RNA–Protein interactions for RNA: ENST00000368779.1

LCE2A-201, Transcript of late cornified envelope 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCE2A, Length 592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCE2A-201ENST00000368779 NISCHQ9Y2I1 1504 aa48.17■■■■■ 5.3
LCE2A-201ENST00000368779 CCDC180Q9P1Z9 1646 aa42.68■■■■■ 4.42
LCE2A-201ENST00000368779 ABCC9O60706 1549 aa41.78■■■■■ 4.28
LCE2A-201ENST00000368779 DCAF8L2P0C7V8 631 aa40.46■■■■■ 4.07
LCE2A-201ENST00000368779 RB1CC1Q8TDY2 1594 aa40.19■■■■■ 4.02
LCE2A-201ENST00000368779 NACADO15069 1562 aa40.18■■■■■ 4.02
LCE2A-201ENST00000368779 ZCCHC6Q5VYS8 1495 aaKnown RBP40.13■■■■■ 4.01
LCE2A-201ENST00000368779 MYO15BQ96JP2 1530 aa39.94■■■■□ 3.98
LCE2A-201ENST00000368779 DCAF1Q9Y4B6 1507 aa39.82■■■■□ 3.97
LCE2A-201ENST00000368779 UNC13AQ9UPW8 1703 aa39.17■■■■□ 3.86
LCE2A-201ENST00000368779 PABPN1Q86U42 306 aaKnown RBP eCLIP39.15■■■■□ 3.86
LCE2A-201ENST00000368779 SCRIBQ14160 1630 aa39.04■■■■□ 3.84
LCE2A-201ENST00000368779 BICRAQ9NZM4 1560 aa38.9■■■■□ 3.82
LCE2A-201ENST00000368779 SHROOM4Q9ULL8 1493 aa38.52■■■■□ 3.76
LCE2A-201ENST00000368779 DNAJC5BQ9UF47 199 aa38.23■■■■□ 3.71
LCE2A-201ENST00000368779 EIF4G1Q04637 1599 aaKnown RBP37.91■■■■□ 3.66
LCE2A-201ENST00000368779 CC2D2AQ9P2K1 1620 aa37.73■■■■□ 3.63
LCE2A-201ENST00000368779 CECR2Q9BXF3 1484 aa37.53■■■■□ 3.6
LCE2A-201ENST00000368779 BAZ1AQ9NRL2 1556 aaPredicted RBP37.34■■■■□ 3.57
LCE2A-201ENST00000368779 SMARCA4P51532 1647 aa37.32■■■■□ 3.57
LCE2A-201ENST00000368779 ATAD2BQ9ULI0 1458 aa37.13■■■■□ 3.54
LCE2A-201ENST00000368779 MROH2BQ7Z745 1585 aa37.13■■■■□ 3.53
LCE2A-201ENST00000368779 SMARCA2P51531 1590 aa37.08■■■■□ 3.53
LCE2A-201ENST00000368779 NCAPD3P42695 1498 aa37.08■■■■□ 3.53
LCE2A-201ENST00000368779 PEG3Q9GZU2 1588 aa36.91■■■■□ 3.5
LCE2A-201ENST00000368779 HMGXB3Q12766 1538 aa36.87■■■■□ 3.49
LCE2A-201ENST00000368779 BAZ1BQ9UIG0 1483 aaKnown RBP36.87■■■■□ 3.49
LCE2A-201ENST00000368779 RSF1Q96T23 1441 aaPredicted RBP36.79■■■■□ 3.48
LCE2A-201ENST00000368779 WIZO95785 1651 aa36.72■■■■□ 3.47
LCE2A-201ENST00000368779 TOP2AP11388 1531 aaKnown RBP36.34■■■■□ 3.41
LCE2A-201ENST00000368779 NESP48681 1621 aa36.16■■■■□ 3.38
LCE2A-201ENST00000368779 SUPT5HO00267 1087 aaKnown RBP36.14■■■■□ 3.38
LCE2A-201ENST00000368779 LAMC3Q9Y6N6 1575 aa36.06■■■■□ 3.36
LCE2A-201ENST00000368779 CADPSQ9ULU8 1353 aa36.06■■■■□ 3.36
LCE2A-201ENST00000368779 ERCC6Q03468 1493 aa36.04■■■■□ 3.36
LCE2A-201ENST00000368779 CCDC88BA6NC98 1476 aa35.97■■■■□ 3.35
LCE2A-201ENST00000368779 PDS5BQ9NTI5 1447 aa35.91■■■■□ 3.34
LCE2A-201ENST00000368779 CFTRP13569 1480 aa35.82■■■■□ 3.32
LCE2A-201ENST00000368779 KIF21AQ7Z4S6 1674 aa35.66■■■■□ 3.3
LCE2A-201ENST00000368779 FANCD2Q9BXW9 1451 aa35.63■■■■□ 3.29
LCE2A-201ENST00000368779 CEP164Q9UPV0 1460 aa35.57■■■■□ 3.28
LCE2A-201ENST00000368779 CUX2O14529 1486 aa35.52■■■■□ 3.28
LCE2A-201ENST00000368779 THOC2Q8NI27 1593 aaKnown RBP35.49■■■■□ 3.27
LCE2A-201ENST00000368779 MRC2Q9UBG0 1479 aa35.48■■■■□ 3.27
LCE2A-201ENST00000368779 PRDM2Q13029 1718 aa35.46■■■■□ 3.27
LCE2A-201ENST00000368779 WDR62O43379 1518 aa35.29■■■■□ 3.24
LCE2A-201ENST00000368779 URB2Q14146 1524 aaKnown RBP35.22■■■■□ 3.23
LCE2A-201ENST00000368779 ABCC8Q09428 1581 aa35.1■■■■□ 3.21
LCE2A-201ENST00000368779 TOPBP1Q92547 1522 aa35.06■■■■□ 3.2
LCE2A-201ENST00000368779 DNMBPQ6XZF7 1577 aa35■■■■□ 3.19
LCE2A-201ENST00000368779 CUX1P39880 1505 aa34.82■■■■□ 3.16
LCE2A-201ENST00000368779 IFT140Q96RY7 1462 aa34.82■■■■□ 3.16
LCE2A-201ENST00000368779 POLA1P09884 1462 aaPredicted RBP34.76■■■■□ 3.15
LCE2A-201ENST00000368779 WRNQ14191 1432 aaPredicted RBP eCLIP34.72■■■■□ 3.15
LCE2A-201ENST00000368779 FGD5Q6ZNL6 1462 aa34.71■■■■□ 3.15
LCE2A-201ENST00000368779 SOGA1O94964 1423 aa34.7■■■■□ 3.15
LCE2A-201ENST00000368779 RAD54L2Q9Y4B4 1467 aa34.65■■■■□ 3.14
LCE2A-201ENST00000368779 ZNF608Q9ULD9 1512 aaPredicted RBP34.63■■■■□ 3.13
LCE2A-201ENST00000368779 TARBP1Q13395 1621 aaKnown RBP34.59■■■■□ 3.13
LCE2A-201ENST00000368779 SYNJ1O43426 1573 aa34.54■■■■□ 3.12
LCE2A-201ENST00000368779 TOP2BQ02880 1626 aa34.54■■■■□ 3.12
LCE2A-201ENST00000368779 BIVM-ERCC5R4GMW8 1640 aa34.51■■■■□ 3.11
LCE2A-201ENST00000368779 AQRO60306 1485 aaKnown RBP eCLIP34.51■■■■□ 3.11
LCE2A-201ENST00000368779 TDRD9Q8NDG6 1382 aaKnown RBP34.49■■■■□ 3.11
LCE2A-201ENST00000368779 EIF4G3O43432 1585 aaKnown RBP34.45■■■■□ 3.1
LCE2A-201ENST00000368779 ABCA10Q8WWZ4 1543 aa34.37■■■■□ 3.09
LCE2A-201ENST00000368779 DNAJC5Q9H3Z4 198 aa34.35■■■■□ 3.09
LCE2A-201ENST00000368779 WDR97A6NE52 1622 aa34.33■■■■□ 3.09
LCE2A-201ENST00000368779 GAPVD1Q14C86 1478 aa34.27■■■■□ 3.08
LCE2A-201ENST00000368779 GRIN2BQ13224 1484 aa34.24■■■■□ 3.07
LCE2A-201ENST00000368779 OSCARQ8IYS5 282 aa34.22■■■■□ 3.07
LCE2A-201ENST00000368779 FBLN2P98095 1184 aa34.2■■■■□ 3.07
LCE2A-201ENST00000368779 ABCA5Q8WWZ7 1642 aa34.15■■■■□ 3.06
LCE2A-201ENST00000368779 SNAPC4Q5SXM2 1469 aa34.15■■■■□ 3.06
LCE2A-201ENST00000368779 TRIM41Q8WV44 630 aa34.13■■■■□ 3.05
LCE2A-201ENST00000368779 MAGI1Q96QZ7 1491 aaPredicted RBP34.11■■■■□ 3.05
LCE2A-201ENST00000368779 CHMP7Q8WUX9 453 aaPredicted RBP34.09■■■■□ 3.05
LCE2A-201ENST00000368779 PBRM1Q86U86 1689 aa34.08■■■■□ 3.05
LCE2A-201ENST00000368779 KIF27Q86VH2 1401 aa34.01■■■■□ 3.03
LCE2A-201ENST00000368779 SYNJ2O15056 1496 aa33.98■■■■□ 3.03
LCE2A-201ENST00000368779 CHD1O14646 1710 aa33.98■■■■□ 3.03
LCE2A-201ENST00000368779 ERICH3Q5RHP9 1530 aa33.95■■■■□ 3.03
LCE2A-201ENST00000368779 FHAD1B1AJZ9 1412 aa33.88■■■■□ 3.01
LCE2A-201ENST00000368779 ADAMTS12P58397 1594 aa33.84■■■■□ 3.01
LCE2A-201ENST00000368779 IGF1RP08069 1367 aa33.84■■■■□ 3.01
LCE2A-201ENST00000368779 GRIN2AQ12879 1464 aa33.77■■■■□ 3
LCE2A-201ENST00000368779 CHIC1Q5VXU3 224 aa33.75■■■□□ 2.99
LCE2A-201ENST00000368779 RUSC2Q8N2Y8 1516 aa33.69■■■□□ 2.98
LCE2A-201ENST00000368779 CARMIL1Q5VZK9 1371 aa33.68■■■□□ 2.98
LCE2A-201ENST00000368779 CUL7Q14999 1698 aa33.65■■■□□ 2.98
LCE2A-201ENST00000368779 CLASP1Q7Z460 1538 aa33.61■■■□□ 2.97
LCE2A-201ENST00000368779 NUP160Q12769 1436 aa33.6■■■□□ 2.97
LCE2A-201ENST00000368779 CEP170Q5SW79 1584 aa33.55■■■□□ 2.96
LCE2A-201ENST00000368779 ARHGEF11O15085 1522 aa33.52■■■□□ 2.96
LCE2A-201ENST00000368779 RIMBP3CA6NJZ7 1639 aa33.49■■■□□ 2.95
LCE2A-201ENST00000368779 RIMBP3BA6NNM3 1639 aa33.49■■■□□ 2.95
LCE2A-201ENST00000368779 RIMBP3Q9UFD9 1639 aa33.49■■■□□ 2.95
LCE2A-201ENST00000368779 RAPGEF2Q9Y4G8 1499 aa33.45■■■□□ 2.95
LCE2A-201ENST00000368779 CSRNP3Q8WYN3 585 aa33.45■■■□□ 2.95
LCE2A-201ENST00000368779 FAM9AQ8IZU1 332 aaPredicted RBP33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms