RNA–Protein interactions for RNA: ENST00000412845.1

NEFHP1-201, Transcript of neurofilament heavy pseudogene 1, humanhuman

BASIC

Gene NEFHP1, Length 2,629 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFHP1-201ENST00000412845 NISCHQ9Y2I1 1504 aa37.6■■■■□ 3.61
NEFHP1-201ENST00000412845 SHROOM4Q9ULL8 1493 aa32.66■■■□□ 2.82
NEFHP1-201ENST00000412845 SUPT5HO00267 1087 aaKnown RBP32.23■■■□□ 2.75
NEFHP1-201ENST00000412845 ZCCHC6Q5VYS8 1495 aaKnown RBP31.9■■■□□ 2.7
NEFHP1-201ENST00000412845 CCDC180Q9P1Z9 1646 aa31.64■■■□□ 2.65
NEFHP1-201ENST00000412845 MYO15BQ96JP2 1530 aa31.62■■■□□ 2.65
NEFHP1-201ENST00000412845 CHIC1Q5VXU3 224 aa31.53■■■□□ 2.64
NEFHP1-201ENST00000412845 HRCP23327 699 aa31.42■■■□□ 2.62
NEFHP1-201ENST00000412845 DCAF8L2P0C7V8 631 aa31.23■■■□□ 2.59
NEFHP1-201ENST00000412845 PCGF6Q9BYE7 350 aa31.12■■■□□ 2.57
NEFHP1-201ENST00000412845 PPARGC1BQ86YN6 1023 aaKnown RBP30.84■■■□□ 2.53
NEFHP1-201ENST00000412845 DCAF1Q9Y4B6 1507 aa30.72■■■□□ 2.51
NEFHP1-201ENST00000412845 LOC105371045A0A1W2PR82 267 aa30.72■■■□□ 2.51
NEFHP1-201ENST00000412845 TRIM26Q12899 539 aaPredicted RBP30.3■■■□□ 2.44
NEFHP1-201ENST00000412845 ABCC9O60706 1549 aa30.2■■■□□ 2.43
NEFHP1-201ENST00000412845 RSF1Q96T23 1441 aaPredicted RBP30.01■■■□□ 2.39
NEFHP1-201ENST00000412845 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
NEFHP1-201ENST00000412845 TRIM41Q8WV44 630 aa29.89■■■□□ 2.37
NEFHP1-201ENST00000412845 RB1CC1Q8TDY2 1594 aa29.83■■■□□ 2.37
NEFHP1-201ENST00000412845 FAM9AQ8IZU1 332 aaPredicted RBP29.8■■■□□ 2.36
NEFHP1-201ENST00000412845 ZEB1P37275 1124 aaPredicted RBP29.77■■■□□ 2.36
NEFHP1-201ENST00000412845 EHMT2Q96KQ7 1210 aa29.63■■■□□ 2.33
NEFHP1-201ENST00000412845 CECR2Q9BXF3 1484 aa29.42■■■□□ 2.3
NEFHP1-201ENST00000412845 SCAF1Q9H7N4 1312 aaKnown RBP29.35■■■□□ 2.29
NEFHP1-201ENST00000412845 MROH2BQ7Z745 1585 aa29.34■■■□□ 2.29
NEFHP1-201ENST00000412845 WIZO95785 1651 aa29.24■■■□□ 2.27
NEFHP1-201ENST00000412845 NACADO15069 1562 aa29.14■■■□□ 2.25
NEFHP1-201ENST00000412845 PELP1Q8IZL8 1130 aaKnown RBP29.12■■■□□ 2.25
NEFHP1-201ENST00000412845 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.11■■■□□ 2.25
NEFHP1-201ENST00000412845 EIF4G1Q04637 1599 aaKnown RBP29■■■□□ 2.23
NEFHP1-201ENST00000412845 CCER1Q8TC90 406 aaPredicted RBP28.99■■■□□ 2.23
NEFHP1-201ENST00000412845 BAZ1AQ9NRL2 1556 aaPredicted RBP28.99■■■□□ 2.23
NEFHP1-201ENST00000412845 ACIN1Q9UKV3 1341 aaKnown RBP28.82■■■□□ 2.2
NEFHP1-201ENST00000412845 NEUROD1Q13562 356 aa28.8■■■□□ 2.2
NEFHP1-201ENST00000412845 ABCC8Q09428 1581 aa28.8■■■□□ 2.2
NEFHP1-201ENST00000412845 TTBK1Q5TCY1 1321 aaPredicted RBP28.8■■■□□ 2.2
NEFHP1-201ENST00000412845 CCDC88BA6NC98 1476 aa28.76■■■□□ 2.2
NEFHP1-201ENST00000412845 DIEXFQ68CQ4 756 aaKnown RBP28.72■■■□□ 2.19
NEFHP1-201ENST00000412845 WRNQ14191 1432 aaPredicted RBP eCLIP28.71■■■□□ 2.19
NEFHP1-201ENST00000412845 CEP162Q5TB80 1403 aa28.68■■■□□ 2.18
NEFHP1-201ENST00000412845 TOP2AP11388 1531 aaKnown RBP28.67■■■□□ 2.18
NEFHP1-201ENST00000412845 SOGA1O94964 1423 aa28.62■■■□□ 2.17
NEFHP1-201ENST00000412845 SMARCA2P51531 1590 aa28.58■■■□□ 2.17
NEFHP1-201ENST00000412845 SMARCA4P51532 1647 aa28.55■■■□□ 2.16
NEFHP1-201ENST00000412845 GTF3C3Q9Y5Q9 886 aa28.55■■■□□ 2.16
NEFHP1-201ENST00000412845 TNIKQ9UKE5 1360 aa28.54■■■□□ 2.16
NEFHP1-201ENST00000412845 CENPBP07199 599 aaPredicted RBP28.49■■■□□ 2.15
NEFHP1-201ENST00000412845 RUSC2Q8N2Y8 1516 aa28.49■■■□□ 2.15
NEFHP1-201ENST00000412845 CSRNP3Q8WYN3 585 aa28.43■■■□□ 2.14
NEFHP1-201ENST00000412845 UBTFP17480 764 aaKnown RBP28.42■■■□□ 2.14
NEFHP1-201ENST00000412845 EEA1Q15075 1411 aa28.36■■■□□ 2.13
NEFHP1-201ENST00000412845 ZNF316A6NFI3 1004 aaPredicted RBP28.34■■■□□ 2.13
NEFHP1-201ENST00000412845 UNC13AQ9UPW8 1703 aa28.33■■■□□ 2.13
NEFHP1-201ENST00000412845 GOLGA3Q08378 1498 aa28.28■■■□□ 2.12
NEFHP1-201ENST00000412845 HNRNPUL2Q1KMD3 747 aaKnown RBP28.16■■■□□ 2.1
NEFHP1-201ENST00000412845 YTHDC1Q96MU7 727 aaKnown RBP28.16■■■□□ 2.1
NEFHP1-201ENST00000412845 MIER1Q8N108 512 aa28.08■■■□□ 2.09
NEFHP1-201ENST00000412845 CEP164Q9UPV0 1460 aa28.05■■■□□ 2.08
NEFHP1-201ENST00000412845 SYNJ1O43426 1573 aa28.05■■■□□ 2.08
NEFHP1-201ENST00000412845 CLIP1P30622 1438 aa28.02■■■□□ 2.08
NEFHP1-201ENST00000412845 KIF21BO75037 1637 aa28.02■■■□□ 2.08
NEFHP1-201ENST00000412845 PABPN1Q86U42 306 aaKnown RBP eCLIP27.98■■■□□ 2.07
NEFHP1-201ENST00000412845 VPS8Q8N3P4 1428 aa27.94■■■□□ 2.06
NEFHP1-201ENST00000412845 BICRAQ9NZM4 1560 aa27.9■■■□□ 2.06
NEFHP1-201ENST00000412845 PEG3Q9GZU2 1588 aa27.89■■■□□ 2.06
NEFHP1-201ENST00000412845 RAPGEF2Q9Y4G8 1499 aa27.87■■■□□ 2.05
NEFHP1-201ENST00000412845 RANGAP1P46060 587 aaPredicted RBP27.86■■■□□ 2.05
NEFHP1-201ENST00000412845 APLP2Q06481 763 aa27.82■■■□□ 2.04
NEFHP1-201ENST00000412845 BAZ1BQ9UIG0 1483 aaKnown RBP27.82■■■□□ 2.04
NEFHP1-201ENST00000412845 MYT1Q01538 1121 aa27.71■■■□□ 2.03
NEFHP1-201ENST00000412845 ATAD2BQ9ULI0 1458 aa27.69■■■□□ 2.02
NEFHP1-201ENST00000412845 DHX57Q6P158 1386 aaKnown RBP27.61■■■□□ 2.01
NEFHP1-201ENST00000412845 TOP2BQ02880 1626 aa27.58■■■□□ 2.01
NEFHP1-201ENST00000412845 CLSPNQ9HAW4 1339 aa27.53■■■□□ 2
NEFHP1-201ENST00000412845 KANK4Q5T7N3 995 aaPredicted RBP27.53■■■□□ 2
NEFHP1-201ENST00000412845 ARAP1Q96P48 1450 aa27.53■■■□□ 2
NEFHP1-201ENST00000412845 PRXQ9BXM0 1461 aa27.47■■□□□ 1.99
NEFHP1-201ENST00000412845 BIVM-ERCC5R4GMW8 1640 aa27.46■■□□□ 1.99
NEFHP1-201ENST00000412845 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
NEFHP1-201ENST00000412845 RRBP1Q9P2E9 1410 aaKnown RBP27.36■■□□□ 1.97
NEFHP1-201ENST00000412845 SUPT16HQ9Y5B9 1047 aaKnown RBP27.36■■□□□ 1.97
NEFHP1-201ENST00000412845 CUX1P39880 1505 aa27.26■■□□□ 1.95
NEFHP1-201ENST00000412845 CUX2O14529 1486 aa27.26■■□□□ 1.95
NEFHP1-201ENST00000412845 CCNB3Q8WWL7 1395 aa27.24■■□□□ 1.95
NEFHP1-201ENST00000412845 ITGAEP38570 1179 aa27.23■■□□□ 1.95
NEFHP1-201ENST00000412845 ARHGAP35Q9NRY4 1499 aa27.2■■□□□ 1.95
NEFHP1-201ENST00000412845 KIF27Q86VH2 1401 aa27.2■■□□□ 1.94
NEFHP1-201ENST00000412845 KCNH8Q96L42 1107 aa27.15■■□□□ 1.94
NEFHP1-201ENST00000412845 RAB3GAP2Q9H2M9 1393 aa27.1■■□□□ 1.93
NEFHP1-201ENST00000412845 MAPKBP1O60336 1514 aa27.09■■□□□ 1.93
NEFHP1-201ENST00000412845 TSHZ2Q9NRE2 1034 aa27.05■■□□□ 1.92
NEFHP1-201ENST00000412845 HMGXB3Q12766 1538 aa27.01■■□□□ 1.91
NEFHP1-201ENST00000412845 NCAPD3P42695 1498 aa27.01■■□□□ 1.91
NEFHP1-201ENST00000412845 TIAM1Q13009 1591 aa26.97■■□□□ 1.91
NEFHP1-201ENST00000412845 CFTRP13569 1480 aa26.97■■□□□ 1.91
NEFHP1-201ENST00000412845 WDR97A6NE52 1622 aa26.93■■□□□ 1.9
NEFHP1-201ENST00000412845 SETD5Q9C0A6 1442 aa26.93■■□□□ 1.9
NEFHP1-201ENST00000412845 SIN3AQ96ST3 1273 aa26.92■■□□□ 1.9
NEFHP1-201ENST00000412845 IGF1RP08069 1367 aa26.91■■□□□ 1.9
NEFHP1-201ENST00000412845 DDX10Q13206 875 aaKnown RBP26.9■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms