RNA–Protein interactions for RNA: ENST00000401030.4

SELENOF-203, Transcript of selenoprotein F, humanhuman

TSL 2 BASIC

Gene SELENOF, Length 727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SELENOF-203ENST00000401030 NISCHQ9Y2I1 1504 aa47.87■■■■■ 5.25
SELENOF-203ENST00000401030 ABCC9O60706 1549 aa43.7■■■■■ 4.59
SELENOF-203ENST00000401030 CCDC180Q9P1Z9 1646 aa43.15■■■■■ 4.5
SELENOF-203ENST00000401030 DNAJC5BQ9UF47 199 aa41.51■■■■■ 4.24
SELENOF-203ENST00000401030 RB1CC1Q8TDY2 1594 aa41.31■■■■■ 4.2
SELENOF-203ENST00000401030 NACADO15069 1562 aa40.91■■■■■ 4.14
SELENOF-203ENST00000401030 DCAF8L2P0C7V8 631 aa40.62■■■■■ 4.09
SELENOF-203ENST00000401030 PABPN1Q86U42 306 aaKnown RBP eCLIP40.62■■■■■ 4.09
SELENOF-203ENST00000401030 UNC13AQ9UPW8 1703 aa40.47■■■■■ 4.07
SELENOF-203ENST00000401030 BICRAQ9NZM4 1560 aa40.22■■■■■ 4.03
SELENOF-203ENST00000401030 MYO15BQ96JP2 1530 aa40.16■■■■■ 4.02
SELENOF-203ENST00000401030 ZCCHC6Q5VYS8 1495 aaKnown RBP39.56■■■■□ 3.92
SELENOF-203ENST00000401030 SHROOM4Q9ULL8 1493 aa39.49■■■■□ 3.91
SELENOF-203ENST00000401030 DCAF1Q9Y4B6 1507 aa39.48■■■■□ 3.91
SELENOF-203ENST00000401030 CC2D2AQ9P2K1 1620 aa39.44■■■■□ 3.9
SELENOF-203ENST00000401030 CECR2Q9BXF3 1484 aa39.39■■■■□ 3.9
SELENOF-203ENST00000401030 SCRIBQ14160 1630 aa39.34■■■■□ 3.89
SELENOF-203ENST00000401030 EIF4G1Q04637 1599 aaKnown RBP39.22■■■■□ 3.87
SELENOF-203ENST00000401030 DNAJC5Q9H3Z4 198 aa38.41■■■■□ 3.74
SELENOF-203ENST00000401030 CUX2O14529 1486 aa37.81■■■■□ 3.64
SELENOF-203ENST00000401030 NCAPD3P42695 1498 aa37.79■■■■□ 3.64
SELENOF-203ENST00000401030 ERCC6Q03468 1493 aa37.71■■■■□ 3.63
SELENOF-203ENST00000401030 ATAD2BQ9ULI0 1458 aa37.62■■■■□ 3.61
SELENOF-203ENST00000401030 SMARCA4P51532 1647 aa37.46■■■■□ 3.59
SELENOF-203ENST00000401030 SMARCA2P51531 1590 aa37.45■■■■□ 3.59
SELENOF-203ENST00000401030 HMGXB3Q12766 1538 aa37.45■■■■□ 3.59
SELENOF-203ENST00000401030 NESP48681 1621 aa37.43■■■■□ 3.58
SELENOF-203ENST00000401030 BAZ1BQ9UIG0 1483 aaKnown RBP37.21■■■■□ 3.55
SELENOF-203ENST00000401030 BAZ1AQ9NRL2 1556 aaPredicted RBP37.17■■■■□ 3.54
SELENOF-203ENST00000401030 THOC2Q8NI27 1593 aaKnown RBP37.12■■■■□ 3.53
SELENOF-203ENST00000401030 PEG3Q9GZU2 1588 aa37.08■■■■□ 3.53
SELENOF-203ENST00000401030 LAMC3Q9Y6N6 1575 aa37■■■■□ 3.51
SELENOF-203ENST00000401030 MROH2BQ7Z745 1585 aa36.92■■■■□ 3.5
SELENOF-203ENST00000401030 KIF21AQ7Z4S6 1674 aa36.91■■■■□ 3.5
SELENOF-203ENST00000401030 PDS5BQ9NTI5 1447 aa36.79■■■■□ 3.48
SELENOF-203ENST00000401030 CADPSQ9ULU8 1353 aa36.61■■■■□ 3.45
SELENOF-203ENST00000401030 MRC2Q9UBG0 1479 aa36.53■■■■□ 3.44
SELENOF-203ENST00000401030 TRIM41Q8WV44 630 aa36.52■■■■□ 3.44
SELENOF-203ENST00000401030 WDR62O43379 1518 aa36.47■■■■□ 3.43
SELENOF-203ENST00000401030 WIZO95785 1651 aa36.46■■■■□ 3.43
SELENOF-203ENST00000401030 CEP164Q9UPV0 1460 aa36.28■■■■□ 3.4
SELENOF-203ENST00000401030 FANCD2Q9BXW9 1451 aa36.22■■■■□ 3.39
SELENOF-203ENST00000401030 CFTRP13569 1480 aa36.1■■■■□ 3.37
SELENOF-203ENST00000401030 OSCARQ8IYS5 282 aa36.01■■■■□ 3.36
SELENOF-203ENST00000401030 URB2Q14146 1524 aaKnown RBP35.98■■■■□ 3.35
SELENOF-203ENST00000401030 RSF1Q96T23 1441 aaPredicted RBP35.95■■■■□ 3.35
SELENOF-203ENST00000401030 TOP2AP11388 1531 aaKnown RBP35.91■■■■□ 3.34
SELENOF-203ENST00000401030 PRDM2Q13029 1718 aa35.7■■■■□ 3.31
SELENOF-203ENST00000401030 RIMBP3CA6NJZ7 1639 aa35.65■■■■□ 3.3
SELENOF-203ENST00000401030 RIMBP3BA6NNM3 1639 aa35.65■■■■□ 3.3
SELENOF-203ENST00000401030 RIMBP3Q9UFD9 1639 aa35.65■■■■□ 3.3
SELENOF-203ENST00000401030 ZNF608Q9ULD9 1512 aaPredicted RBP35.63■■■■□ 3.29
SELENOF-203ENST00000401030 IFT140Q96RY7 1462 aa35.57■■■■□ 3.28
SELENOF-203ENST00000401030 CCDC88BA6NC98 1476 aa35.54■■■■□ 3.28
SELENOF-203ENST00000401030 TOPBP1Q92547 1522 aa35.48■■■■□ 3.27
SELENOF-203ENST00000401030 ARHGEF11O15085 1522 aa35.46■■■■□ 3.27
SELENOF-203ENST00000401030 EIF4G3O43432 1585 aaKnown RBP35.38■■■■□ 3.25
SELENOF-203ENST00000401030 ABCC8Q09428 1581 aa35.3■■■■□ 3.24
SELENOF-203ENST00000401030 DNMBPQ6XZF7 1577 aa35.29■■■■□ 3.24
SELENOF-203ENST00000401030 CHD1O14646 1710 aa35.23■■■■□ 3.23
SELENOF-203ENST00000401030 AQRO60306 1485 aaKnown RBP eCLIP35.23■■■■□ 3.23
SELENOF-203ENST00000401030 CYB5RLQ6IPT4 315 aa35.23■■■■□ 3.23
SELENOF-203ENST00000401030 TARBP1Q13395 1621 aaKnown RBP35.23■■■■□ 3.23
SELENOF-203ENST00000401030 ARAP1Q96P48 1450 aa35.1■■■■□ 3.21
SELENOF-203ENST00000401030 POLA1P09884 1462 aaPredicted RBP35.09■■■■□ 3.21
SELENOF-203ENST00000401030 FBLN2P98095 1184 aa35.07■■■■□ 3.2
SELENOF-203ENST00000401030 RAD54L2Q9Y4B4 1467 aa35■■■■□ 3.19
SELENOF-203ENST00000401030 TRHP20396 242 aaPredicted RBP34.98■■■■□ 3.19
SELENOF-203ENST00000401030 TDRD9Q8NDG6 1382 aaKnown RBP34.93■■■■□ 3.18
SELENOF-203ENST00000401030 SOGA1O94964 1423 aa34.9■■■■□ 3.18
SELENOF-203ENST00000401030 SNAPC4Q5SXM2 1469 aa34.84■■■■□ 3.17
SELENOF-203ENST00000401030 CLASP1Q7Z460 1538 aa34.81■■■■□ 3.16
SELENOF-203ENST00000401030 FGD5Q6ZNL6 1462 aa34.8■■■■□ 3.16
SELENOF-203ENST00000401030 WDR97A6NE52 1622 aa34.74■■■■□ 3.15
SELENOF-203ENST00000401030 CUX1P39880 1505 aa34.71■■■■□ 3.15
SELENOF-203ENST00000401030 CHMP7Q8WUX9 453 aaPredicted RBP34.71■■■■□ 3.15
SELENOF-203ENST00000401030 MAGI1Q96QZ7 1491 aaPredicted RBP34.69■■■■□ 3.14
SELENOF-203ENST00000401030 SYNJ1O43426 1573 aa34.68■■■■□ 3.14
SELENOF-203ENST00000401030 GRIN2BQ13224 1484 aa34.65■■■■□ 3.14
SELENOF-203ENST00000401030 SYNJ2O15056 1496 aa34.59■■■■□ 3.13
SELENOF-203ENST00000401030 PBRM1Q86U86 1689 aa34.5■■■■□ 3.11
SELENOF-203ENST00000401030 GAPVD1Q14C86 1478 aa34.46■■■■□ 3.11
SELENOF-203ENST00000401030 ABCA5Q8WWZ7 1642 aa34.37■■■■□ 3.09
SELENOF-203ENST00000401030 ABCA10Q8WWZ4 1543 aa34.35■■■■□ 3.09
SELENOF-203ENST00000401030 AEBP2Q6ZN18 517 aaPredicted RBP34.29■■■■□ 3.08
SELENOF-203ENST00000401030 ERCC6L2Q5T890 1561 aa34.28■■■■□ 3.08
SELENOF-203ENST00000401030 GRIN2AQ12879 1464 aa34.21■■■■□ 3.07
SELENOF-203ENST00000401030 CEP170Q5SW79 1584 aa34.15■■■■□ 3.06
SELENOF-203ENST00000401030 ADAMTS12P58397 1594 aa34.15■■■■□ 3.06
SELENOF-203ENST00000401030 NUP160Q12769 1436 aa34.13■■■■□ 3.05
SELENOF-203ENST00000401030 WRNQ14191 1432 aaPredicted RBP eCLIP34.11■■■■□ 3.05
SELENOF-203ENST00000401030 SHROOM2Q13796 1616 aa34.04■■■■□ 3.04
SELENOF-203ENST00000401030 FHAD1B1AJZ9 1412 aa34■■■■□ 3.03
SELENOF-203ENST00000401030 BIVM-ERCC5R4GMW8 1640 aa34■■■■□ 3.03
SELENOF-203ENST00000401030 TOP2BQ02880 1626 aa33.98■■■■□ 3.03
SELENOF-203ENST00000401030 SUPT5HO00267 1087 aaKnown RBP33.98■■■■□ 3.03
SELENOF-203ENST00000401030 ERICH3Q5RHP9 1530 aa33.9■■■■□ 3.02
SELENOF-203ENST00000401030 KIF13AQ9H1H9 1805 aa33.89■■■■□ 3.02
SELENOF-203ENST00000401030 PRG4Q92954 1404 aaPredicted RBP33.84■■■■□ 3.01
SELENOF-203ENST00000401030 JPH4Q96JJ6 628 aa33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms