RNA–Protein interactions for RNA: ENST00000397318.4

RPS2P55-201, Transcript of ribosomal protein S2 pseudogene 55, humanhuman

BASIC

Gene RPS2P55, Length 883 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS2P55-201ENST00000397318 NISCHQ9Y2I1 1504 aa48.59■■■■■ 5.37
RPS2P55-201ENST00000397318 CCDC180Q9P1Z9 1646 aa43.46■■■■■ 4.55
RPS2P55-201ENST00000397318 ABCC9O60706 1549 aa43.11■■■■■ 4.49
RPS2P55-201ENST00000397318 RB1CC1Q8TDY2 1594 aa41.2■■■■■ 4.19
RPS2P55-201ENST00000397318 NACADO15069 1562 aa41.02■■■■■ 4.16
RPS2P55-201ENST00000397318 DCAF8L2P0C7V8 631 aa40.86■■■■■ 4.13
RPS2P55-201ENST00000397318 MYO15BQ96JP2 1530 aa40.59■■■■■ 4.09
RPS2P55-201ENST00000397318 ZCCHC6Q5VYS8 1495 aaKnown RBP40.33■■■■■ 4.05
RPS2P55-201ENST00000397318 UNC13AQ9UPW8 1703 aa40.28■■■■■ 4.04
RPS2P55-201ENST00000397318 PABPN1Q86U42 306 aaKnown RBP eCLIP40.2■■■■■ 4.03
RPS2P55-201ENST00000397318 DCAF1Q9Y4B6 1507 aa40.18■■■■■ 4.02
RPS2P55-201ENST00000397318 DNAJC5BQ9UF47 199 aa40.18■■■■■ 4.02
RPS2P55-201ENST00000397318 BICRAQ9NZM4 1560 aa40■■■■□ 3.99
RPS2P55-201ENST00000397318 SCRIBQ14160 1630 aa39.58■■■■□ 3.93
RPS2P55-201ENST00000397318 SHROOM4Q9ULL8 1493 aa39.51■■■■□ 3.92
RPS2P55-201ENST00000397318 CC2D2AQ9P2K1 1620 aa38.98■■■■□ 3.83
RPS2P55-201ENST00000397318 EIF4G1Q04637 1599 aaKnown RBP38.98■■■■□ 3.83
RPS2P55-201ENST00000397318 CECR2Q9BXF3 1484 aa38.81■■■■□ 3.8
RPS2P55-201ENST00000397318 NCAPD3P42695 1498 aa37.88■■■■□ 3.65
RPS2P55-201ENST00000397318 SMARCA4P51532 1647 aa37.83■■■■□ 3.65
RPS2P55-201ENST00000397318 ATAD2BQ9ULI0 1458 aa37.78■■■■□ 3.64
RPS2P55-201ENST00000397318 SMARCA2P51531 1590 aa37.71■■■■□ 3.63
RPS2P55-201ENST00000397318 BAZ1AQ9NRL2 1556 aaPredicted RBP37.7■■■■□ 3.63
RPS2P55-201ENST00000397318 HMGXB3Q12766 1538 aa37.6■■■■□ 3.61
RPS2P55-201ENST00000397318 PEG3Q9GZU2 1588 aa37.48■■■■□ 3.59
RPS2P55-201ENST00000397318 MROH2BQ7Z745 1585 aa37.43■■■■□ 3.58
RPS2P55-201ENST00000397318 BAZ1BQ9UIG0 1483 aaKnown RBP37.43■■■■□ 3.58
RPS2P55-201ENST00000397318 ERCC6Q03468 1493 aa37.2■■■■□ 3.54
RPS2P55-201ENST00000397318 NESP48681 1621 aa37.13■■■■□ 3.53
RPS2P55-201ENST00000397318 CUX2O14529 1486 aa37.05■■■■□ 3.52
RPS2P55-201ENST00000397318 WIZO95785 1651 aa37■■■■□ 3.51
RPS2P55-201ENST00000397318 LAMC3Q9Y6N6 1575 aa36.95■■■■□ 3.51
RPS2P55-201ENST00000397318 RSF1Q96T23 1441 aaPredicted RBP36.79■■■■□ 3.48
RPS2P55-201ENST00000397318 PDS5BQ9NTI5 1447 aa36.74■■■■□ 3.47
RPS2P55-201ENST00000397318 CADPSQ9ULU8 1353 aa36.73■■■■□ 3.47
RPS2P55-201ENST00000397318 THOC2Q8NI27 1593 aaKnown RBP36.69■■■■□ 3.46
RPS2P55-201ENST00000397318 DNAJC5Q9H3Z4 198 aa36.67■■■■□ 3.46
RPS2P55-201ENST00000397318 KIF21AQ7Z4S6 1674 aa36.67■■■■□ 3.46
RPS2P55-201ENST00000397318 TOP2AP11388 1531 aaKnown RBP36.56■■■■□ 3.44
RPS2P55-201ENST00000397318 CFTRP13569 1480 aa36.38■■■■□ 3.41
RPS2P55-201ENST00000397318 MRC2Q9UBG0 1479 aa36.37■■■■□ 3.41
RPS2P55-201ENST00000397318 FANCD2Q9BXW9 1451 aa36.3■■■■□ 3.4
RPS2P55-201ENST00000397318 CEP164Q9UPV0 1460 aa36.3■■■■□ 3.4
RPS2P55-201ENST00000397318 WDR62O43379 1518 aa36.29■■■■□ 3.4
RPS2P55-201ENST00000397318 CCDC88BA6NC98 1476 aa36.16■■■■□ 3.38
RPS2P55-201ENST00000397318 PRDM2Q13029 1718 aa36.03■■■■□ 3.36
RPS2P55-201ENST00000397318 URB2Q14146 1524 aaKnown RBP35.98■■■■□ 3.35
RPS2P55-201ENST00000397318 TOPBP1Q92547 1522 aa35.65■■■■□ 3.3
RPS2P55-201ENST00000397318 ABCC8Q09428 1581 aa35.63■■■■□ 3.29
RPS2P55-201ENST00000397318 IFT140Q96RY7 1462 aa35.57■■■■□ 3.28
RPS2P55-201ENST00000397318 DNMBPQ6XZF7 1577 aa35.55■■■■□ 3.28
RPS2P55-201ENST00000397318 ZNF608Q9ULD9 1512 aaPredicted RBP35.47■■■■□ 3.27
RPS2P55-201ENST00000397318 OSCARQ8IYS5 282 aa35.43■■■■□ 3.26
RPS2P55-201ENST00000397318 SUPT5HO00267 1087 aaKnown RBP35.39■■■■□ 3.26
RPS2P55-201ENST00000397318 TARBP1Q13395 1621 aaKnown RBP35.32■■■■□ 3.24
RPS2P55-201ENST00000397318 POLA1P09884 1462 aaPredicted RBP35.3■■■■□ 3.24
RPS2P55-201ENST00000397318 EIF4G3O43432 1585 aaKnown RBP35.28■■■■□ 3.24
RPS2P55-201ENST00000397318 AQRO60306 1485 aaKnown RBP eCLIP35.21■■■■□ 3.23
RPS2P55-201ENST00000397318 SOGA1O94964 1423 aa35.17■■■■□ 3.22
RPS2P55-201ENST00000397318 RAD54L2Q9Y4B4 1467 aa35.16■■■■□ 3.22
RPS2P55-201ENST00000397318 TRIM41Q8WV44 630 aa35.15■■■■□ 3.22
RPS2P55-201ENST00000397318 CUX1P39880 1505 aa35.15■■■■□ 3.22
RPS2P55-201ENST00000397318 FGD5Q6ZNL6 1462 aa35.12■■■■□ 3.21
RPS2P55-201ENST00000397318 TDRD9Q8NDG6 1382 aaKnown RBP35.04■■■■□ 3.2
RPS2P55-201ENST00000397318 WDR97A6NE52 1622 aa34.99■■■■□ 3.19
RPS2P55-201ENST00000397318 CHD1O14646 1710 aa34.96■■■■□ 3.19
RPS2P55-201ENST00000397318 FBLN2P98095 1184 aa34.9■■■■□ 3.18
RPS2P55-201ENST00000397318 RIMBP3CA6NJZ7 1639 aa34.9■■■■□ 3.18
RPS2P55-201ENST00000397318 RIMBP3BA6NNM3 1639 aa34.9■■■■□ 3.18
RPS2P55-201ENST00000397318 RIMBP3Q9UFD9 1639 aa34.9■■■■□ 3.18
RPS2P55-201ENST00000397318 SNAPC4Q5SXM2 1469 aa34.84■■■■□ 3.17
RPS2P55-201ENST00000397318 ARHGEF11O15085 1522 aa34.82■■■■□ 3.16
RPS2P55-201ENST00000397318 GRIN2BQ13224 1484 aa34.81■■■■□ 3.16
RPS2P55-201ENST00000397318 MAGI1Q96QZ7 1491 aaPredicted RBP34.78■■■■□ 3.16
RPS2P55-201ENST00000397318 ABCA10Q8WWZ4 1543 aa34.76■■■■□ 3.16
RPS2P55-201ENST00000397318 GAPVD1Q14C86 1478 aa34.73■■■■□ 3.15
RPS2P55-201ENST00000397318 CHMP7Q8WUX9 453 aaPredicted RBP34.72■■■■□ 3.15
RPS2P55-201ENST00000397318 WRNQ14191 1432 aaPredicted RBP eCLIP34.7■■■■□ 3.15
RPS2P55-201ENST00000397318 TOP2BQ02880 1626 aa34.69■■■■□ 3.14
RPS2P55-201ENST00000397318 PBRM1Q86U86 1689 aa34.68■■■■□ 3.14
RPS2P55-201ENST00000397318 BIVM-ERCC5R4GMW8 1640 aa34.68■■■■□ 3.14
RPS2P55-201ENST00000397318 ABCA5Q8WWZ7 1642 aa34.67■■■■□ 3.14
RPS2P55-201ENST00000397318 SYNJ2O15056 1496 aa34.66■■■■□ 3.14
RPS2P55-201ENST00000397318 SYNJ1O43426 1573 aa34.63■■■■□ 3.13
RPS2P55-201ENST00000397318 CLASP1Q7Z460 1538 aa34.59■■■■□ 3.13
RPS2P55-201ENST00000397318 CYB5RLQ6IPT4 315 aa34.56■■■■□ 3.12
RPS2P55-201ENST00000397318 ARAP1Q96P48 1450 aa34.5■■■■□ 3.11
RPS2P55-201ENST00000397318 ADAMTS12P58397 1594 aa34.37■■■■□ 3.09
RPS2P55-201ENST00000397318 GRIN2AQ12879 1464 aa34.36■■■■□ 3.09
RPS2P55-201ENST00000397318 ERICH3Q5RHP9 1530 aa34.34■■■■□ 3.09
RPS2P55-201ENST00000397318 FHAD1B1AJZ9 1412 aa34.31■■■■□ 3.08
RPS2P55-201ENST00000397318 NUP160Q12769 1436 aa34.24■■■■□ 3.07
RPS2P55-201ENST00000397318 CEP170Q5SW79 1584 aa34.22■■■■□ 3.07
RPS2P55-201ENST00000397318 SHROOM2Q13796 1616 aa34.06■■■■□ 3.04
RPS2P55-201ENST00000397318 TRHP20396 242 aaPredicted RBP34.06■■■■□ 3.04
RPS2P55-201ENST00000397318 ERCC6L2Q5T890 1561 aa34.06■■■■□ 3.04
RPS2P55-201ENST00000397318 KIF27Q86VH2 1401 aa34.03■■■■□ 3.04
RPS2P55-201ENST00000397318 IGF1RP08069 1367 aa33.98■■■■□ 3.03
RPS2P55-201ENST00000397318 JPH4Q96JJ6 628 aa33.91■■■■□ 3.02
RPS2P55-201ENST00000397318 CUL7Q14999 1698 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms