RNA–Protein interactions for RNA: ENST00000392023.1

SPTBN4-203, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 1 (best) BASIC

Gene SPTBN4, Length 2,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-203ENST00000392023 NISCHQ9Y2I1 1504 aa45.84■■■■■ 4.93
SPTBN4-203ENST00000392023 CCDC180Q9P1Z9 1646 aa39.23■■■■□ 3.87
SPTBN4-203ENST00000392023 SHROOM4Q9ULL8 1493 aa38.73■■■■□ 3.79
SPTBN4-203ENST00000392023 ZCCHC6Q5VYS8 1495 aaKnown RBP38.59■■■■□ 3.77
SPTBN4-203ENST00000392023 DCAF8L2P0C7V8 631 aa38.48■■■■□ 3.75
SPTBN4-203ENST00000392023 SUPT5HO00267 1087 aaKnown RBP37.64■■■■□ 3.62
SPTBN4-203ENST00000392023 DCAF1Q9Y4B6 1507 aa37.51■■■■□ 3.6
SPTBN4-203ENST00000392023 ABCC9O60706 1549 aa37.17■■■■□ 3.54
SPTBN4-203ENST00000392023 SCRIBQ14160 1630 aa36.79■■■■□ 3.48
SPTBN4-203ENST00000392023 MYO15BQ96JP2 1530 aa36.69■■■■□ 3.46
SPTBN4-203ENST00000392023 NACADO15069 1562 aa36.48■■■■□ 3.43
SPTBN4-203ENST00000392023 CHIC1Q5VXU3 224 aa36.15■■■■□ 3.38
SPTBN4-203ENST00000392023 RB1CC1Q8TDY2 1594 aa36.07■■■■□ 3.37
SPTBN4-203ENST00000392023 RSF1Q96T23 1441 aaPredicted RBP36.02■■■■□ 3.36
SPTBN4-203ENST00000392023 CECR2Q9BXF3 1484 aa35.89■■■■□ 3.34
SPTBN4-203ENST00000392023 MROH2BQ7Z745 1585 aa35.65■■■■□ 3.3
SPTBN4-203ENST00000392023 UNC13AQ9UPW8 1703 aa35.55■■■■□ 3.28
SPTBN4-203ENST00000392023 PABPN1Q86U42 306 aaKnown RBP eCLIP35.47■■■■□ 3.27
SPTBN4-203ENST00000392023 WIZO95785 1651 aa35.43■■■■□ 3.26
SPTBN4-203ENST00000392023 BAZ1AQ9NRL2 1556 aaPredicted RBP35.24■■■■□ 3.23
SPTBN4-203ENST00000392023 LOC105371045A0A1W2PR82 267 aa35.15■■■■□ 3.22
SPTBN4-203ENST00000392023 BICRAQ9NZM4 1560 aa35.14■■■■□ 3.22
SPTBN4-203ENST00000392023 TRIM41Q8WV44 630 aa35.06■■■■□ 3.2
SPTBN4-203ENST00000392023 SMARCA4P51532 1647 aa35.05■■■■□ 3.2
SPTBN4-203ENST00000392023 FAM9AQ8IZU1 332 aaPredicted RBP34.84■■■■□ 3.17
SPTBN4-203ENST00000392023 TOP2AP11388 1531 aaKnown RBP34.78■■■■□ 3.16
SPTBN4-203ENST00000392023 CCDC88BA6NC98 1476 aa34.69■■■■□ 3.14
SPTBN4-203ENST00000392023 EHMT2Q96KQ7 1210 aa34.64■■■■□ 3.14
SPTBN4-203ENST00000392023 SMARCA2P51531 1590 aa34.59■■■■□ 3.13
SPTBN4-203ENST00000392023 EIF4G1Q04637 1599 aaKnown RBP34.49■■■■□ 3.11
SPTBN4-203ENST00000392023 ABCC8Q09428 1581 aa34.39■■■■□ 3.1
SPTBN4-203ENST00000392023 ATAD2BQ9ULI0 1458 aa34.36■■■■□ 3.09
SPTBN4-203ENST00000392023 PEG3Q9GZU2 1588 aa34.35■■■■□ 3.09
SPTBN4-203ENST00000392023 PCGF6Q9BYE7 350 aa34.33■■■■□ 3.09
SPTBN4-203ENST00000392023 BAZ1BQ9UIG0 1483 aaKnown RBP34.24■■■■□ 3.07
SPTBN4-203ENST00000392023 SOGA1O94964 1423 aa33.94■■■■□ 3.02
SPTBN4-203ENST00000392023 WRNQ14191 1432 aaPredicted RBP eCLIP33.86■■■■□ 3.01
SPTBN4-203ENST00000392023 RUSC2Q8N2Y8 1516 aa33.83■■■■□ 3.01
SPTBN4-203ENST00000392023 NCAPD3P42695 1498 aa33.8■■■■□ 3
SPTBN4-203ENST00000392023 TRIM26Q12899 539 aaPredicted RBP33.75■■■□□ 2.99
SPTBN4-203ENST00000392023 SYNJ1O43426 1573 aa33.71■■■□□ 2.99
SPTBN4-203ENST00000392023 HRCP23327 699 aa33.68■■■□□ 2.98
SPTBN4-203ENST00000392023 HMGXB3Q12766 1538 aa33.68■■■□□ 2.98
SPTBN4-203ENST00000392023 PPARGC1BQ86YN6 1023 aaKnown RBP33.68■■■□□ 2.98
SPTBN4-203ENST00000392023 CSRNP3Q8WYN3 585 aa33.67■■■□□ 2.98
SPTBN4-203ENST00000392023 UBTFP17480 764 aaKnown RBP33.53■■■□□ 2.96
SPTBN4-203ENST00000392023 EEA1Q15075 1411 aa33.47■■■□□ 2.95
SPTBN4-203ENST00000392023 CC2D2AQ9P2K1 1620 aa33.41■■■□□ 2.94
SPTBN4-203ENST00000392023 CEP162Q5TB80 1403 aa33.36■■■□□ 2.93
SPTBN4-203ENST00000392023 TNIKQ9UKE5 1360 aa33.34■■■□□ 2.93
SPTBN4-203ENST00000392023 CFTRP13569 1480 aa33.33■■■□□ 2.93
SPTBN4-203ENST00000392023 TOP2BQ02880 1626 aa33.32■■■□□ 2.92
SPTBN4-203ENST00000392023 PELP1Q8IZL8 1130 aaKnown RBP33.3■■■□□ 2.92
SPTBN4-203ENST00000392023 TTBK1Q5TCY1 1321 aaPredicted RBP33.29■■■□□ 2.92
SPTBN4-203ENST00000392023 GOLGA3Q08378 1498 aa33.27■■■□□ 2.92
SPTBN4-203ENST00000392023 CUX1P39880 1505 aa33.21■■■□□ 2.91
SPTBN4-203ENST00000392023 RANGAP1P46060 587 aaPredicted RBP33.19■■■□□ 2.9
SPTBN4-203ENST00000392023 BIVM-ERCC5R4GMW8 1640 aa33.18■■■□□ 2.9
SPTBN4-203ENST00000392023 CEP164Q9UPV0 1460 aa33.16■■■□□ 2.9
SPTBN4-203ENST00000392023 CADPSQ9ULU8 1353 aa33.14■■■□□ 2.9
SPTBN4-203ENST00000392023 RAPGEF2Q9Y4G8 1499 aa33.11■■■□□ 2.89
SPTBN4-203ENST00000392023 KIF21BO75037 1637 aa33.06■■■□□ 2.88
SPTBN4-203ENST00000392023 DNAJC5BQ9UF47 199 aa32.97■■■□□ 2.87
SPTBN4-203ENST00000392023 PRDM2Q13029 1718 aa32.94■■■□□ 2.86
SPTBN4-203ENST00000392023 CLIP1P30622 1438 aa32.91■■■□□ 2.86
SPTBN4-203ENST00000392023 NESP48681 1621 aa32.9■■■□□ 2.86
SPTBN4-203ENST00000392023 KIF27Q86VH2 1401 aa32.86■■■□□ 2.85
SPTBN4-203ENST00000392023 FANCD2Q9BXW9 1451 aa32.82■■■□□ 2.84
SPTBN4-203ENST00000392023 PRXQ9BXM0 1461 aa32.8■■■□□ 2.84
SPTBN4-203ENST00000392023 CUX2O14529 1486 aa32.75■■■□□ 2.83
SPTBN4-203ENST00000392023 FGD5Q6ZNL6 1462 aa32.75■■■□□ 2.83
SPTBN4-203ENST00000392023 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.68■■■□□ 2.82
SPTBN4-203ENST00000392023 ERICH3Q5RHP9 1530 aa32.67■■■□□ 2.82
SPTBN4-203ENST00000392023 VPS8Q8N3P4 1428 aa32.63■■■□□ 2.81
SPTBN4-203ENST00000392023 IGF1RP08069 1367 aa32.63■■■□□ 2.81
SPTBN4-203ENST00000392023 RAD54L2Q9Y4B4 1467 aa32.57■■■□□ 2.8
SPTBN4-203ENST00000392023 ZEB1P37275 1124 aaPredicted RBP32.57■■■□□ 2.8
SPTBN4-203ENST00000392023 APLP2Q06481 763 aa32.56■■■□□ 2.8
SPTBN4-203ENST00000392023 TOPBP1Q92547 1522 aa32.51■■■□□ 2.8
SPTBN4-203ENST00000392023 CCER1Q8TC90 406 aaPredicted RBP32.49■■■□□ 2.79
SPTBN4-203ENST00000392023 DNMBPQ6XZF7 1577 aa32.48■■■□□ 2.79
SPTBN4-203ENST00000392023 CARMIL1Q5VZK9 1371 aa32.47■■■□□ 2.79
SPTBN4-203ENST00000392023 POLA1P09884 1462 aaPredicted RBP32.46■■■□□ 2.79
SPTBN4-203ENST00000392023 ARAP1Q96P48 1450 aa32.45■■■□□ 2.79
SPTBN4-203ENST00000392023 LAMC3Q9Y6N6 1575 aa32.45■■■□□ 2.78
SPTBN4-203ENST00000392023 URB2Q14146 1524 aaKnown RBP32.39■■■□□ 2.78
SPTBN4-203ENST00000392023 HNRNPUL2Q1KMD3 747 aaKnown RBP32.36■■■□□ 2.77
SPTBN4-203ENST00000392023 PDS5BQ9NTI5 1447 aa32.32■■■□□ 2.76
SPTBN4-203ENST00000392023 ARHGAP35Q9NRY4 1499 aa32.32■■■□□ 2.76
SPTBN4-203ENST00000392023 KANK4Q5T7N3 995 aaPredicted RBP32.3■■■□□ 2.76
SPTBN4-203ENST00000392023 ABCA10Q8WWZ4 1543 aa32.3■■■□□ 2.76
SPTBN4-203ENST00000392023 MYT1Q01538 1121 aa32.26■■■□□ 2.76
SPTBN4-203ENST00000392023 KIF21AQ7Z4S6 1674 aa32.26■■■□□ 2.75
SPTBN4-203ENST00000392023 TDRD9Q8NDG6 1382 aaKnown RBP32.26■■■□□ 2.75
SPTBN4-203ENST00000392023 P3H3Q8IVL6 736 aa32.25■■■□□ 2.75
SPTBN4-203ENST00000392023 ATP1B4Q9UN42 357 aaPredicted RBP32.05■■■□□ 2.72
SPTBN4-203ENST00000392023 WDR97A6NE52 1622 aa32.02■■■□□ 2.72
SPTBN4-203ENST00000392023 GAPVD1Q14C86 1478 aa32.01■■■□□ 2.72
SPTBN4-203ENST00000392023 CUL7Q14999 1698 aa31.95■■■□□ 2.71
SPTBN4-203ENST00000392023 ABCA5Q8WWZ7 1642 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms