RNA–Protein interactions for RNA: ENST00000614929.4

SNX21-213, Transcript of sorting nexin family member 21, humanhuman

TSL 5 BASIC

Gene SNX21, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-213ENST00000614929 NISCHQ9Y2I1 1504 aa48.34■■■■■ 5.33
SNX21-213ENST00000614929 CCDC180Q9P1Z9 1646 aa43.37■■■■■ 4.53
SNX21-213ENST00000614929 ABCC9O60706 1549 aa42.93■■■■■ 4.46
SNX21-213ENST00000614929 RB1CC1Q8TDY2 1594 aa41.08■■■■■ 4.17
SNX21-213ENST00000614929 NACADO15069 1562 aa40.88■■■■■ 4.13
SNX21-213ENST00000614929 MYO15BQ96JP2 1530 aa40.47■■■■■ 4.07
SNX21-213ENST00000614929 DCAF8L2P0C7V8 631 aa40.46■■■■■ 4.07
SNX21-213ENST00000614929 UNC13AQ9UPW8 1703 aa40.24■■■■■ 4.03
SNX21-213ENST00000614929 ZCCHC6Q5VYS8 1495 aaKnown RBP40.13■■■■■ 4.02
SNX21-213ENST00000614929 DNAJC5BQ9UF47 199 aa40.05■■■■■ 4
SNX21-213ENST00000614929 DCAF1Q9Y4B6 1507 aa40.02■■■■■ 4
SNX21-213ENST00000614929 PABPN1Q86U42 306 aaKnown RBP eCLIP39.95■■■■□ 3.99
SNX21-213ENST00000614929 BICRAQ9NZM4 1560 aa39.9■■■■□ 3.98
SNX21-213ENST00000614929 SHROOM4Q9ULL8 1493 aa39.44■■■■□ 3.9
SNX21-213ENST00000614929 SCRIBQ14160 1630 aa39.39■■■■□ 3.9
SNX21-213ENST00000614929 CC2D2AQ9P2K1 1620 aa38.88■■■■□ 3.81
SNX21-213ENST00000614929 EIF4G1Q04637 1599 aaKnown RBP38.87■■■■□ 3.81
SNX21-213ENST00000614929 CECR2Q9BXF3 1484 aa38.68■■■■□ 3.78
SNX21-213ENST00000614929 NCAPD3P42695 1498 aa37.72■■■■□ 3.63
SNX21-213ENST00000614929 SMARCA4P51532 1647 aa37.67■■■■□ 3.62
SNX21-213ENST00000614929 ATAD2BQ9ULI0 1458 aa37.61■■■■□ 3.61
SNX21-213ENST00000614929 SMARCA2P51531 1590 aa37.55■■■■□ 3.6
SNX21-213ENST00000614929 BAZ1AQ9NRL2 1556 aaPredicted RBP37.51■■■■□ 3.6
SNX21-213ENST00000614929 HMGXB3Q12766 1538 aa37.49■■■■□ 3.59
SNX21-213ENST00000614929 PEG3Q9GZU2 1588 aa37.37■■■■□ 3.57
SNX21-213ENST00000614929 BAZ1BQ9UIG0 1483 aaKnown RBP37.24■■■■□ 3.55
SNX21-213ENST00000614929 MROH2BQ7Z745 1585 aa37.22■■■■□ 3.55
SNX21-213ENST00000614929 ERCC6Q03468 1493 aa37.05■■■■□ 3.52
SNX21-213ENST00000614929 CUX2O14529 1486 aa37■■■■□ 3.51
SNX21-213ENST00000614929 NESP48681 1621 aa36.97■■■■□ 3.51
SNX21-213ENST00000614929 LAMC3Q9Y6N6 1575 aa36.86■■■■□ 3.49
SNX21-213ENST00000614929 WIZO95785 1651 aa36.8■■■■□ 3.48
SNX21-213ENST00000614929 THOC2Q8NI27 1593 aaKnown RBP36.65■■■■□ 3.46
SNX21-213ENST00000614929 DNAJC5Q9H3Z4 198 aa36.63■■■■□ 3.45
SNX21-213ENST00000614929 KIF21AQ7Z4S6 1674 aa36.59■■■■□ 3.45
SNX21-213ENST00000614929 PDS5BQ9NTI5 1447 aa36.57■■■■□ 3.44
SNX21-213ENST00000614929 CADPSQ9ULU8 1353 aa36.54■■■■□ 3.44
SNX21-213ENST00000614929 RSF1Q96T23 1441 aaPredicted RBP36.53■■■■□ 3.44
SNX21-213ENST00000614929 TOP2AP11388 1531 aaKnown RBP36.37■■■■□ 3.41
SNX21-213ENST00000614929 MRC2Q9UBG0 1479 aa36.24■■■■□ 3.39
SNX21-213ENST00000614929 CFTRP13569 1480 aa36.21■■■■□ 3.39
SNX21-213ENST00000614929 WDR62O43379 1518 aa36.19■■■■□ 3.38
SNX21-213ENST00000614929 CEP164Q9UPV0 1460 aa36.15■■■■□ 3.38
SNX21-213ENST00000614929 FANCD2Q9BXW9 1451 aa36.11■■■■□ 3.37
SNX21-213ENST00000614929 PRDM2Q13029 1718 aa35.99■■■■□ 3.35
SNX21-213ENST00000614929 CCDC88BA6NC98 1476 aa35.91■■■■□ 3.34
SNX21-213ENST00000614929 URB2Q14146 1524 aaKnown RBP35.83■■■■□ 3.33
SNX21-213ENST00000614929 TOPBP1Q92547 1522 aa35.48■■■■□ 3.27
SNX21-213ENST00000614929 ABCC8Q09428 1581 aa35.47■■■■□ 3.27
SNX21-213ENST00000614929 IFT140Q96RY7 1462 aa35.43■■■■□ 3.26
SNX21-213ENST00000614929 DNMBPQ6XZF7 1577 aa35.4■■■■□ 3.26
SNX21-213ENST00000614929 ZNF608Q9ULD9 1512 aaPredicted RBP35.31■■■■□ 3.24
SNX21-213ENST00000614929 OSCARQ8IYS5 282 aa35.26■■■■□ 3.24
SNX21-213ENST00000614929 TARBP1Q13395 1621 aaKnown RBP35.2■■■■□ 3.23
SNX21-213ENST00000614929 EIF4G3O43432 1585 aaKnown RBP35.18■■■■□ 3.22
SNX21-213ENST00000614929 POLA1P09884 1462 aaPredicted RBP35.14■■■■□ 3.22
SNX21-213ENST00000614929 TRIM41Q8WV44 630 aa35■■■■□ 3.19
SNX21-213ENST00000614929 AQRO60306 1485 aaKnown RBP eCLIP35■■■■□ 3.19
SNX21-213ENST00000614929 CUX1P39880 1505 aa34.96■■■■□ 3.19
SNX21-213ENST00000614929 RAD54L2Q9Y4B4 1467 aa34.95■■■■□ 3.19
SNX21-213ENST00000614929 SUPT5HO00267 1087 aaKnown RBP34.94■■■■□ 3.18
SNX21-213ENST00000614929 SOGA1O94964 1423 aa34.94■■■■□ 3.18
SNX21-213ENST00000614929 FGD5Q6ZNL6 1462 aa34.93■■■■□ 3.18
SNX21-213ENST00000614929 WDR97A6NE52 1622 aa34.92■■■■□ 3.18
SNX21-213ENST00000614929 CHD1O14646 1710 aa34.9■■■■□ 3.18
SNX21-213ENST00000614929 RIMBP3CA6NJZ7 1639 aa34.85■■■■□ 3.17
SNX21-213ENST00000614929 RIMBP3BA6NNM3 1639 aa34.85■■■■□ 3.17
SNX21-213ENST00000614929 RIMBP3Q9UFD9 1639 aa34.85■■■■□ 3.17
SNX21-213ENST00000614929 TDRD9Q8NDG6 1382 aaKnown RBP34.8■■■■□ 3.16
SNX21-213ENST00000614929 ARHGEF11O15085 1522 aa34.75■■■■□ 3.15
SNX21-213ENST00000614929 SNAPC4Q5SXM2 1469 aa34.68■■■■□ 3.14
SNX21-213ENST00000614929 MAGI1Q96QZ7 1491 aaPredicted RBP34.65■■■■□ 3.14
SNX21-213ENST00000614929 GRIN2BQ13224 1484 aa34.65■■■■□ 3.14
SNX21-213ENST00000614929 FBLN2P98095 1184 aa34.62■■■■□ 3.13
SNX21-213ENST00000614929 PBRM1Q86U86 1689 aa34.59■■■■□ 3.13
SNX21-213ENST00000614929 ABCA10Q8WWZ4 1543 aa34.59■■■■□ 3.13
SNX21-213ENST00000614929 ABCA5Q8WWZ7 1642 aa34.55■■■■□ 3.12
SNX21-213ENST00000614929 GAPVD1Q14C86 1478 aa34.54■■■■□ 3.12
SNX21-213ENST00000614929 BIVM-ERCC5R4GMW8 1640 aa34.54■■■■□ 3.12
SNX21-213ENST00000614929 TOP2BQ02880 1626 aa34.51■■■■□ 3.11
SNX21-213ENST00000614929 SYNJ2O15056 1496 aa34.51■■■■□ 3.11
SNX21-213ENST00000614929 CLASP1Q7Z460 1538 aa34.5■■■■□ 3.11
SNX21-213ENST00000614929 SYNJ1O43426 1573 aa34.49■■■■□ 3.11
SNX21-213ENST00000614929 CHMP7Q8WUX9 453 aaPredicted RBP34.47■■■■□ 3.11
SNX21-213ENST00000614929 WRNQ14191 1432 aaPredicted RBP eCLIP34.46■■■■□ 3.11
SNX21-213ENST00000614929 ARAP1Q96P48 1450 aa34.42■■■■□ 3.1
SNX21-213ENST00000614929 CYB5RLQ6IPT4 315 aa34.37■■■■□ 3.09
SNX21-213ENST00000614929 ADAMTS12P58397 1594 aa34.25■■■■□ 3.07
SNX21-213ENST00000614929 GRIN2AQ12879 1464 aa34.2■■■■□ 3.07
SNX21-213ENST00000614929 ERICH3Q5RHP9 1530 aa34.18■■■■□ 3.06
SNX21-213ENST00000614929 FHAD1B1AJZ9 1412 aa34.13■■■■□ 3.05
SNX21-213ENST00000614929 NUP160Q12769 1436 aa34.11■■■■□ 3.05
SNX21-213ENST00000614929 CEP170Q5SW79 1584 aa34.08■■■■□ 3.05
SNX21-213ENST00000614929 SHROOM2Q13796 1616 aa33.98■■■■□ 3.03
SNX21-213ENST00000614929 ERCC6L2Q5T890 1561 aa33.93■■■■□ 3.02
SNX21-213ENST00000614929 TRHP20396 242 aaPredicted RBP33.87■■■■□ 3.01
SNX21-213ENST00000614929 KIF27Q86VH2 1401 aa33.78■■■■□ 3
SNX21-213ENST00000614929 RUSC2Q8N2Y8 1516 aa33.77■■■■□ 3
SNX21-213ENST00000614929 CUL7Q14999 1698 aa33.75■■■□□ 2.99
SNX21-213ENST00000614929 IGF1RP08069 1367 aa33.73■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms