RNA–Protein interactions for RNA: ENST00000397318.4

RPS2P55-201, Transcript of ribosomal protein S2 pseudogene 55, humanhuman

BASIC

Gene RPS2P55, Length 883 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS2P55-201ENST00000397318 NISCHQ9Y2I1 1504 aa48.59■■■■■ 5.37
RPS2P55-201ENST00000397318 CCDC180Q9P1Z9 1646 aa43.46■■■■■ 4.55
RPS2P55-201ENST00000397318 ABCC9O60706 1549 aa43.11■■■■■ 4.49
RPS2P55-201ENST00000397318 RB1CC1Q8TDY2 1594 aa41.2■■■■■ 4.19
RPS2P55-201ENST00000397318 NACADO15069 1562 aa41.02■■■■■ 4.16
RPS2P55-201ENST00000397318 DCAF8L2P0C7V8 631 aa40.86■■■■■ 4.13
RPS2P55-201ENST00000397318 MYO15BQ96JP2 1530 aa40.59■■■■■ 4.09
RPS2P55-201ENST00000397318 ZCCHC6Q5VYS8 1495 aaKnown RBP40.33■■■■■ 4.05
RPS2P55-201ENST00000397318 UNC13AQ9UPW8 1703 aa40.28■■■■■ 4.04
RPS2P55-201ENST00000397318 PABPN1Q86U42 306 aaKnown RBP eCLIP40.2■■■■■ 4.03
RPS2P55-201ENST00000397318 DCAF1Q9Y4B6 1507 aa40.18■■■■■ 4.02
RPS2P55-201ENST00000397318 DNAJC5BQ9UF47 199 aa40.18■■■■■ 4.02
RPS2P55-201ENST00000397318 BICRAQ9NZM4 1560 aa40■■■■□ 3.99
RPS2P55-201ENST00000397318 SCRIBQ14160 1630 aa39.58■■■■□ 3.93
RPS2P55-201ENST00000397318 SHROOM4Q9ULL8 1493 aa39.51■■■■□ 3.92
RPS2P55-201ENST00000397318 CC2D2AQ9P2K1 1620 aa38.98■■■■□ 3.83
RPS2P55-201ENST00000397318 EIF4G1Q04637 1599 aaKnown RBP38.98■■■■□ 3.83
RPS2P55-201ENST00000397318 CECR2Q9BXF3 1484 aa38.81■■■■□ 3.8
RPS2P55-201ENST00000397318 NCAPD3P42695 1498 aa37.88■■■■□ 3.65
RPS2P55-201ENST00000397318 SMARCA4P51532 1647 aa37.83■■■■□ 3.65
RPS2P55-201ENST00000397318 ATAD2BQ9ULI0 1458 aa37.78■■■■□ 3.64
RPS2P55-201ENST00000397318 SMARCA2P51531 1590 aa37.71■■■■□ 3.63
RPS2P55-201ENST00000397318 BAZ1AQ9NRL2 1556 aaPredicted RBP37.7■■■■□ 3.63
RPS2P55-201ENST00000397318 HMGXB3Q12766 1538 aa37.6■■■■□ 3.61
RPS2P55-201ENST00000397318 PEG3Q9GZU2 1588 aa37.48■■■■□ 3.59
RPS2P55-201ENST00000397318 MROH2BQ7Z745 1585 aa37.43■■■■□ 3.58
RPS2P55-201ENST00000397318 BAZ1BQ9UIG0 1483 aaKnown RBP37.43■■■■□ 3.58
RPS2P55-201ENST00000397318 ERCC6Q03468 1493 aa37.2■■■■□ 3.54
RPS2P55-201ENST00000397318 NESP48681 1621 aa37.13■■■■□ 3.53
RPS2P55-201ENST00000397318 CUX2O14529 1486 aa37.05■■■■□ 3.52
RPS2P55-201ENST00000397318 WIZO95785 1651 aa37■■■■□ 3.51
RPS2P55-201ENST00000397318 LAMC3Q9Y6N6 1575 aa36.95■■■■□ 3.51
RPS2P55-201ENST00000397318 RSF1Q96T23 1441 aaPredicted RBP36.79■■■■□ 3.48
RPS2P55-201ENST00000397318 PDS5BQ9NTI5 1447 aa36.74■■■■□ 3.47
RPS2P55-201ENST00000397318 CADPSQ9ULU8 1353 aa36.73■■■■□ 3.47
RPS2P55-201ENST00000397318 THOC2Q8NI27 1593 aaKnown RBP36.69■■■■□ 3.46
RPS2P55-201ENST00000397318 DNAJC5Q9H3Z4 198 aa36.67■■■■□ 3.46
RPS2P55-201ENST00000397318 KIF21AQ7Z4S6 1674 aa36.67■■■■□ 3.46
RPS2P55-201ENST00000397318 TOP2AP11388 1531 aaKnown RBP36.56■■■■□ 3.44
RPS2P55-201ENST00000397318 CFTRP13569 1480 aa36.38■■■■□ 3.41
RPS2P55-201ENST00000397318 MRC2Q9UBG0 1479 aa36.37■■■■□ 3.41
RPS2P55-201ENST00000397318 FANCD2Q9BXW9 1451 aa36.3■■■■□ 3.4
RPS2P55-201ENST00000397318 CEP164Q9UPV0 1460 aa36.3■■■■□ 3.4
RPS2P55-201ENST00000397318 WDR62O43379 1518 aa36.29■■■■□ 3.4
RPS2P55-201ENST00000397318 CCDC88BA6NC98 1476 aa36.16■■■■□ 3.38
RPS2P55-201ENST00000397318 PRDM2Q13029 1718 aa36.03■■■■□ 3.36
RPS2P55-201ENST00000397318 URB2Q14146 1524 aaKnown RBP35.98■■■■□ 3.35
RPS2P55-201ENST00000397318 TOPBP1Q92547 1522 aa35.65■■■■□ 3.3
RPS2P55-201ENST00000397318 ABCC8Q09428 1581 aa35.63■■■■□ 3.29
RPS2P55-201ENST00000397318 IFT140Q96RY7 1462 aa35.57■■■■□ 3.28
RPS2P55-201ENST00000397318 DNMBPQ6XZF7 1577 aa35.55■■■■□ 3.28
RPS2P55-201ENST00000397318 ZNF608Q9ULD9 1512 aaPredicted RBP35.47■■■■□ 3.27
RPS2P55-201ENST00000397318 OSCARQ8IYS5 282 aa35.43■■■■□ 3.26
RPS2P55-201ENST00000397318 SUPT5HO00267 1087 aaKnown RBP35.39■■■■□ 3.26
RPS2P55-201ENST00000397318 TARBP1Q13395 1621 aaKnown RBP35.32■■■■□ 3.24
RPS2P55-201ENST00000397318 POLA1P09884 1462 aaPredicted RBP35.3■■■■□ 3.24
RPS2P55-201ENST00000397318 EIF4G3O43432 1585 aaKnown RBP35.28■■■■□ 3.24
RPS2P55-201ENST00000397318 AQRO60306 1485 aaKnown RBP eCLIP35.21■■■■□ 3.23
RPS2P55-201ENST00000397318 SOGA1O94964 1423 aa35.17■■■■□ 3.22
RPS2P55-201ENST00000397318 RAD54L2Q9Y4B4 1467 aa35.16■■■■□ 3.22
RPS2P55-201ENST00000397318 TRIM41Q8WV44 630 aa35.15■■■■□ 3.22
RPS2P55-201ENST00000397318 CUX1P39880 1505 aa35.15■■■■□ 3.22
RPS2P55-201ENST00000397318 FGD5Q6ZNL6 1462 aa35.12■■■■□ 3.21
RPS2P55-201ENST00000397318 TDRD9Q8NDG6 1382 aaKnown RBP35.04■■■■□ 3.2
RPS2P55-201ENST00000397318 WDR97A6NE52 1622 aa34.99■■■■□ 3.19
RPS2P55-201ENST00000397318 CHD1O14646 1710 aa34.96■■■■□ 3.19
RPS2P55-201ENST00000397318 FBLN2P98095 1184 aa34.9■■■■□ 3.18
RPS2P55-201ENST00000397318 RIMBP3CA6NJZ7 1639 aa34.9■■■■□ 3.18
RPS2P55-201ENST00000397318 RIMBP3BA6NNM3 1639 aa34.9■■■■□ 3.18
RPS2P55-201ENST00000397318 RIMBP3Q9UFD9 1639 aa34.9■■■■□ 3.18
RPS2P55-201ENST00000397318 SNAPC4Q5SXM2 1469 aa34.84■■■■□ 3.17
RPS2P55-201ENST00000397318 ARHGEF11O15085 1522 aa34.82■■■■□ 3.16
RPS2P55-201ENST00000397318 GRIN2BQ13224 1484 aa34.81■■■■□ 3.16
RPS2P55-201ENST00000397318 MAGI1Q96QZ7 1491 aaPredicted RBP34.78■■■■□ 3.16
RPS2P55-201ENST00000397318 ABCA10Q8WWZ4 1543 aa34.76■■■■□ 3.16
RPS2P55-201ENST00000397318 GAPVD1Q14C86 1478 aa34.73■■■■□ 3.15
RPS2P55-201ENST00000397318 CHMP7Q8WUX9 453 aaPredicted RBP34.72■■■■□ 3.15
RPS2P55-201ENST00000397318 WRNQ14191 1432 aaPredicted RBP eCLIP34.7■■■■□ 3.15
RPS2P55-201ENST00000397318 TOP2BQ02880 1626 aa34.69■■■■□ 3.14
RPS2P55-201ENST00000397318 PBRM1Q86U86 1689 aa34.68■■■■□ 3.14
RPS2P55-201ENST00000397318 BIVM-ERCC5R4GMW8 1640 aa34.68■■■■□ 3.14
RPS2P55-201ENST00000397318 ABCA5Q8WWZ7 1642 aa34.67■■■■□ 3.14
RPS2P55-201ENST00000397318 SYNJ2O15056 1496 aa34.66■■■■□ 3.14
RPS2P55-201ENST00000397318 SYNJ1O43426 1573 aa34.63■■■■□ 3.13
RPS2P55-201ENST00000397318 CLASP1Q7Z460 1538 aa34.59■■■■□ 3.13
RPS2P55-201ENST00000397318 CYB5RLQ6IPT4 315 aa34.56■■■■□ 3.12
RPS2P55-201ENST00000397318 ARAP1Q96P48 1450 aa34.5■■■■□ 3.11
RPS2P55-201ENST00000397318 ADAMTS12P58397 1594 aa34.37■■■■□ 3.09
RPS2P55-201ENST00000397318 GRIN2AQ12879 1464 aa34.36■■■■□ 3.09
RPS2P55-201ENST00000397318 ERICH3Q5RHP9 1530 aa34.34■■■■□ 3.09
RPS2P55-201ENST00000397318 FHAD1B1AJZ9 1412 aa34.31■■■■□ 3.08
RPS2P55-201ENST00000397318 NUP160Q12769 1436 aa34.24■■■■□ 3.07
RPS2P55-201ENST00000397318 CEP170Q5SW79 1584 aa34.22■■■■□ 3.07
RPS2P55-201ENST00000397318 SHROOM2Q13796 1616 aa34.06■■■■□ 3.04
RPS2P55-201ENST00000397318 TRHP20396 242 aaPredicted RBP34.06■■■■□ 3.04
RPS2P55-201ENST00000397318 ERCC6L2Q5T890 1561 aa34.06■■■■□ 3.04
RPS2P55-201ENST00000397318 KIF27Q86VH2 1401 aa34.03■■■■□ 3.04
RPS2P55-201ENST00000397318 IGF1RP08069 1367 aa33.98■■■■□ 3.03
RPS2P55-201ENST00000397318 JPH4Q96JJ6 628 aa33.91■■■■□ 3.02
RPS2P55-201ENST00000397318 CUL7Q14999 1698 aa33.9■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms