Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC34.95■■■■□ 3.19
SPG7Q9UQ90 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
SPG7Q9UQ90 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC34.93■■■■□ 3.18
SPG7Q9UQ90 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC34.93■■■■□ 3.18
SPG7Q9UQ90 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC34.92■■■■□ 3.18
SPG7Q9UQ90 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC34.92■■■■□ 3.18
SPG7Q9UQ90 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC34.92■■■■□ 3.18
SPG7Q9UQ90 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC34.91■■■■□ 3.18
SPG7Q9UQ90 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
SPG7Q9UQ90 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC34.91■■■■□ 3.18
SPG7Q9UQ90 EI24-212ENST00000615917 1407 ntTSL 2 BASIC34.9■■■■□ 3.18
SPG7Q9UQ90 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC34.9■■■■□ 3.18
SPG7Q9UQ90 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC34.9■■■■□ 3.18
SPG7Q9UQ90 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC34.9■■■■□ 3.18
SPG7Q9UQ90 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
SPG7Q9UQ90 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC34.89■■■■□ 3.18
SPG7Q9UQ90 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
SPG7Q9UQ90 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC34.89■■■■□ 3.18
SPG7Q9UQ90 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC34.87■■■■□ 3.17
SPG7Q9UQ90 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC34.86■■■■□ 3.17
SPG7Q9UQ90 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC34.86■■■■□ 3.17
SPG7Q9UQ90 DUX4L13-201ENST00000554103 1267 ntBASIC34.85■■■■□ 3.17
SPG7Q9UQ90 DUX4L15-201ENST00000611059 1267 ntBASIC34.85■■■■□ 3.17
SPG7Q9UQ90 DUX4L23-201ENST00000615195 1269 ntBASIC34.85■■■■□ 3.17
SPG7Q9UQ90 DUX4L24-201ENST00000617576 1269 ntBASIC34.85■■■■□ 3.17
SPG7Q9UQ90 DUX4L22-201ENST00000618238 1269 ntBASIC34.85■■■■□ 3.17
SPG7Q9UQ90 DUX4L20-201ENST00000619712 1269 ntBASIC34.85■■■■□ 3.17
SPG7Q9UQ90 DUX4L21-201ENST00000622058 1269 ntBASIC34.85■■■■□ 3.17
SPG7Q9UQ90 DUX4L10-201ENST00000622460 1267 ntBASIC34.85■■■■□ 3.17
SPG7Q9UQ90 DUX4L25-201ENST00000624915 1269 ntBASIC34.85■■■■□ 3.17
SPG7Q9UQ90 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
SPG7Q9UQ90 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC34.84■■■■□ 3.17
SPG7Q9UQ90 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC34.82■■■■□ 3.17
SPG7Q9UQ90 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.17
SPG7Q9UQ90 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC34.81■■■■□ 3.16
SPG7Q9UQ90 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC34.81■■■■□ 3.16
SPG7Q9UQ90 HSD17B1P1-201ENST00000590052 955 ntBASIC34.81■■■■□ 3.16
SPG7Q9UQ90 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC34.81■■■■□ 3.16
SPG7Q9UQ90 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
SPG7Q9UQ90 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.8■■■■□ 3.16
SPG7Q9UQ90 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
SPG7Q9UQ90 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC34.78■■■■□ 3.16
SPG7Q9UQ90 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC34.78■■■■□ 3.16
SPG7Q9UQ90 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC34.78■■■■□ 3.16
SPG7Q9UQ90 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
SPG7Q9UQ90 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
SPG7Q9UQ90 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC34.75■■■■□ 3.15
SPG7Q9UQ90 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC34.75■■■■□ 3.15
SPG7Q9UQ90 AL161658.1-201ENST00000623641 1967 ntBASIC34.73■■■■□ 3.15
SPG7Q9UQ90 METRNL-202ENST00000570778 967 ntTSL 5 BASIC34.73■■■■□ 3.15
SPG7Q9UQ90 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC34.72■■■■□ 3.15
SPG7Q9UQ90 HES6-205ENST00000409356 528 ntTSL 2 BASIC34.72■■■■□ 3.15
SPG7Q9UQ90 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC34.72■■■■□ 3.15
SPG7Q9UQ90 CHML-204ENST00000638121 920 ntTSL 2 BASIC34.72■■■■□ 3.15
SPG7Q9UQ90 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC34.72■■■■□ 3.15
SPG7Q9UQ90 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
SPG7Q9UQ90 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC34.71■■■■□ 3.15
SPG7Q9UQ90 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC34.71■■■■□ 3.15
SPG7Q9UQ90 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC34.7■■■■□ 3.15
SPG7Q9UQ90 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC34.7■■■■□ 3.14
SPG7Q9UQ90 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC34.69■■■■□ 3.14
SPG7Q9UQ90 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC34.69■■■■□ 3.14
SPG7Q9UQ90 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC34.69■■■■□ 3.14
SPG7Q9UQ90 ABHD17AP3-201ENST00000503096 1137 ntBASIC34.68■■■■□ 3.14
SPG7Q9UQ90 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC34.67■■■■□ 3.14
SPG7Q9UQ90 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC34.67■■■■□ 3.14
SPG7Q9UQ90 BRD4-212ENST00000630599 726 ntTSL 2 BASIC34.66■■■■□ 3.14
SPG7Q9UQ90 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC34.66■■■■□ 3.14
SPG7Q9UQ90 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC34.66■■■■□ 3.14
SPG7Q9UQ90 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC34.66■■■■□ 3.14
SPG7Q9UQ90 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC34.64■■■■□ 3.14
SPG7Q9UQ90 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
SPG7Q9UQ90 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC34.62■■■■□ 3.13
SPG7Q9UQ90 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
SPG7Q9UQ90 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC34.6■■■■□ 3.13
SPG7Q9UQ90 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC34.6■■■■□ 3.13
SPG7Q9UQ90 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC34.6■■■■□ 3.13
SPG7Q9UQ90 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC34.59■■■■□ 3.13
SPG7Q9UQ90 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
SPG7Q9UQ90 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
SPG7Q9UQ90 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC34.58■■■■□ 3.13
SPG7Q9UQ90 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC34.58■■■■□ 3.13
SPG7Q9UQ90 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC34.58■■■■□ 3.13
SPG7Q9UQ90 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC34.57■■■■□ 3.13
SPG7Q9UQ90 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC34.57■■■■□ 3.12
SPG7Q9UQ90 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC34.57■■■■□ 3.12
SPG7Q9UQ90 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
SPG7Q9UQ90 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
SPG7Q9UQ90 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC34.55■■■■□ 3.12
SPG7Q9UQ90 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC34.55■■■■□ 3.12
SPG7Q9UQ90 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC34.55■■■■□ 3.12
SPG7Q9UQ90 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
SPG7Q9UQ90 LINC00273-201ENST00000539813 1452 ntBASIC34.54■■■■□ 3.12
SPG7Q9UQ90 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
SPG7Q9UQ90 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
SPG7Q9UQ90 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC34.53■■■■□ 3.12
SPG7Q9UQ90 AC010864.1-201ENST00000609407 1511 ntBASIC34.53■■■■□ 3.12
SPG7Q9UQ90 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
SPG7Q9UQ90 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC34.51■■■■□ 3.12
SPG7Q9UQ90 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC34.51■■■■□ 3.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms