Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA4P78363 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.61■□□□□ 0.41
ABCA4P78363 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA4P78363 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
ABCA4P78363 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA4P78363 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA4P78363 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.61■□□□□ 0.41
ABCA4P78363 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA4P78363 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.61■□□□□ 0.41
ABCA4P78363 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA4P78363 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
ABCA4P78363 RN7SL850P-201ENST00000579959 291 ntBASIC17.61■□□□□ 0.41
ABCA4P78363 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA4P78363 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA4P78363 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ABCA4P78363 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.61■□□□□ 0.41
ABCA4P78363 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.6■□□□□ 0.41
ABCA4P78363 AC233702.5-201ENST00000584107 538 ntBASIC17.6■□□□□ 0.41
ABCA4P78363 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.6■□□□□ 0.41
ABCA4P78363 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC17.6■□□□□ 0.41
ABCA4P78363 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA4P78363 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA4P78363 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA4P78363 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA4P78363 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA4P78363 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA4P78363 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
ABCA4P78363 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.6■□□□□ 0.41
ABCA4P78363 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA4P78363 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.6■□□□□ 0.41
ABCA4P78363 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
ABCA4P78363 RARRES2P10-201ENST00000564312 460 ntBASIC17.6■□□□□ 0.41
ABCA4P78363 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA4P78363 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.6■□□□□ 0.41
ABCA4P78363 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ABCA4P78363 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC17.6■□□□□ 0.41
ABCA4P78363 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.59■□□□□ 0.41
ABCA4P78363 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.59■□□□□ 0.41
ABCA4P78363 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA4P78363 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ABCA4P78363 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA4P78363 RCN1P1-201ENST00000400413 996 ntBASIC17.59■□□□□ 0.41
ABCA4P78363 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.59■□□□□ 0.41
ABCA4P78363 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA4P78363 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
ABCA4P78363 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
ABCA4P78363 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA4P78363 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA4P78363 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
ABCA4P78363 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.59■□□□□ 0.41
ABCA4P78363 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.59■□□□□ 0.41
ABCA4P78363 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.59■□□□□ 0.41
ABCA4P78363 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
ABCA4P78363 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA4P78363 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ABCA4P78363 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC17.59■□□□□ 0.41
ABCA4P78363 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.58■□□□□ 0.41
ABCA4P78363 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
ABCA4P78363 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.41
ABCA4P78363 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
ABCA4P78363 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.58■□□□□ 0.4
ABCA4P78363 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ABCA4P78363 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ABCA4P78363 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.58■□□□□ 0.4
ABCA4P78363 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.58■□□□□ 0.4
ABCA4P78363 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.58■□□□□ 0.4
ABCA4P78363 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 MIR4785-201ENST00000585005 73 ntBASIC17.58■□□□□ 0.4
ABCA4P78363 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.58■□□□□ 0.4
ABCA4P78363 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC17.58■□□□□ 0.4
ABCA4P78363 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
ABCA4P78363 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.58■□□□□ 0.4
ABCA4P78363 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC17.58■□□□□ 0.4
ABCA4P78363 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.58■□□□□ 0.4
ABCA4P78363 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.58■□□□□ 0.4
ABCA4P78363 RPS2P55-201ENST00000397318 883 ntBASIC17.58■□□□□ 0.4
ABCA4P78363 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.58■□□□□ 0.4
ABCA4P78363 AC107956.1-201ENST00000494359 873 ntBASIC17.58■□□□□ 0.4
ABCA4P78363 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
ABCA4P78363 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
ABCA4P78363 AL356652.1-201ENST00000615962 565 ntBASIC17.58■□□□□ 0.4
ABCA4P78363 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
ABCA4P78363 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ABCA4P78363 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
ABCA4P78363 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
ABCA4P78363 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms