Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
PTCH2Q9Y6C5 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
PTCH2Q9Y6C5 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
PTCH2Q9Y6C5 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
PTCH2Q9Y6C5 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
PTCH2Q9Y6C5 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.52■■■□□ 2.48
PTCH2Q9Y6C5 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
PTCH2Q9Y6C5 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.51■■■□□ 2.47
PTCH2Q9Y6C5 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
PTCH2Q9Y6C5 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.5■■■□□ 2.47
PTCH2Q9Y6C5 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.5■■■□□ 2.47
PTCH2Q9Y6C5 GPX1-201ENST00000419349 1106 ntBASIC30.49■■■□□ 2.47
PTCH2Q9Y6C5 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.48■■■□□ 2.47
PTCH2Q9Y6C5 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PTCH2Q9Y6C5 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
PTCH2Q9Y6C5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
PTCH2Q9Y6C5 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
PTCH2Q9Y6C5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC30.45■■■□□ 2.46
PTCH2Q9Y6C5 RNF126P1-201ENST00000567452 1320 ntBASIC30.44■■■□□ 2.46
PTCH2Q9Y6C5 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
PTCH2Q9Y6C5 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
PTCH2Q9Y6C5 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
PTCH2Q9Y6C5 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
PTCH2Q9Y6C5 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC30.42■■■□□ 2.46
PTCH2Q9Y6C5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.42■■■□□ 2.46
PTCH2Q9Y6C5 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
PTCH2Q9Y6C5 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.4■■■□□ 2.46
PTCH2Q9Y6C5 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
PTCH2Q9Y6C5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC30.38■■■□□ 2.45
PTCH2Q9Y6C5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC30.38■■■□□ 2.45
PTCH2Q9Y6C5 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
PTCH2Q9Y6C5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC30.38■■■□□ 2.45
PTCH2Q9Y6C5 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
PTCH2Q9Y6C5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.37■■■□□ 2.45
PTCH2Q9Y6C5 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.36■■■□□ 2.45
PTCH2Q9Y6C5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.36■■■□□ 2.45
PTCH2Q9Y6C5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
PTCH2Q9Y6C5 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
PTCH2Q9Y6C5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC30.34■■■□□ 2.45
PTCH2Q9Y6C5 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.33■■■□□ 2.45
PTCH2Q9Y6C5 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.32■■■□□ 2.44
PTCH2Q9Y6C5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC30.32■■■□□ 2.44
PTCH2Q9Y6C5 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
PTCH2Q9Y6C5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
PTCH2Q9Y6C5 AC012354.3-201ENST00000623734 483 ntBASIC30.3■■■□□ 2.44
PTCH2Q9Y6C5 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.3■■■□□ 2.44
PTCH2Q9Y6C5 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PTCH2Q9Y6C5 CEP120-209ENST00000515110 606 ntTSL 3 BASIC30.29■■■□□ 2.44
PTCH2Q9Y6C5 NTF6A-201ENST00000591175 560 ntBASIC30.29■■■□□ 2.44
PTCH2Q9Y6C5 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
PTCH2Q9Y6C5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC30.29■■■□□ 2.44
PTCH2Q9Y6C5 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
PTCH2Q9Y6C5 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC30.27■■■□□ 2.44
PTCH2Q9Y6C5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC30.27■■■□□ 2.44
PTCH2Q9Y6C5 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PTCH2Q9Y6C5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
PTCH2Q9Y6C5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.43
PTCH2Q9Y6C5 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC30.26■■■□□ 2.43
PTCH2Q9Y6C5 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
PTCH2Q9Y6C5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
PTCH2Q9Y6C5 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC30.25■■■□□ 2.43
PTCH2Q9Y6C5 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC30.24■■■□□ 2.43
PTCH2Q9Y6C5 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.23■■■□□ 2.43
PTCH2Q9Y6C5 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
PTCH2Q9Y6C5 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
PTCH2Q9Y6C5 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC30.21■■■□□ 2.43
PTCH2Q9Y6C5 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
PTCH2Q9Y6C5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC30.2■■■□□ 2.43
PTCH2Q9Y6C5 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.2■■■□□ 2.43
PTCH2Q9Y6C5 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
PTCH2Q9Y6C5 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
PTCH2Q9Y6C5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
PTCH2Q9Y6C5 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
PTCH2Q9Y6C5 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
PTCH2Q9Y6C5 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
PTCH2Q9Y6C5 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
PTCH2Q9Y6C5 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
PTCH2Q9Y6C5 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
PTCH2Q9Y6C5 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
PTCH2Q9Y6C5 AC022413.1-201ENST00000624602 984 ntBASIC30.11■■■□□ 2.41
PTCH2Q9Y6C5 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC30.1■■■□□ 2.41
PTCH2Q9Y6C5 AC008813.1-201ENST00000536597 885 ntBASIC30.1■■■□□ 2.41
PTCH2Q9Y6C5 AL033527.3-201ENST00000566366 1196 ntBASIC30.1■■■□□ 2.41
PTCH2Q9Y6C5 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
PTCH2Q9Y6C5 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC30.1■■■□□ 2.41
PTCH2Q9Y6C5 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PTCH2Q9Y6C5 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC30.09■■■□□ 2.41
PTCH2Q9Y6C5 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PTCH2Q9Y6C5 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
PTCH2Q9Y6C5 AC018358.1-201ENST00000631079 1402 ntBASIC30.09■■■□□ 2.41
PTCH2Q9Y6C5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC30.08■■■□□ 2.41
PTCH2Q9Y6C5 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PTCH2Q9Y6C5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
PTCH2Q9Y6C5 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC30.07■■■□□ 2.4
PTCH2Q9Y6C5 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
PTCH2Q9Y6C5 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
PTCH2Q9Y6C5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC30.06■■■□□ 2.4
PTCH2Q9Y6C5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC30.06■■■□□ 2.4
PTCH2Q9Y6C5 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
PTCH2Q9Y6C5 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms