPredicted RBP23.74■■□□□ 1.39
GDF7-201ENST00000272224 SCRIBQ14160 1630 aa23.72■■□□□ 1.39
GDF7-201ENST00000272224 L1TD1Q5T7N2 865 aaKnown RBP23.72■■□□□ 1.39
GDF7-201ENST00000272224 NRDCO43847 1150 aa23.69■■□□□ 1.38
GDF7-201ENST00000272224 ZNF777Q9ULD5 760 aaPredicted RBP23.69■■□□□ 1.38
GDF7-201ENST00000272224 EIF4G2P78344 907 aaKnown RBP eCLIP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms