RNA–Protein interactions for RNA: ENST00000361036.10

GPAA1-202, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 1 (best) BASIC

Gene GPAA1, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-202ENST00000361036 NISCHQ9Y2I1 1504 aa46.9■■■■■ 5.1
GPAA1-202ENST00000361036 CCDC180Q9P1Z9 1646 aa40.89■■■■■ 4.14
GPAA1-202ENST00000361036 ABCC9O60706 1549 aa39.51■■■■□ 3.92
GPAA1-202ENST00000361036 ZCCHC6Q5VYS8 1495 aaKnown RBP39.39■■■■□ 3.9
GPAA1-202ENST00000361036 DCAF8L2P0C7V8 631 aa38.81■■■■□ 3.8
GPAA1-202ENST00000361036 DCAF1Q9Y4B6 1507 aa38.78■■■■□ 3.8
GPAA1-202ENST00000361036 MYO15BQ96JP2 1530 aa38.31■■■■□ 3.72
GPAA1-202ENST00000361036 NACADO15069 1562 aa38.25■■■■□ 3.71
GPAA1-202ENST00000361036 SHROOM4Q9ULL8 1493 aa38.25■■■■□ 3.71
GPAA1-202ENST00000361036 RB1CC1Q8TDY2 1594 aa38.18■■■■□ 3.7
GPAA1-202ENST00000361036 SCRIBQ14160 1630 aa37.63■■■■□ 3.61
GPAA1-202ENST00000361036 UNC13AQ9UPW8 1703 aa37.43■■■■□ 3.58
GPAA1-202ENST00000361036 PABPN1Q86U42 306 aaKnown RBP eCLIP37.09■■■■□ 3.536e-6■□□□□ 9.1
GPAA1-202ENST00000361036 BICRAQ9NZM4 1560 aa37■■■■□ 3.51
GPAA1-202ENST00000361036 SUPT5HO00267 1087 aaKnown RBP36.82■■■■□ 3.49
GPAA1-202ENST00000361036 CECR2Q9BXF3 1484 aa36.46■■■■□ 3.43
GPAA1-202ENST00000361036 RSF1Q96T23 1441 aaPredicted RBP36.41■■■■□ 3.42
GPAA1-202ENST00000361036 MROH2BQ7Z745 1585 aa36.25■■■■□ 3.39
GPAA1-202ENST00000361036 BAZ1AQ9NRL2 1556 aaPredicted RBP36.18■■■■□ 3.38
GPAA1-202ENST00000361036 SMARCA4P51532 1647 aa36.03■■■■□ 3.36
GPAA1-202ENST00000361036 EIF4G1Q04637 1599 aaKnown RBP35.99■■■■□ 3.35
GPAA1-202ENST00000361036 WIZO95785 1651 aa35.95■■■■□ 3.35
GPAA1-202ENST00000361036 CC2D2AQ9P2K1 1620 aa35.7■■■■□ 3.3
GPAA1-202ENST00000361036 PEG3Q9GZU2 1588 aa35.61■■■■□ 3.29
GPAA1-202ENST00000361036 TOP2AP11388 1531 aaKnown RBP35.55■■■■□ 3.28
GPAA1-202ENST00000361036 DNAJC5BQ9UF47 199 aa35.5■■■■□ 3.27
GPAA1-202ENST00000361036 ATAD2BQ9ULI0 1458 aa35.49■■■■□ 3.27
GPAA1-202ENST00000361036 SMARCA2P51531 1590 aa35.46■■■■□ 3.27
GPAA1-202ENST00000361036 CHIC1Q5VXU3 224 aa35.33■■■■□ 3.25
GPAA1-202ENST00000361036 BAZ1BQ9UIG0 1483 aaKnown RBP35.3■■■■□ 3.24
GPAA1-202ENST00000361036 NCAPD3P42695 1498 aa35.25■■■■□ 3.23
GPAA1-202ENST00000361036 CCDC88BA6NC98 1476 aa35.21■■■■□ 3.23
GPAA1-202ENST00000361036 HMGXB3Q12766 1538 aa35.19■■■■□ 3.22
GPAA1-202ENST00000361036 TRIM41Q8WV44 630 aa34.62■■■■□ 3.13
GPAA1-202ENST00000361036 ABCC8Q09428 1581 aa34.47■■■■□ 3.11
GPAA1-202ENST00000361036 NESP48681 1621 aa34.41■■■■□ 3.1
GPAA1-202ENST00000361036 CFTRP13569 1480 aa34.36■■■■□ 3.09
GPAA1-202ENST00000361036 CADPSQ9ULU8 1353 aa34.34■■■■□ 3.09
GPAA1-202ENST00000361036 LAMC3Q9Y6N6 1575 aa34.27■■■■□ 3.08
GPAA1-202ENST00000361036 WRNQ14191 1432 aaPredicted RBP eCLIP34.23■■■■□ 3.07
GPAA1-202ENST00000361036 PRDM2Q13029 1718 aa34.18■■■■□ 3.06
GPAA1-202ENST00000361036 SYNJ1O43426 1573 aa34.11■■■■□ 3.05
GPAA1-202ENST00000361036 KIF21AQ7Z4S6 1674 aa34.03■■■■□ 3.04
GPAA1-202ENST00000361036 FANCD2Q9BXW9 1451 aa34.02■■■■□ 3.04
GPAA1-202ENST00000361036 PDS5BQ9NTI5 1447 aa34.02■■■■□ 3.04
GPAA1-202ENST00000361036 ERCC6Q03468 1493 aa33.99■■■■□ 3.03
GPAA1-202ENST00000361036 LOC105371045A0A1W2PR82 267 aa33.98■■■■□ 3.03
GPAA1-202ENST00000361036 FAM9AQ8IZU1 332 aaPredicted RBP33.98■■■■□ 3.03
GPAA1-202ENST00000361036 TOP2BQ02880 1626 aa33.97■■■■□ 3.03
GPAA1-202ENST00000361036 BIVM-ERCC5R4GMW8 1640 aa33.94■■■■□ 3.02
GPAA1-202ENST00000361036 CEP164Q9UPV0 1460 aa33.92■■■■□ 3.02
GPAA1-202ENST00000361036 CUX1P39880 1505 aa33.88■■■■□ 3.01
GPAA1-202ENST00000361036 SOGA1O94964 1423 aa33.85■■■■□ 3.01
GPAA1-202ENST00000361036 EEA1Q15075 1411 aa33.75■■■□□ 2.99
GPAA1-202ENST00000361036 RUSC2Q8N2Y8 1516 aa33.74■■■□□ 2.99
GPAA1-202ENST00000361036 MRC2Q9UBG0 1479 aa33.67■■■□□ 2.98
GPAA1-202ENST00000361036 URB2Q14146 1524 aaKnown RBP33.64■■■□□ 2.98
GPAA1-202ENST00000361036 THOC2Q8NI27 1593 aaKnown RBP33.62■■■□□ 2.97
GPAA1-202ENST00000361036 CSRNP3Q8WYN3 585 aa33.6■■■□□ 2.97
GPAA1-202ENST00000361036 DNMBPQ6XZF7 1577 aa33.57■■■□□ 2.96
GPAA1-202ENST00000361036 TOPBP1Q92547 1522 aa33.56■■■□□ 2.96
GPAA1-202ENST00000361036 WDR62O43379 1518 aa33.5■■■□□ 2.95
GPAA1-202ENST00000361036 FGD5Q6ZNL6 1462 aa33.48■■■□□ 2.95
GPAA1-202ENST00000361036 EHMT2Q96KQ7 1210 aa33.48■■■□□ 2.95
GPAA1-202ENST00000361036 KIF27Q86VH2 1401 aa33.35■■■□□ 2.93
GPAA1-202ENST00000361036 POLA1P09884 1462 aaPredicted RBP33.34■■■□□ 2.93
GPAA1-202ENST00000361036 KIF21BO75037 1637 aa33.33■■■□□ 2.93
GPAA1-202ENST00000361036 GOLGA3Q08378 1498 aa33.29■■■□□ 2.92
GPAA1-202ENST00000361036 CUX2O14529 1486 aa33.26■■■□□ 2.92
GPAA1-202ENST00000361036 RAD54L2Q9Y4B4 1467 aa33.26■■■□□ 2.91
GPAA1-202ENST00000361036 TNIKQ9UKE5 1360 aa33.23■■■□□ 2.91
GPAA1-202ENST00000361036 ABCA10Q8WWZ4 1543 aa33.2■■■□□ 2.91
GPAA1-202ENST00000361036 PRXQ9BXM0 1461 aa33.18■■■□□ 2.9
GPAA1-202ENST00000361036 RAPGEF2Q9Y4G8 1499 aa33.15■■■□□ 2.9
GPAA1-202ENST00000361036 UBTFP17480 764 aaKnown RBP33.13■■■□□ 2.89
GPAA1-202ENST00000361036 IGF1RP08069 1367 aa33.11■■■□□ 2.89
GPAA1-202ENST00000361036 TARBP1Q13395 1621 aaKnown RBP33.1■■■□□ 2.89
GPAA1-202ENST00000361036 ERICH3Q5RHP9 1530 aa33.1■■■□□ 2.89
GPAA1-202ENST00000361036 WDR97A6NE52 1622 aa33.1■■■□□ 2.89
GPAA1-202ENST00000361036 IFT140Q96RY7 1462 aa33.09■■■□□ 2.89
GPAA1-202ENST00000361036 CEP162Q5TB80 1403 aa33.03■■■□□ 2.88
GPAA1-202ENST00000361036 ZNF608Q9ULD9 1512 aaPredicted RBP33■■■□□ 2.87
GPAA1-202ENST00000361036 TDRD9Q8NDG6 1382 aaKnown RBP32.99■■■□□ 2.87
GPAA1-202ENST00000361036 ABCA5Q8WWZ7 1642 aa32.93■■■□□ 2.86
GPAA1-202ENST00000361036 AQRO60306 1485 aaKnown RBP eCLIP32.92■■■□□ 2.862e-7■■■■■ 34.2
GPAA1-202ENST00000361036 EIF4G3O43432 1585 aaKnown RBP32.91■■■□□ 2.86
GPAA1-202ENST00000361036 CARMIL1Q5VZK9 1371 aa32.91■■■□□ 2.86
GPAA1-202ENST00000361036 GAPVD1Q14C86 1478 aa32.84■■■□□ 2.85
GPAA1-202ENST00000361036 CUL7Q14999 1698 aa32.8■■■□□ 2.84
GPAA1-202ENST00000361036 PBRM1Q86U86 1689 aa32.79■■■□□ 2.84
GPAA1-202ENST00000361036 CLIP1P30622 1438 aa32.76■■■□□ 2.84
GPAA1-202ENST00000361036 GRIN2BQ13224 1484 aa32.7■■■□□ 2.82
GPAA1-202ENST00000361036 SNAPC4Q5SXM2 1469 aa32.63■■■□□ 2.81
GPAA1-202ENST00000361036 RANGAP1P46060 587 aaPredicted RBP32.56■■■□□ 2.8
GPAA1-202ENST00000361036 ADAMTS12P58397 1594 aa32.51■■■□□ 2.8
GPAA1-202ENST00000361036 FBLN2P98095 1184 aa32.51■■■□□ 2.79
GPAA1-202ENST00000361036 MAGI1Q96QZ7 1491 aaPredicted RBP32.49■■■□□ 2.79
GPAA1-202ENST00000361036 FHAD1B1AJZ9 1412 aa32.49■■■□□ 2.79
GPAA1-202ENST00000361036 VPS8Q8N3P4 1428 aa32.49■■■□□ 2.79
GPAA1-202ENST00000361036 ARAP1Q96P48 1450 aa32.47■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms