Protein–RNA interactions for Protein: Q9Y5G8

PCDHGA5, Protocadherin gamma-A5, humanhuman

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA5Q9Y5G8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGA5Q9Y5G8 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.39■■□□□ 1.82
PCDHGA5Q9Y5G8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGA5Q9Y5G8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGA5Q9Y5G8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGA5Q9Y5G8 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.39■■□□□ 1.82
PCDHGA5Q9Y5G8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGA5Q9Y5G8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
PCDHGA5Q9Y5G8 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
PCDHGA5Q9Y5G8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC26.38■■□□□ 1.81
PCDHGA5Q9Y5G8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PCDHGA5Q9Y5G8 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.36■■□□□ 1.81
PCDHGA5Q9Y5G8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.34■■□□□ 1.81
PCDHGA5Q9Y5G8 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGA5Q9Y5G8 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
PCDHGA5Q9Y5G8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.33■■□□□ 1.81
PCDHGA5Q9Y5G8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
PCDHGA5Q9Y5G8 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGA5Q9Y5G8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PCDHGA5Q9Y5G8 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGA5Q9Y5G8 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGA5Q9Y5G8 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
PCDHGA5Q9Y5G8 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
PCDHGA5Q9Y5G8 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.29■■□□□ 1.8
PCDHGA5Q9Y5G8 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.27■■□□□ 1.8
PCDHGA5Q9Y5G8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHGA5Q9Y5G8 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
PCDHGA5Q9Y5G8 RNF126P1-201ENST00000567452 1320 ntBASIC26.26■■□□□ 1.79
PCDHGA5Q9Y5G8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGA5Q9Y5G8 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
PCDHGA5Q9Y5G8 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
PCDHGA5Q9Y5G8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.26■■□□□ 1.79
PCDHGA5Q9Y5G8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.26■■□□□ 1.79
PCDHGA5Q9Y5G8 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
PCDHGA5Q9Y5G8 GPX1-201ENST00000419349 1106 ntBASIC26.25■■□□□ 1.79
PCDHGA5Q9Y5G8 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.25■■□□□ 1.79
PCDHGA5Q9Y5G8 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC26.24■■□□□ 1.79
PCDHGA5Q9Y5G8 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC26.23■■□□□ 1.79
PCDHGA5Q9Y5G8 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
PCDHGA5Q9Y5G8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
PCDHGA5Q9Y5G8 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
PCDHGA5Q9Y5G8 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.21■■□□□ 1.79
PCDHGA5Q9Y5G8 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHGA5Q9Y5G8 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
PCDHGA5Q9Y5G8 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
PCDHGA5Q9Y5G8 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
PCDHGA5Q9Y5G8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.21■■□□□ 1.79
PCDHGA5Q9Y5G8 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
PCDHGA5Q9Y5G8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHGA5Q9Y5G8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHGA5Q9Y5G8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
PCDHGA5Q9Y5G8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHGA5Q9Y5G8 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHGA5Q9Y5G8 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
PCDHGA5Q9Y5G8 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
PCDHGA5Q9Y5G8 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
PCDHGA5Q9Y5G8 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
PCDHGA5Q9Y5G8 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.17■■□□□ 1.78
PCDHGA5Q9Y5G8 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
PCDHGA5Q9Y5G8 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.15■■□□□ 1.78
PCDHGA5Q9Y5G8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.14■■□□□ 1.78
PCDHGA5Q9Y5G8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
PCDHGA5Q9Y5G8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.13■■□□□ 1.77
PCDHGA5Q9Y5G8 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
PCDHGA5Q9Y5G8 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.12■■□□□ 1.77
PCDHGA5Q9Y5G8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
PCDHGA5Q9Y5G8 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
PCDHGA5Q9Y5G8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
PCDHGA5Q9Y5G8 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
PCDHGA5Q9Y5G8 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC26.1■■□□□ 1.77
PCDHGA5Q9Y5G8 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGA5Q9Y5G8 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.09■■□□□ 1.77
PCDHGA5Q9Y5G8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.09■■□□□ 1.77
PCDHGA5Q9Y5G8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.09■■□□□ 1.77
PCDHGA5Q9Y5G8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
PCDHGA5Q9Y5G8 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
PCDHGA5Q9Y5G8 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.08■■□□□ 1.77
PCDHGA5Q9Y5G8 NTF6A-201ENST00000591175 560 ntBASIC26.07■■□□□ 1.76
PCDHGA5Q9Y5G8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC26.06■■□□□ 1.76
PCDHGA5Q9Y5G8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.06■■□□□ 1.76
PCDHGA5Q9Y5G8 AC012354.3-201ENST00000623734 483 ntBASIC26.06■■□□□ 1.76
PCDHGA5Q9Y5G8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
PCDHGA5Q9Y5G8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGA5Q9Y5G8 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
PCDHGA5Q9Y5G8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.05■■□□□ 1.76
PCDHGA5Q9Y5G8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC26.05■■□□□ 1.76
PCDHGA5Q9Y5G8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGA5Q9Y5G8 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
PCDHGA5Q9Y5G8 HES4-202ENST00000428771 1040 ntTSL 2 BASIC26.04■■□□□ 1.76
PCDHGA5Q9Y5G8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
PCDHGA5Q9Y5G8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.03■■□□□ 1.76
PCDHGA5Q9Y5G8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
PCDHGA5Q9Y5G8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.03■■□□□ 1.76
PCDHGA5Q9Y5G8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.02■■□□□ 1.76
PCDHGA5Q9Y5G8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.02■■□□□ 1.76
PCDHGA5Q9Y5G8 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHGA5Q9Y5G8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
PCDHGA5Q9Y5G8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
PCDHGA5Q9Y5G8 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
PCDHGA5Q9Y5G8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 94.7 ms