RNA–Protein interactions for RNA: ENST00000563369.6

TK2-213, Transcript of thymidine kinase 2, mitochondrial, humanhuman

TSL 5 BASIC

Gene TK2, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TK2-213ENST00000563369 NISCHQ9Y2I1 1504 aa47.99■■■■■ 5.27
TK2-213ENST00000563369 ABCC9O60706 1549 aa43.62■■■■■ 4.57
TK2-213ENST00000563369 CCDC180Q9P1Z9 1646 aa43.21■■■■■ 4.51
TK2-213ENST00000563369 RB1CC1Q8TDY2 1594 aa41.36■■■■■ 4.21
TK2-213ENST00000563369 DNAJC5BQ9UF47 199 aa41.33■■■■■ 4.21
TK2-213ENST00000563369 NACADO15069 1562 aa41■■■■■ 4.15
TK2-213ENST00000563369 DCAF8L2P0C7V8 631 aa40.65■■■■■ 4.1
TK2-213ENST00000563369 PABPN1Q86U42 306 aaKnown RBP eCLIP40.56■■■■■ 4.08
TK2-213ENST00000563369 MYO15BQ96JP2 1530 aa40.36■■■■■ 4.05
TK2-213ENST00000563369 UNC13AQ9UPW8 1703 aa40.31■■■■■ 4.04
TK2-213ENST00000563369 BICRAQ9NZM4 1560 aa40.16■■■■■ 4.02
TK2-213ENST00000563369 ZCCHC6Q5VYS8 1495 aaKnown RBP39.68■■■■□ 3.94
TK2-213ENST00000563369 DCAF1Q9Y4B6 1507 aa39.66■■■■□ 3.94
TK2-213ENST00000563369 SHROOM4Q9ULL8 1493 aa39.66■■■■□ 3.94
TK2-213ENST00000563369 CC2D2AQ9P2K1 1620 aa39.38■■■■□ 3.89
TK2-213ENST00000563369 CECR2Q9BXF3 1484 aa39.37■■■■□ 3.89
TK2-213ENST00000563369 SCRIBQ14160 1630 aa39.31■■■■□ 3.88
TK2-213ENST00000563369 EIF4G1Q04637 1599 aaKnown RBP39.21■■■■□ 3.87
TK2-213ENST00000563369 DNAJC5Q9H3Z4 198 aa38.3■■■■□ 3.72
TK2-213ENST00000563369 NCAPD3P42695 1498 aa37.89■■■■□ 3.66
TK2-213ENST00000563369 CUX2O14529 1486 aa37.83■■■■□ 3.65
TK2-213ENST00000563369 ERCC6Q03468 1493 aa37.7■■■■□ 3.63
TK2-213ENST00000563369 ATAD2BQ9ULI0 1458 aa37.69■■■■□ 3.62
TK2-213ENST00000563369 SMARCA2P51531 1590 aa37.55■■■■□ 3.6
TK2-213ENST00000563369 HMGXB3Q12766 1538 aa37.53■■■■□ 3.6
TK2-213ENST00000563369 SMARCA4P51532 1647 aa37.49■■■■□ 3.59
TK2-213ENST00000563369 NESP48681 1621 aa37.34■■■■□ 3.57
TK2-213ENST00000563369 BAZ1AQ9NRL2 1556 aaPredicted RBP37.28■■■■□ 3.56
TK2-213ENST00000563369 BAZ1BQ9UIG0 1483 aaKnown RBP37.27■■■■□ 3.56
TK2-213ENST00000563369 PEG3Q9GZU2 1588 aa37.18■■■■□ 3.54
TK2-213ENST00000563369 THOC2Q8NI27 1593 aaKnown RBP37.05■■■■□ 3.52
TK2-213ENST00000563369 LAMC3Q9Y6N6 1575 aa37.05■■■■□ 3.52
TK2-213ENST00000563369 MROH2BQ7Z745 1585 aa36.95■■■■□ 3.51
TK2-213ENST00000563369 PDS5BQ9NTI5 1447 aa36.89■■■■□ 3.5
TK2-213ENST00000563369 KIF21AQ7Z4S6 1674 aa36.79■■■■□ 3.48
TK2-213ENST00000563369 CADPSQ9ULU8 1353 aa36.71■■■■□ 3.47
TK2-213ENST00000563369 MRC2Q9UBG0 1479 aa36.57■■■■□ 3.45
TK2-213ENST00000563369 WDR62O43379 1518 aa36.49■■■■□ 3.43
TK2-213ENST00000563369 WIZO95785 1651 aa36.44■■■■□ 3.42
TK2-213ENST00000563369 TRIM41Q8WV44 630 aa36.36■■■■□ 3.41
TK2-213ENST00000563369 CEP164Q9UPV0 1460 aa36.33■■■■□ 3.41
TK2-213ENST00000563369 FANCD2Q9BXW9 1451 aa36.26■■■■□ 3.4
TK2-213ENST00000563369 CFTRP13569 1480 aa36.2■■■■□ 3.39
TK2-213ENST00000563369 RSF1Q96T23 1441 aaPredicted RBP36.07■■■■□ 3.36
TK2-213ENST00000563369 OSCARQ8IYS5 282 aa36.04■■■■□ 3.36
TK2-213ENST00000563369 TOP2AP11388 1531 aaKnown RBP36■■■■□ 3.35
TK2-213ENST00000563369 URB2Q14146 1524 aaKnown RBP35.98■■■■□ 3.35
TK2-213ENST00000563369 PRDM2Q13029 1718 aa35.67■■■■□ 3.3
TK2-213ENST00000563369 IFT140Q96RY7 1462 aa35.64■■■■□ 3.3
TK2-213ENST00000563369 CCDC88BA6NC98 1476 aa35.61■■■■□ 3.29
TK2-213ENST00000563369 ZNF608Q9ULD9 1512 aaPredicted RBP35.59■■■■□ 3.29
TK2-213ENST00000563369 RIMBP3CA6NJZ7 1639 aa35.53■■■■□ 3.28
TK2-213ENST00000563369 RIMBP3BA6NNM3 1639 aa35.53■■■■□ 3.28
TK2-213ENST00000563369 RIMBP3Q9UFD9 1639 aa35.53■■■■□ 3.28
TK2-213ENST00000563369 TOPBP1Q92547 1522 aa35.52■■■■□ 3.28
TK2-213ENST00000563369 ABCC8Q09428 1581 aa35.46■■■■□ 3.27
TK2-213ENST00000563369 ARHGEF11O15085 1522 aa35.42■■■■□ 3.26
TK2-213ENST00000563369 EIF4G3O43432 1585 aaKnown RBP35.34■■■■□ 3.25
TK2-213ENST00000563369 DNMBPQ6XZF7 1577 aa35.34■■■■□ 3.25
TK2-213ENST00000563369 AQRO60306 1485 aaKnown RBP eCLIP35.22■■■■□ 3.232e-9■■■■■ 39.4
TK2-213ENST00000563369 TARBP1Q13395 1621 aaKnown RBP35.21■■■■□ 3.23
TK2-213ENST00000563369 CYB5RLQ6IPT4 315 aa35.19■■■■□ 3.22
TK2-213ENST00000563369 POLA1P09884 1462 aaPredicted RBP35.13■■■■□ 3.21
TK2-213ENST00000563369 CHD1O14646 1710 aa35.12■■■■□ 3.21
TK2-213ENST00000563369 FBLN2P98095 1184 aa35.06■■■■□ 3.2
TK2-213ENST00000563369 ARAP1Q96P48 1450 aa35.04■■■■□ 3.2
TK2-213ENST00000563369 RAD54L2Q9Y4B4 1467 aa34.99■■■■□ 3.19
TK2-213ENST00000563369 SOGA1O94964 1423 aa34.98■■■■□ 3.19
TK2-213ENST00000563369 TDRD9Q8NDG6 1382 aaKnown RBP34.95■■■■□ 3.19
TK2-213ENST00000563369 TRHP20396 242 aaPredicted RBP34.91■■■■□ 3.18
TK2-213ENST00000563369 WDR97A6NE52 1622 aa34.88■■■■□ 3.17
TK2-213ENST00000563369 SNAPC4Q5SXM2 1469 aa34.85■■■■□ 3.17
TK2-213ENST00000563369 FGD5Q6ZNL6 1462 aa34.84■■■■□ 3.17
TK2-213ENST00000563369 CLASP1Q7Z460 1538 aa34.79■■■■□ 3.16
TK2-213ENST00000563369 MAGI1Q96QZ7 1491 aaPredicted RBP34.78■■■■□ 3.16
TK2-213ENST00000563369 CHMP7Q8WUX9 453 aaPredicted RBP34.77■■■■□ 3.16
TK2-213ENST00000563369 CUX1P39880 1505 aa34.75■■■■□ 3.15
TK2-213ENST00000563369 GRIN2BQ13224 1484 aa34.72■■■■□ 3.15
TK2-213ENST00000563369 SYNJ1O43426 1573 aa34.72■■■■□ 3.15
TK2-213ENST00000563369 SYNJ2O15056 1496 aa34.66■■■■□ 3.14
TK2-213ENST00000563369 GAPVD1Q14C86 1478 aa34.54■■■■□ 3.12
TK2-213ENST00000563369 PBRM1Q86U86 1689 aa34.46■■■■□ 3.11
TK2-213ENST00000563369 ABCA10Q8WWZ4 1543 aa34.45■■■■□ 3.11
TK2-213ENST00000563369 ABCA5Q8WWZ7 1642 aa34.4■■■■□ 3.1
TK2-213ENST00000563369 GRIN2AQ12879 1464 aa34.27■■■■□ 3.08
TK2-213ENST00000563369 WRNQ14191 1432 aaPredicted RBP eCLIP34.24■■■■□ 3.07
TK2-213ENST00000563369 AEBP2Q6ZN18 517 aaPredicted RBP34.21■■■■□ 3.07
TK2-213ENST00000563369 NUP160Q12769 1436 aa34.2■■■■□ 3.06
TK2-213ENST00000563369 ERCC6L2Q5T890 1561 aa34.18■■■■□ 3.06
TK2-213ENST00000563369 ADAMTS12P58397 1594 aa34.17■■■■□ 3.06
TK2-213ENST00000563369 SUPT5HO00267 1087 aaKnown RBP34.14■■■■□ 3.06
TK2-213ENST00000563369 CEP170Q5SW79 1584 aa34.13■■■■□ 3.05
TK2-213ENST00000563369 FHAD1B1AJZ9 1412 aa34.11■■■■□ 3.05
TK2-213ENST00000563369 TOP2BQ02880 1626 aa34.07■■■■□ 3.04
TK2-213ENST00000563369 BIVM-ERCC5R4GMW8 1640 aa34.05■■■■□ 3.04
TK2-213ENST00000563369 SHROOM2Q13796 1616 aa34.04■■■■□ 3.04
TK2-213ENST00000563369 ERICH3Q5RHP9 1530 aa34.01■■■■□ 3.04
TK2-213ENST00000563369 PRG4Q92954 1404 aaPredicted RBP33.87■■■■□ 3.01
TK2-213ENST00000563369 JPH4Q96JJ6 628 aa33.85■■■■□ 3.01
TK2-213ENST00000563369 KIF13AQ9H1H9 1805 aa33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms