RNA–Protein interactions for RNA: ENST00000597330.1

LETM1P2-201, Transcript of leucine zipper and EF-hand containing transmembrane protein 1 pseudogene 2, humanhuman

BASIC

Gene LETM1P2, Length 2,178 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1P2-201ENST00000597330 NISCHQ9Y2I1 1504 aa37.44■■■■□ 3.58
LETM1P2-201ENST00000597330 CCDC180Q9P1Z9 1646 aa32.76■■■□□ 2.84
LETM1P2-201ENST00000597330 HRCP23327 699 aa31.54■■■□□ 2.64
LETM1P2-201ENST00000597330 ZCCHC6Q5VYS8 1495 aaKnown RBP31.38■■■□□ 2.61
LETM1P2-201ENST00000597330 ABCC9O60706 1549 aa31.29■■■□□ 2.6
LETM1P2-201ENST00000597330 PELP1Q8IZL8 1130 aaKnown RBP31.13■■■□□ 2.57
LETM1P2-201ENST00000597330 DCAF8L2P0C7V8 631 aa31.1■■■□□ 2.57
LETM1P2-201ENST00000597330 DCAF1Q9Y4B6 1507 aa30.93■■■□□ 2.54
LETM1P2-201ENST00000597330 SHROOM4Q9ULL8 1493 aa30.71■■■□□ 2.51
LETM1P2-201ENST00000597330 MYO15BQ96JP2 1530 aa30.66■■■□□ 2.5
LETM1P2-201ENST00000597330 NACADO15069 1562 aa30.59■■■□□ 2.49
LETM1P2-201ENST00000597330 PPARGC1BQ86YN6 1023 aaKnown RBP30.58■■■□□ 2.49
LETM1P2-201ENST00000597330 PCGF6Q9BYE7 350 aa30.5■■■□□ 2.47
LETM1P2-201ENST00000597330 SUPT5HO00267 1087 aaKnown RBP30.42■■■□□ 2.46
LETM1P2-201ENST00000597330 RB1CC1Q8TDY2 1594 aa30.41■■■□□ 2.46
LETM1P2-201ENST00000597330 SCRIBQ14160 1630 aa30.13■■■□□ 2.41
LETM1P2-201ENST00000597330 MYT1Q01538 1121 aa30.11■■■□□ 2.41
LETM1P2-201ENST00000597330 CHIC1Q5VXU3 224 aa30.07■■■□□ 2.4
LETM1P2-201ENST00000597330 SCAF1Q9H7N4 1312 aaKnown RBP29.92■■■□□ 2.38
LETM1P2-201ENST00000597330 UNC13AQ9UPW8 1703 aa29.78■■■□□ 2.36
LETM1P2-201ENST00000597330 ZEB1P37275 1124 aaPredicted RBP29.66■■■□□ 2.34
LETM1P2-201ENST00000597330 TRIM26Q12899 539 aaPredicted RBP29.66■■■□□ 2.34
LETM1P2-201ENST00000597330 BICRAQ9NZM4 1560 aa29.49■■■□□ 2.31
LETM1P2-201ENST00000597330 PABPN1Q86U42 306 aaKnown RBP eCLIP29.47■■■□□ 2.31
LETM1P2-201ENST00000597330 LOC105371045A0A1W2PR82 267 aa29.2■■■□□ 2.27
LETM1P2-201ENST00000597330 ACIN1Q9UKV3 1341 aaKnown RBP29.17■■■□□ 2.26
LETM1P2-201ENST00000597330 CECR2Q9BXF3 1484 aa29.13■■■□□ 2.25
LETM1P2-201ENST00000597330 NEUROD1Q13562 356 aa28.96■■■□□ 2.23
LETM1P2-201ENST00000597330 RSF1Q96T23 1441 aaPredicted RBP28.94■■■□□ 2.22
LETM1P2-201ENST00000597330 BAZ1AQ9NRL2 1556 aaPredicted RBP28.93■■■□□ 2.22
LETM1P2-201ENST00000597330 MROH2BQ7Z745 1585 aa28.92■■■□□ 2.22
LETM1P2-201ENST00000597330 SMARCA4P51532 1647 aa28.84■■■□□ 2.21
LETM1P2-201ENST00000597330 GTF3C3Q9Y5Q9 886 aa28.83■■■□□ 2.21
LETM1P2-201ENST00000597330 CENPBP07199 599 aaPredicted RBP28.78■■■□□ 2.2
LETM1P2-201ENST00000597330 WIZO95785 1651 aa28.67■■■□□ 2.18
LETM1P2-201ENST00000597330 EIF4G1Q04637 1599 aaKnown RBP28.63■■■□□ 2.17
LETM1P2-201ENST00000597330 PEG3Q9GZU2 1588 aa28.47■■■□□ 2.15
LETM1P2-201ENST00000597330 ATAD2BQ9ULI0 1458 aa28.44■■■□□ 2.14
LETM1P2-201ENST00000597330 DIEXFQ68CQ4 756 aaKnown RBP28.43■■■□□ 2.14
LETM1P2-201ENST00000597330 SMARCA2P51531 1590 aa28.42■■■□□ 2.14
LETM1P2-201ENST00000597330 TTBK1Q5TCY1 1321 aaPredicted RBP28.41■■■□□ 2.14
LETM1P2-201ENST00000597330 TRIM41Q8WV44 630 aa28.37■■■□□ 2.13
LETM1P2-201ENST00000597330 TOP2AP11388 1531 aaKnown RBP28.36■■■□□ 2.13
LETM1P2-201ENST00000597330 CC2D2AQ9P2K1 1620 aa28.29■■■□□ 2.12
LETM1P2-201ENST00000597330 BAZ1BQ9UIG0 1483 aaKnown RBP28.28■■■□□ 2.12
LETM1P2-201ENST00000597330 NCAPD3P42695 1498 aa28.23■■■□□ 2.11
LETM1P2-201ENST00000597330 CCER1Q8TC90 406 aaPredicted RBP28.17■■■□□ 2.1
LETM1P2-201ENST00000597330 HMGXB3Q12766 1538 aa28.16■■■□□ 2.1
LETM1P2-201ENST00000597330 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.13■■■□□ 2.09
LETM1P2-201ENST00000597330 CCDC88BA6NC98 1476 aa28.08■■■□□ 2.09
LETM1P2-201ENST00000597330 FAM9AQ8IZU1 332 aaPredicted RBP28.05■■■□□ 2.08
LETM1P2-201ENST00000597330 ZNF316A6NFI3 1004 aaPredicted RBP27.86■■■□□ 2.05
LETM1P2-201ENST00000597330 DNAJC5BQ9UF47 199 aa27.85■■■□□ 2.05
LETM1P2-201ENST00000597330 BCL11AQ9H165 835 aa27.82■■■□□ 2.04
LETM1P2-201ENST00000597330 YTHDC1Q96MU7 727 aaKnown RBP27.79■■■□□ 2.04
LETM1P2-201ENST00000597330 EHMT2Q96KQ7 1210 aa27.71■■■□□ 2.03
LETM1P2-201ENST00000597330 ANP32EQ9BTT0 268 aa27.71■■■□□ 2.03
LETM1P2-201ENST00000597330 CLSPNQ9HAW4 1339 aa27.71■■■□□ 2.03
LETM1P2-201ENST00000597330 MIER1Q8N108 512 aa27.61■■■□□ 2.01
LETM1P2-201ENST00000597330 CFTRP13569 1480 aa27.53■■■□□ 2
LETM1P2-201ENST00000597330 WRNQ14191 1432 aaPredicted RBP eCLIP27.53■■■□□ 2
LETM1P2-201ENST00000597330 CADPSQ9ULU8 1353 aa27.51■■□□□ 1.99
LETM1P2-201ENST00000597330 SUPT16HQ9Y5B9 1047 aaKnown RBP27.44■■□□□ 1.98
LETM1P2-201ENST00000597330 TSHZ2Q9NRE2 1034 aa27.42■■□□□ 1.98
LETM1P2-201ENST00000597330 ABCC8Q09428 1581 aa27.4■■□□□ 1.98
LETM1P2-201ENST00000597330 NESP48681 1621 aa27.37■■□□□ 1.97
LETM1P2-201ENST00000597330 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
LETM1P2-201ENST00000597330 LAMC3Q9Y6N6 1575 aa27.32■■□□□ 1.96
LETM1P2-201ENST00000597330 CSRNP3Q8WYN3 585 aa27.29■■□□□ 1.96
LETM1P2-201ENST00000597330 CEP162Q5TB80 1403 aa27.24■■□□□ 1.95
LETM1P2-201ENST00000597330 TNIKQ9UKE5 1360 aa27.22■■□□□ 1.95
LETM1P2-201ENST00000597330 FANCD2Q9BXW9 1451 aa27.21■■□□□ 1.95
LETM1P2-201ENST00000597330 EEA1Q15075 1411 aa27.17■■□□□ 1.94
LETM1P2-201ENST00000597330 SYNJ1O43426 1573 aa27.15■■□□□ 1.94
LETM1P2-201ENST00000597330 PDS5BQ9NTI5 1447 aa27.14■■□□□ 1.93
LETM1P2-201ENST00000597330 SOGA1O94964 1423 aa27.06■■□□□ 1.92
LETM1P2-201ENST00000597330 CEP164Q9UPV0 1460 aa27.06■■□□□ 1.92
LETM1P2-201ENST00000597330 CUX1P39880 1505 aa27.06■■□□□ 1.92
LETM1P2-201ENST00000597330 TOP2BQ02880 1626 aa27.05■■□□□ 1.92
LETM1P2-201ENST00000597330 KIF21AQ7Z4S6 1674 aa27.03■■□□□ 1.92
LETM1P2-201ENST00000597330 BIVM-ERCC5R4GMW8 1640 aa27.03■■□□□ 1.92
LETM1P2-201ENST00000597330 GOLGA3Q08378 1498 aa26.95■■□□□ 1.9
LETM1P2-201ENST00000597330 UBTFP17480 764 aaKnown RBP26.93■■□□□ 1.9
LETM1P2-201ENST00000597330 DNMBPQ6XZF7 1577 aa26.9■■□□□ 1.9
LETM1P2-201ENST00000597330 PRKCSHP14314 528 aaPredicted RBP26.9■■□□□ 1.9
LETM1P2-201ENST00000597330 URB2Q14146 1524 aaKnown RBP26.88■■□□□ 1.89
LETM1P2-201ENST00000597330 TOPBP1Q92547 1522 aa26.88■■□□□ 1.89
LETM1P2-201ENST00000597330 RUSC2Q8N2Y8 1516 aa26.87■■□□□ 1.89
LETM1P2-201ENST00000597330 ERCC6Q03468 1493 aa26.86■■□□□ 1.89
LETM1P2-201ENST00000597330 FGD5Q6ZNL6 1462 aa26.82■■□□□ 1.88
LETM1P2-201ENST00000597330 MRC2Q9UBG0 1479 aa26.81■■□□□ 1.88
LETM1P2-201ENST00000597330 HNRNPUL2Q1KMD3 747 aaKnown RBP26.74■■□□□ 1.87
LETM1P2-201ENST00000597330 POLA1P09884 1462 aaPredicted RBP26.72■■□□□ 1.87
LETM1P2-201ENST00000597330 KIF21BO75037 1637 aa26.72■■□□□ 1.87
LETM1P2-201ENST00000597330 RBM19Q9Y4C8 960 aaKnown RBP26.72■■□□□ 1.87
LETM1P2-201ENST00000597330 WDR62O43379 1518 aa26.66■■□□□ 1.86
LETM1P2-201ENST00000597330 RAD54L2Q9Y4B4 1467 aa26.65■■□□□ 1.86
LETM1P2-201ENST00000597330 THOC2Q8NI27 1593 aaKnown RBP26.64■■□□□ 1.86
LETM1P2-201ENST00000597330 CLIP1P30622 1438 aa26.63■■□□□ 1.85
LETM1P2-201ENST00000597330 VPS8Q8N3P4 1428 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms