RNA–Protein interactions for RNA: ENST00000332556.4

LAMP1-201, Transcript of lysosomal associated membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAMP1, Length 2,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP1-201ENST00000332556 NISCHQ9Y2I1 1504 aa39.72■■■■□ 3.95
LAMP1-201ENST00000332556 SHROOM4Q9ULL8 1493 aa34.37■■■■□ 3.09
LAMP1-201ENST00000332556 DCAF8L2P0C7V8 631 aa33.73■■■□□ 2.99
LAMP1-201ENST00000332556 CCDC180Q9P1Z9 1646 aa33.59■■■□□ 2.97
LAMP1-201ENST00000332556 SUPT5HO00267 1087 aaKnown RBP33.55■■■□□ 2.96
LAMP1-201ENST00000332556 ZCCHC6Q5VYS8 1495 aaKnown RBP33.5■■■□□ 2.95
LAMP1-201ENST00000332556 DCAF1Q9Y4B6 1507 aa32.25■■■□□ 2.75
LAMP1-201ENST00000332556 CHIC1Q5VXU3 224 aa32.23■■■□□ 2.75
LAMP1-201ENST00000332556 MYO15BQ96JP2 1530 aa32.13■■■□□ 2.73
LAMP1-201ENST00000332556 SCRIBQ14160 1630 aa31.96■■■□□ 2.71
LAMP1-201ENST00000332556 ABCC9O60706 1549 aa31.95■■■□□ 2.71
LAMP1-201ENST00000332556 LOC105371045A0A1W2PR82 267 aa31.56■■■□□ 2.64
LAMP1-201ENST00000332556 RSF1Q96T23 1441 aaPredicted RBP31.47■■■□□ 2.63
LAMP1-201ENST00000332556 HRCP23327 699 aa31.33■■■□□ 2.61
LAMP1-201ENST00000332556 CECR2Q9BXF3 1484 aa31.28■■■□□ 2.6
LAMP1-201ENST00000332556 PCGF6Q9BYE7 350 aa31.21■■■□□ 2.59
LAMP1-201ENST00000332556 NACADO15069 1562 aa31.2■■■□□ 2.59
LAMP1-201ENST00000332556 RB1CC1Q8TDY2 1594 aa31.19■■■□□ 2.58
LAMP1-201ENST00000332556 EHMT2Q96KQ7 1210 aa31.16■■■□□ 2.58
LAMP1-201ENST00000332556 FAM9AQ8IZU1 332 aaPredicted RBP31.13■■■□□ 2.57
LAMP1-201ENST00000332556 MROH2BQ7Z745 1585 aa31.05■■■□□ 2.56
LAMP1-201ENST00000332556 TRIM41Q8WV44 630 aa31.03■■■□□ 2.56
LAMP1-201ENST00000332556 PPARGC1BQ86YN6 1023 aaKnown RBP30.91■■■□□ 2.54
LAMP1-201ENST00000332556 WIZO95785 1651 aa30.89■■■□□ 2.54
LAMP1-201ENST00000332556 PABPN1Q86U42 306 aaKnown RBP eCLIP30.71■■■□□ 2.51
LAMP1-201ENST00000332556 UNC13AQ9UPW8 1703 aa30.49■■■□□ 2.47
LAMP1-201ENST00000332556 BAZ1AQ9NRL2 1556 aaPredicted RBP30.45■■■□□ 2.47
LAMP1-201ENST00000332556 TRIM26Q12899 539 aaPredicted RBP30.35■■■□□ 2.45
LAMP1-201ENST00000332556 SMARCA4P51532 1647 aa30.3■■■□□ 2.44
LAMP1-201ENST00000332556 ABCC8Q09428 1581 aa30.24■■■□□ 2.43
LAMP1-201ENST00000332556 CCDC88BA6NC98 1476 aa30.22■■■□□ 2.43
LAMP1-201ENST00000332556 TOP2AP11388 1531 aaKnown RBP30.16■■■□□ 2.42
LAMP1-201ENST00000332556 BICRAQ9NZM4 1560 aa30.13■■■□□ 2.41
LAMP1-201ENST00000332556 EIF4G1Q04637 1599 aaKnown RBP30.11■■■□□ 2.41
LAMP1-201ENST00000332556 SMARCA2P51531 1590 aa30.08■■■□□ 2.41
LAMP1-201ENST00000332556 TTBK1Q5TCY1 1321 aaPredicted RBP30.02■■■□□ 2.4
LAMP1-201ENST00000332556 SOGA1O94964 1423 aa29.9■■■□□ 2.38
LAMP1-201ENST00000332556 RUSC2Q8N2Y8 1516 aa29.84■■■□□ 2.37
LAMP1-201ENST00000332556 UBTFP17480 764 aaKnown RBP29.68■■■□□ 2.34
LAMP1-201ENST00000332556 ATAD2BQ9ULI0 1458 aa29.64■■■□□ 2.33
LAMP1-201ENST00000332556 ZEB1P37275 1124 aaPredicted RBP29.62■■■□□ 2.33
LAMP1-201ENST00000332556 CSRNP3Q8WYN3 585 aa29.61■■■□□ 2.33
LAMP1-201ENST00000332556 BAZ1BQ9UIG0 1483 aaKnown RBP29.57■■■□□ 2.32
LAMP1-201ENST00000332556 WRNQ14191 1432 aaPredicted RBP eCLIP29.56■■■□□ 2.32
LAMP1-201ENST00000332556 RANGAP1P46060 587 aaPredicted RBP29.56■■■□□ 2.32
LAMP1-201ENST00000332556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.54■■■□□ 2.32
LAMP1-201ENST00000332556 CEP162Q5TB80 1403 aa29.52■■■□□ 2.32
LAMP1-201ENST00000332556 PEG3Q9GZU2 1588 aa29.5■■■□□ 2.31
LAMP1-201ENST00000332556 SYNJ1O43426 1573 aa29.46■■■□□ 2.31
LAMP1-201ENST00000332556 TNIKQ9UKE5 1360 aa29.35■■■□□ 2.29
LAMP1-201ENST00000332556 SCAF1Q9H7N4 1312 aaKnown RBP29.33■■■□□ 2.29
LAMP1-201ENST00000332556 CCER1Q8TC90 406 aaPredicted RBP29.29■■■□□ 2.28
LAMP1-201ENST00000332556 GOLGA3Q08378 1498 aa29.24■■■□□ 2.27
LAMP1-201ENST00000332556 EEA1Q15075 1411 aa29.23■■■□□ 2.27
LAMP1-201ENST00000332556 RAPGEF2Q9Y4G8 1499 aa29.11■■■□□ 2.25
LAMP1-201ENST00000332556 CEP164Q9UPV0 1460 aa29.06■■■□□ 2.24
LAMP1-201ENST00000332556 CLIP1P30622 1438 aa29.02■■■□□ 2.24
LAMP1-201ENST00000332556 HNRNPUL2Q1KMD3 747 aaKnown RBP29■■■□□ 2.23
LAMP1-201ENST00000332556 PELP1Q8IZL8 1130 aaKnown RBP29■■■□□ 2.23
LAMP1-201ENST00000332556 NCAPD3P42695 1498 aa28.96■■■□□ 2.23
LAMP1-201ENST00000332556 TOP2BQ02880 1626 aa28.93■■■□□ 2.22
LAMP1-201ENST00000332556 KIF21BO75037 1637 aa28.92■■■□□ 2.22
LAMP1-201ENST00000332556 CUX1P39880 1505 aa28.87■■■□□ 2.21
LAMP1-201ENST00000332556 HMGXB3Q12766 1538 aa28.85■■■□□ 2.21
LAMP1-201ENST00000332556 APLP2Q06481 763 aa28.81■■■□□ 2.2
LAMP1-201ENST00000332556 NEUROD1Q13562 356 aa28.79■■■□□ 2.2
LAMP1-201ENST00000332556 BIVM-ERCC5R4GMW8 1640 aa28.77■■■□□ 2.2
LAMP1-201ENST00000332556 ACIN1Q9UKV3 1341 aaKnown RBP28.76■■■□□ 2.19
LAMP1-201ENST00000332556 VPS8Q8N3P4 1428 aa28.76■■■□□ 2.19
LAMP1-201ENST00000332556 CFTRP13569 1480 aa28.73■■■□□ 2.19
LAMP1-201ENST00000332556 DIEXFQ68CQ4 756 aaKnown RBP28.68■■■□□ 2.18
LAMP1-201ENST00000332556 KANK4Q5T7N3 995 aaPredicted RBP28.64■■■□□ 2.17
LAMP1-201ENST00000332556 PRXQ9BXM0 1461 aa28.63■■■□□ 2.17
LAMP1-201ENST00000332556 KIF27Q86VH2 1401 aa28.61■■■□□ 2.17
LAMP1-201ENST00000332556 GTF3C3Q9Y5Q9 886 aa28.56■■■□□ 2.16
LAMP1-201ENST00000332556 CC2D2AQ9P2K1 1620 aa28.55■■■□□ 2.16
LAMP1-201ENST00000332556 ARAP1Q96P48 1450 aa28.55■■■□□ 2.16
LAMP1-201ENST00000332556 CADPSQ9ULU8 1353 aa28.53■■■□□ 2.16
LAMP1-201ENST00000332556 CUX2O14529 1486 aa28.53■■■□□ 2.16
LAMP1-201ENST00000332556 ERICH3Q5RHP9 1530 aa28.46■■■□□ 2.15
LAMP1-201ENST00000332556 CENPBP07199 599 aaPredicted RBP28.45■■■□□ 2.14
LAMP1-201ENST00000332556 ITGAEP38570 1179 aa28.45■■■□□ 2.14
LAMP1-201ENST00000332556 P3H3Q8IVL6 736 aa28.45■■■□□ 2.14
LAMP1-201ENST00000332556 DNAJC5BQ9UF47 199 aa28.44■■■□□ 2.14
LAMP1-201ENST00000332556 NESP48681 1621 aa28.42■■■□□ 2.14
LAMP1-201ENST00000332556 FGD5Q6ZNL6 1462 aa28.42■■■□□ 2.14
LAMP1-201ENST00000332556 IGF1RP08069 1367 aa28.41■■■□□ 2.14
LAMP1-201ENST00000332556 ARHGAP35Q9NRY4 1499 aa28.35■■■□□ 2.13
LAMP1-201ENST00000332556 ATP1B4Q9UN42 357 aaPredicted RBP28.34■■■□□ 2.13
LAMP1-201ENST00000332556 RAD54L2Q9Y4B4 1467 aa28.32■■■□□ 2.12
LAMP1-201ENST00000332556 FANCD2Q9BXW9 1451 aa28.31■■■□□ 2.12
LAMP1-201ENST00000332556 CARMIL1Q5VZK9 1371 aa28.3■■■□□ 2.12
LAMP1-201ENST00000332556 YTHDC1Q96MU7 727 aaKnown RBP28.28■■■□□ 2.12
LAMP1-201ENST00000332556 ZNF316A6NFI3 1004 aaPredicted RBP28.27■■■□□ 2.12
LAMP1-201ENST00000332556 PRDM2Q13029 1718 aa28.27■■■□□ 2.12
LAMP1-201ENST00000332556 POLA1P09884 1462 aaPredicted RBP28.08■■■□□ 2.09
LAMP1-201ENST00000332556 DHX57Q6P158 1386 aaKnown RBP28.07■■■□□ 2.08
LAMP1-201ENST00000332556 TOPBP1Q92547 1522 aa28.07■■■□□ 2.08
LAMP1-201ENST00000332556 MIER1Q8N108 512 aa28.05■■■□□ 2.08
LAMP1-201ENST00000332556 TDRD9Q8NDG6 1382 aaKnown RBP28.03■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms