RNA–Protein interactions for RNA: ENST00000378609.8

GNB1-201, Transcript of G protein subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNB1, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNB1-201ENST00000378609 NISCHQ9Y2I1 1504 aa41.64■■■■■ 4.26
GNB1-201ENST00000378609 SHROOM4Q9ULL8 1493 aa35.99■■■■□ 3.35
GNB1-201ENST00000378609 DCAF8L2P0C7V8 631 aa35.98■■■■□ 3.35
GNB1-201ENST00000378609 CCDC180Q9P1Z9 1646 aa35.23■■■■□ 3.23
GNB1-201ENST00000378609 SUPT5HO00267 1087 aaKnown RBP35.02■■■■□ 3.2
GNB1-201ENST00000378609 ZCCHC6Q5VYS8 1495 aaKnown RBP34.98■■■■□ 3.19
GNB1-201ENST00000378609 ABCC9O60706 1549 aa34.22■■■■□ 3.07
GNB1-201ENST00000378609 DCAF1Q9Y4B6 1507 aa33.72■■■□□ 2.99
GNB1-201ENST00000378609 SCRIBQ14160 1630 aa33.64■■■□□ 2.98
GNB1-201ENST00000378609 CHIC1Q5VXU3 224 aa33.28■■■□□ 2.92
GNB1-201ENST00000378609 NACADO15069 1562 aa32.97■■■□□ 2.87
GNB1-201ENST00000378609 PABPN1Q86U42 306 aaKnown RBP eCLIP32.93■■■□□ 2.869e-8■■□□□ 11.5
GNB1-201ENST00000378609 MYO15BQ96JP2 1530 aa32.91■■■□□ 2.86
GNB1-201ENST00000378609 RSF1Q96T23 1441 aaPredicted RBP32.89■■■□□ 2.86
GNB1-201ENST00000378609 CECR2Q9BXF3 1484 aa32.89■■■□□ 2.86
GNB1-201ENST00000378609 RB1CC1Q8TDY2 1594 aa32.7■■■□□ 2.82
GNB1-201ENST00000378609 LOC105371045A0A1W2PR82 267 aa32.66■■■□□ 2.82
GNB1-201ENST00000378609 EHMT2Q96KQ7 1210 aa32.66■■■□□ 2.82
GNB1-201ENST00000378609 FAM9AQ8IZU1 332 aaPredicted RBP32.55■■■□□ 2.8
GNB1-201ENST00000378609 MROH2BQ7Z745 1585 aa32.54■■■□□ 2.8
GNB1-201ENST00000378609 TRIM41Q8WV44 630 aa32.39■■■□□ 2.78
GNB1-201ENST00000378609 WIZO95785 1651 aa32.3■■■□□ 2.76
GNB1-201ENST00000378609 UNC13AQ9UPW8 1703 aa32.1■■■□□ 2.73
GNB1-201ENST00000378609 BAZ1AQ9NRL2 1556 aaPredicted RBP31.97■■■□□ 2.71
GNB1-201ENST00000378609 PCGF6Q9BYE7 350 aa31.91■■■□□ 2.7
GNB1-201ENST00000378609 BICRAQ9NZM4 1560 aa31.87■■■□□ 2.69
GNB1-201ENST00000378609 SMARCA4P51532 1647 aa31.79■■■□□ 2.68
GNB1-201ENST00000378609 CCDC88BA6NC98 1476 aa31.68■■■□□ 2.66
GNB1-201ENST00000378609 PPARGC1BQ86YN6 1023 aaKnown RBP31.56■■■□□ 2.64
GNB1-201ENST00000378609 ABCC8Q09428 1581 aa31.53■■■□□ 2.64
GNB1-201ENST00000378609 TOP2AP11388 1531 aaKnown RBP31.52■■■□□ 2.64
GNB1-201ENST00000378609 SMARCA2P51531 1590 aa31.42■■■□□ 2.62
GNB1-201ENST00000378609 TTBK1Q5TCY1 1321 aaPredicted RBP31.31■■■□□ 2.6
GNB1-201ENST00000378609 ATAD2BQ9ULI0 1458 aa31.31■■■□□ 2.6
GNB1-201ENST00000378609 BAZ1BQ9UIG0 1483 aaKnown RBP31.25■■■□□ 2.59
GNB1-201ENST00000378609 SOGA1O94964 1423 aa31.18■■■□□ 2.58
GNB1-201ENST00000378609 RANGAP1P46060 587 aaPredicted RBP31.16■■■□□ 2.58
GNB1-201ENST00000378609 UBTFP17480 764 aaKnown RBP31.11■■■□□ 2.57
GNB1-201ENST00000378609 EIF4G1Q04637 1599 aaKnown RBP31.1■■■□□ 2.57
GNB1-201ENST00000378609 RUSC2Q8N2Y8 1516 aa31.09■■■□□ 2.57
GNB1-201ENST00000378609 TRIM26Q12899 539 aaPredicted RBP31.03■■■□□ 2.56
GNB1-201ENST00000378609 HRCP23327 699 aa30.99■■■□□ 2.55
GNB1-201ENST00000378609 WRNQ14191 1432 aaPredicted RBP eCLIP30.96■■■□□ 2.554e-6■□□□□ 10.4
GNB1-201ENST00000378609 CSRNP3Q8WYN3 585 aa30.95■■■□□ 2.55
GNB1-201ENST00000378609 PEG3Q9GZU2 1588 aa30.91■■■□□ 2.54
GNB1-201ENST00000378609 SYNJ1O43426 1573 aa30.71■■■□□ 2.51
GNB1-201ENST00000378609 NCAPD3P42695 1498 aa30.68■■■□□ 2.5
GNB1-201ENST00000378609 DNAJC5BQ9UF47 199 aa30.63■■■□□ 2.49
GNB1-201ENST00000378609 CEP162Q5TB80 1403 aa30.57■■■□□ 2.48
GNB1-201ENST00000378609 CC2D2AQ9P2K1 1620 aa30.42■■■□□ 2.46
GNB1-201ENST00000378609 HMGXB3Q12766 1538 aa30.41■■■□□ 2.46
GNB1-201ENST00000378609 TNIKQ9UKE5 1360 aa30.41■■■□□ 2.46
GNB1-201ENST00000378609 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.38■■■□□ 2.45
GNB1-201ENST00000378609 GOLGA3Q08378 1498 aa30.34■■■□□ 2.45
GNB1-201ENST00000378609 EEA1Q15075 1411 aa30.34■■■□□ 2.45
GNB1-201ENST00000378609 RAPGEF2Q9Y4G8 1499 aa30.34■■■□□ 2.45
GNB1-201ENST00000378609 CFTRP13569 1480 aa30.3■■■□□ 2.44
GNB1-201ENST00000378609 CADPSQ9ULU8 1353 aa30.27■■■□□ 2.44
GNB1-201ENST00000378609 CUX1P39880 1505 aa30.26■■■□□ 2.44
GNB1-201ENST00000378609 NESP48681 1621 aa30.23■■■□□ 2.43
GNB1-201ENST00000378609 CEP164Q9UPV0 1460 aa30.21■■■□□ 2.43
GNB1-201ENST00000378609 TOP2BQ02880 1626 aa30.19■■■□□ 2.42
GNB1-201ENST00000378609 CLIP1P30622 1438 aa30.18■■■□□ 2.42
GNB1-201ENST00000378609 APLP2Q06481 763 aa30.13■■■□□ 2.41
GNB1-201ENST00000378609 CCER1Q8TC90 406 aaPredicted RBP30.13■■■□□ 2.41
GNB1-201ENST00000378609 HNRNPUL2Q1KMD3 747 aaKnown RBP30.11■■■□□ 2.41
GNB1-201ENST00000378609 P3H3Q8IVL6 736 aa30.04■■■□□ 2.4
GNB1-201ENST00000378609 CUX2O14529 1486 aa30.03■■■□□ 2.4
GNB1-201ENST00000378609 KIF27Q86VH2 1401 aa30.03■■■□□ 2.4
GNB1-201ENST00000378609 FANCD2Q9BXW9 1451 aa29.98■■■□□ 2.39
GNB1-201ENST00000378609 ATP1B4Q9UN42 357 aaPredicted RBP29.96■■■□□ 2.39
GNB1-201ENST00000378609 BIVM-ERCC5R4GMW8 1640 aa29.93■■■□□ 2.38
GNB1-201ENST00000378609 FGD5Q6ZNL6 1462 aa29.92■■■□□ 2.38
GNB1-201ENST00000378609 RAD54L2Q9Y4B4 1467 aa29.92■■■□□ 2.38
GNB1-201ENST00000378609 KIF21BO75037 1637 aa29.9■■■□□ 2.38
GNB1-201ENST00000378609 IGF1RP08069 1367 aa29.86■■■□□ 2.37
GNB1-201ENST00000378609 PRXQ9BXM0 1461 aa29.84■■■□□ 2.37
GNB1-201ENST00000378609 KANK4Q5T7N3 995 aaPredicted RBP29.82■■■□□ 2.37
GNB1-201ENST00000378609 ZEB1P37275 1124 aaPredicted RBP29.79■■■□□ 2.36
GNB1-201ENST00000378609 VPS8Q8N3P4 1428 aa29.78■■■□□ 2.36
GNB1-201ENST00000378609 CARMIL1Q5VZK9 1371 aa29.77■■■□□ 2.36
GNB1-201ENST00000378609 ITGAEP38570 1179 aa29.77■■■□□ 2.36
GNB1-201ENST00000378609 TDRD9Q8NDG6 1382 aaKnown RBP29.76■■■□□ 2.35
GNB1-201ENST00000378609 ARAP1Q96P48 1450 aa29.66■■■□□ 2.34
GNB1-201ENST00000378609 POLA1P09884 1462 aaPredicted RBP29.63■■■□□ 2.33
GNB1-201ENST00000378609 TOPBP1Q92547 1522 aa29.63■■■□□ 2.33
GNB1-201ENST00000378609 URB2Q14146 1524 aaKnown RBP29.54■■■□□ 2.32
GNB1-201ENST00000378609 ERICH3Q5RHP9 1530 aa29.54■■■□□ 2.32
GNB1-201ENST00000378609 ARHGAP35Q9NRY4 1499 aa29.51■■■□□ 2.31
GNB1-201ENST00000378609 PRDM2Q13029 1718 aa29.49■■■□□ 2.31
GNB1-201ENST00000378609 PDS5BQ9NTI5 1447 aa29.49■■■□□ 2.31
GNB1-201ENST00000378609 ARID3CA6NKF2 412 aa29.46■■■□□ 2.31
GNB1-201ENST00000378609 DNMBPQ6XZF7 1577 aa29.45■■■□□ 2.3
GNB1-201ENST00000378609 FHOD3Q2V2M9 1422 aa29.36■■■□□ 2.29
GNB1-201ENST00000378609 LAMC3Q9Y6N6 1575 aa29.36■■■□□ 2.29
GNB1-201ENST00000378609 ABCA10Q8WWZ4 1543 aa29.33■■■□□ 2.29
GNB1-201ENST00000378609 AQRO60306 1485 aaKnown RBP eCLIP29.32■■■□□ 2.287e-7■■■■□ 25.8
GNB1-201ENST00000378609 FAM50AQ14320 339 aaKnown RBP29.31■■■□□ 2.28
GNB1-201ENST00000378609 KIF21AQ7Z4S6 1674 aa29.29■■■□□ 2.28
GNB1-201ENST00000378609 FBLN2P98095 1184 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms