RNA–Protein interactions for RNA: ENST00000414183.6

EWSR1-208, Transcript of EWS RNA binding protein 1, humanhuman

APPRIS P4 TSL 2 BASIC

Gene EWSR1, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-208ENST00000414183 NISCHQ9Y2I1 1504 aa40.05■■■■■ 4
EWSR1-208ENST00000414183 CCDC180Q9P1Z9 1646 aa34.18■■■■□ 3.06
EWSR1-208ENST00000414183 ZCCHC6Q5VYS8 1495 aaKnown RBP33.96■■■■□ 3.03
EWSR1-208ENST00000414183 SHROOM4Q9ULL8 1493 aa33.77■■■■□ 3
EWSR1-208ENST00000414183 SUPT5HO00267 1087 aaKnown RBP33.13■■■□□ 2.89
EWSR1-208ENST00000414183 DCAF1Q9Y4B6 1507 aa33.06■■■□□ 2.88
EWSR1-208ENST00000414183 DCAF8L2P0C7V8 631 aa32.62■■■□□ 2.81
EWSR1-208ENST00000414183 CHIC1Q5VXU3 224 aa32.46■■■□□ 2.79
EWSR1-208ENST00000414183 MYO15BQ96JP2 1530 aa32.38■■■□□ 2.77
EWSR1-208ENST00000414183 ABCC9O60706 1549 aa32.08■■■□□ 2.73
EWSR1-208ENST00000414183 SCRIBQ14160 1630 aa31.76■■■□□ 2.67
EWSR1-208ENST00000414183 RSF1Q96T23 1441 aaPredicted RBP31.65■■■□□ 2.66
EWSR1-208ENST00000414183 HRCP23327 699 aa31.6■■■□□ 2.65
EWSR1-208ENST00000414183 NACADO15069 1562 aa31.51■■■□□ 2.64
EWSR1-208ENST00000414183 RB1CC1Q8TDY2 1594 aa31.41■■■□□ 2.62
EWSR1-208ENST00000414183 PCGF6Q9BYE7 350 aa31.35■■■□□ 2.61
EWSR1-208ENST00000414183 LOC105371045A0A1W2PR82 267 aa31.3■■■□□ 2.6
EWSR1-208ENST00000414183 CECR2Q9BXF3 1484 aa31.08■■■□□ 2.57
EWSR1-208ENST00000414183 MROH2BQ7Z745 1585 aa31.05■■■□□ 2.56
EWSR1-208ENST00000414183 TRIM41Q8WV44 630 aa30.99■■■□□ 2.55
EWSR1-208ENST00000414183 TRIM26Q12899 539 aaPredicted RBP30.93■■■□□ 2.54
EWSR1-208ENST00000414183 WIZO95785 1651 aa30.86■■■□□ 2.53
EWSR1-208ENST00000414183 BAZ1AQ9NRL2 1556 aaPredicted RBP30.85■■■□□ 2.53
EWSR1-208ENST00000414183 EIF4G1Q04637 1599 aaKnown RBP30.71■■■□□ 2.51
EWSR1-208ENST00000414183 PPARGC1BQ86YN6 1023 aaKnown RBP30.69■■■□□ 2.5
EWSR1-208ENST00000414183 FAM9AQ8IZU1 332 aaPredicted RBP30.54■■■□□ 2.48
EWSR1-208ENST00000414183 TOP2AP11388 1531 aaKnown RBP30.53■■■□□ 2.48
EWSR1-208ENST00000414183 SMARCA4P51532 1647 aa30.49■■■□□ 2.47
EWSR1-208ENST00000414183 UNC13AQ9UPW8 1703 aa30.4■■■□□ 2.46
EWSR1-208ENST00000414183 ZEB1P37275 1124 aaPredicted RBP30.38■■■□□ 2.45
EWSR1-208ENST00000414183 SMARCA2P51531 1590 aa30.32■■■□□ 2.44
EWSR1-208ENST00000414183 CCDC88BA6NC98 1476 aa30.28■■■□□ 2.44
EWSR1-208ENST00000414183 ABCC8Q09428 1581 aa30.14■■■□□ 2.42
EWSR1-208ENST00000414183 EHMT2Q96KQ7 1210 aa30.1■■■□□ 2.41
EWSR1-208ENST00000414183 BICRAQ9NZM4 1560 aa30.07■■■□□ 2.4
EWSR1-208ENST00000414183 PEG3Q9GZU2 1588 aa30.04■■■□□ 2.4
EWSR1-208ENST00000414183 WRNQ14191 1432 aaPredicted RBP eCLIP29.99■■■□□ 2.39
EWSR1-208ENST00000414183 EEA1Q15075 1411 aa29.99■■■□□ 2.39
EWSR1-208ENST00000414183 SOGA1O94964 1423 aa29.87■■■□□ 2.37
EWSR1-208ENST00000414183 TNIKQ9UKE5 1360 aa29.85■■■□□ 2.37
EWSR1-208ENST00000414183 CEP162Q5TB80 1403 aa29.84■■■□□ 2.37
EWSR1-208ENST00000414183 PABPN1Q86U42 306 aaKnown RBP eCLIP29.72■■■□□ 2.358e-9■□□□□ 10.7
EWSR1-208ENST00000414183 CSRNP3Q8WYN3 585 aa29.7■■■□□ 2.35
EWSR1-208ENST00000414183 RUSC2Q8N2Y8 1516 aa29.69■■■□□ 2.34
EWSR1-208ENST00000414183 GOLGA3Q08378 1498 aa29.68■■■□□ 2.34
EWSR1-208ENST00000414183 ATAD2BQ9ULI0 1458 aa29.65■■■□□ 2.34
EWSR1-208ENST00000414183 SYNJ1O43426 1573 aa29.59■■■□□ 2.33
EWSR1-208ENST00000414183 KIF21BO75037 1637 aa29.57■■■□□ 2.32
EWSR1-208ENST00000414183 BAZ1BQ9UIG0 1483 aaKnown RBP29.55■■■□□ 2.32
EWSR1-208ENST00000414183 CEP164Q9UPV0 1460 aa29.52■■■□□ 2.32
EWSR1-208ENST00000414183 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.5■■■□□ 2.31
EWSR1-208ENST00000414183 CCER1Q8TC90 406 aaPredicted RBP29.48■■■□□ 2.31
EWSR1-208ENST00000414183 UBTFP17480 764 aaKnown RBP29.45■■■□□ 2.31
EWSR1-208ENST00000414183 TOP2BQ02880 1626 aa29.31■■■□□ 2.28
EWSR1-208ENST00000414183 CLIP1P30622 1438 aa29.27■■■□□ 2.28
EWSR1-208ENST00000414183 BIVM-ERCC5R4GMW8 1640 aa29.24■■■□□ 2.27
EWSR1-208ENST00000414183 VPS8Q8N3P4 1428 aa29.22■■■□□ 2.27
EWSR1-208ENST00000414183 TTBK1Q5TCY1 1321 aaPredicted RBP29.21■■■□□ 2.27
EWSR1-208ENST00000414183 HMGXB3Q12766 1538 aa29.21■■■□□ 2.27
EWSR1-208ENST00000414183 RAPGEF2Q9Y4G8 1499 aa29.19■■■□□ 2.26
EWSR1-208ENST00000414183 NCAPD3P42695 1498 aa29.12■■■□□ 2.25
EWSR1-208ENST00000414183 ERICH3Q5RHP9 1530 aa29.1■■■□□ 2.25
EWSR1-208ENST00000414183 SCAF1Q9H7N4 1312 aaKnown RBP29.05■■■□□ 2.24
EWSR1-208ENST00000414183 PRXQ9BXM0 1461 aa29.03■■■□□ 2.24
EWSR1-208ENST00000414183 DIEXFQ68CQ4 756 aaKnown RBP28.98■■■□□ 2.23
EWSR1-208ENST00000414183 CUX1P39880 1505 aa28.94■■■□□ 2.22
EWSR1-208ENST00000414183 CFTRP13569 1480 aa28.9■■■□□ 2.22
EWSR1-208ENST00000414183 APLP2Q06481 763 aa28.86■■■□□ 2.21
EWSR1-208ENST00000414183 ARAP1Q96P48 1450 aa28.85■■■□□ 2.21
EWSR1-208ENST00000414183 ACIN1Q9UKV3 1341 aaKnown RBP28.84■■■□□ 2.21
EWSR1-208ENST00000414183 ZNF316A6NFI3 1004 aaPredicted RBP28.82■■■□□ 2.2
EWSR1-208ENST00000414183 PELP1Q8IZL8 1130 aaKnown RBP28.82■■■□□ 2.2
EWSR1-208ENST00000414183 KIF27Q86VH2 1401 aa28.81■■■□□ 2.2
EWSR1-208ENST00000414183 HNRNPUL2Q1KMD3 747 aaKnown RBP28.79■■■□□ 2.2
EWSR1-208ENST00000414183 PRDM2Q13029 1718 aa28.75■■■□□ 2.19
EWSR1-208ENST00000414183 NEUROD1Q13562 356 aa28.71■■■□□ 2.19
EWSR1-208ENST00000414183 CENPBP07199 599 aaPredicted RBP28.68■■■□□ 2.18
EWSR1-208ENST00000414183 CLSPNQ9HAW4 1339 aa28.62■■■□□ 2.17
EWSR1-208ENST00000414183 RANGAP1P46060 587 aaPredicted RBP28.61■■■□□ 2.17
EWSR1-208ENST00000414183 RRBP1Q9P2E9 1410 aaKnown RBP28.6■■■□□ 2.17
EWSR1-208ENST00000414183 ARHGAP35Q9NRY4 1499 aa28.57■■■□□ 2.16
EWSR1-208ENST00000414183 CUX2O14529 1486 aa28.51■■■□□ 2.16
EWSR1-208ENST00000414183 KANK4Q5T7N3 995 aaPredicted RBP28.5■■■□□ 2.15
EWSR1-208ENST00000414183 DHX57Q6P158 1386 aaKnown RBP28.49■■■□□ 2.15
EWSR1-208ENST00000414183 CADPSQ9ULU8 1353 aa28.48■■■□□ 2.15
EWSR1-208ENST00000414183 IGF1RP08069 1367 aa28.45■■■□□ 2.14
EWSR1-208ENST00000414183 MAP3K1Q13233 1512 aa28.43■■■□□ 2.14
EWSR1-208ENST00000414183 GTF3C3Q9Y5Q9 886 aa28.4■■■□□ 2.14
EWSR1-208ENST00000414183 FGD5Q6ZNL6 1462 aa28.38■■■□□ 2.13
EWSR1-208ENST00000414183 CCNB3Q8WWL7 1395 aa28.37■■■□□ 2.13
EWSR1-208ENST00000414183 TIAM1Q13009 1591 aa28.33■■■□□ 2.13
EWSR1-208ENST00000414183 MIER1Q8N108 512 aa28.31■■■□□ 2.12
EWSR1-208ENST00000414183 CARMIL1Q5VZK9 1371 aa28.31■■■□□ 2.12
EWSR1-208ENST00000414183 CC2D2AQ9P2K1 1620 aa28.23■■■□□ 2.11
EWSR1-208ENST00000414183 FANCD2Q9BXW9 1451 aa28.2■■■□□ 2.1
EWSR1-208ENST00000414183 LRRC9Q6ZRR7 1453 aa28.18■■■□□ 2.1
EWSR1-208ENST00000414183 DNMBPQ6XZF7 1577 aa28.18■■■□□ 2.1
EWSR1-208ENST00000414183 FHAD1B1AJZ9 1412 aa28.18■■■□□ 2.1
EWSR1-208ENST00000414183 CFAP43Q8NDM7 1665 aa28.18■■■□□ 2.1
EWSR1-208ENST00000414183 ABCA10Q8WWZ4 1543 aa28.14■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms