Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
MACF1Q9UPN3 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC11.47□□□□□ -0.57
MACF1Q9UPN3 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
MACF1Q9UPN3 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC11.46□□□□□ -0.57
MACF1Q9UPN3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
MACF1Q9UPN3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC11.46□□□□□ -0.57
MACF1Q9UPN3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC11.45□□□□□ -0.58
MACF1Q9UPN3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC11.45□□□□□ -0.58
MACF1Q9UPN3 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC11.45□□□□□ -0.58
MACF1Q9UPN3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
MACF1Q9UPN3 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
MACF1Q9UPN3 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
MACF1Q9UPN3 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
MACF1Q9UPN3 ATP5G2P3-201ENST00000429083 425 ntBASIC11.44□□□□□ -0.58
MACF1Q9UPN3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
MACF1Q9UPN3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
MACF1Q9UPN3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC11.43□□□□□ -0.58
MACF1Q9UPN3 LSM7-203ENST00000585409 512 ntTSL 2 BASIC11.43□□□□□ -0.58
MACF1Q9UPN3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
MACF1Q9UPN3 AC025884.2-201ENST00000553429 711 ntBASIC11.42□□□□□ -0.58
MACF1Q9UPN3 AC108673.1-201ENST00000510422 1159 ntBASIC11.42□□□□□ -0.58
MACF1Q9UPN3 THA1P-201ENST00000590384 1145 ntBASIC11.42□□□□□ -0.58
MACF1Q9UPN3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC11.42□□□□□ -0.58
MACF1Q9UPN3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MACF1Q9UPN3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
MACF1Q9UPN3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC11.41□□□□□ -0.58
MACF1Q9UPN3 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
MACF1Q9UPN3 MIR6090-201ENST00000622481 60 ntBASIC11.41□□□□□ -0.58
MACF1Q9UPN3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
MACF1Q9UPN3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC11.4□□□□□ -0.58
MACF1Q9UPN3 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
MACF1Q9UPN3 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
MACF1Q9UPN3 KRT18P60-201ENST00000312876 1297 ntBASIC11.4□□□□□ -0.59
MACF1Q9UPN3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.59
MACF1Q9UPN3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC11.4□□□□□ -0.59
MACF1Q9UPN3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
MACF1Q9UPN3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
MACF1Q9UPN3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
MACF1Q9UPN3 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC11.38□□□□□ -0.59
MACF1Q9UPN3 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC11.38□□□□□ -0.59
MACF1Q9UPN3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
MACF1Q9UPN3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC11.38□□□□□ -0.59
MACF1Q9UPN3 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC11.38□□□□□ -0.59
MACF1Q9UPN3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MACF1Q9UPN3 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC11.37□□□□□ -0.59
MACF1Q9UPN3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
MACF1Q9UPN3 U85056.1-201ENST00000616429 682 ntBASIC11.36□□□□□ -0.59
MACF1Q9UPN3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
MACF1Q9UPN3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
MACF1Q9UPN3 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
MACF1Q9UPN3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC11.35□□□□□ -0.59
MACF1Q9UPN3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC11.34□□□□□ -0.59
MACF1Q9UPN3 HYI-213ENST00000583037 1322 ntTSL 5 BASIC11.34□□□□□ -0.59
MACF1Q9UPN3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
MACF1Q9UPN3 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
MACF1Q9UPN3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC11.34□□□□□ -0.59
MACF1Q9UPN3 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC11.34□□□□□ -0.59
MACF1Q9UPN3 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC11.33□□□□□ -0.6
MACF1Q9UPN3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
MACF1Q9UPN3 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC11.33□□□□□ -0.6
MACF1Q9UPN3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
MACF1Q9UPN3 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC11.33□□□□□ -0.6
MACF1Q9UPN3 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
MACF1Q9UPN3 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
MACF1Q9UPN3 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC11.31□□□□□ -0.6
MACF1Q9UPN3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
MACF1Q9UPN3 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
MACF1Q9UPN3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
MACF1Q9UPN3 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC11.3□□□□□ -0.6
MACF1Q9UPN3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC11.3□□□□□ -0.6
MACF1Q9UPN3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MACF1Q9UPN3 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
MACF1Q9UPN3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
MACF1Q9UPN3 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC11.3□□□□□ -0.6
MACF1Q9UPN3 AC022413.1-201ENST00000624602 984 ntBASIC11.3□□□□□ -0.6
MACF1Q9UPN3 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC11.3□□□□□ -0.6
MACF1Q9UPN3 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
MACF1Q9UPN3 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MACF1Q9UPN3 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MACF1Q9UPN3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
MACF1Q9UPN3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
MACF1Q9UPN3 MIR638-201ENST00000385237 100 ntBASIC11.28□□□□□ -0.6
MACF1Q9UPN3 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
MACF1Q9UPN3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC11.28□□□□□ -0.6
MACF1Q9UPN3 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC11.28□□□□□ -0.6
MACF1Q9UPN3 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC11.28□□□□□ -0.6
MACF1Q9UPN3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC11.27□□□□□ -0.6
MACF1Q9UPN3 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
MACF1Q9UPN3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
MACF1Q9UPN3 CHML-204ENST00000638121 920 ntTSL 2 BASIC11.27□□□□□ -0.61
MACF1Q9UPN3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC11.26□□□□□ -0.61
MACF1Q9UPN3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC11.26□□□□□ -0.61
MACF1Q9UPN3 CCM2-218ENST00000541586 1719 ntTSL 3 BASIC11.26□□□□□ -0.61
MACF1Q9UPN3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MACF1Q9UPN3 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
MACF1Q9UPN3 AC009299.2-201ENST00000482477 511 ntBASIC11.26□□□□□ -0.61
MACF1Q9UPN3 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MACF1Q9UPN3 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
MACF1Q9UPN3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC11.26□□□□□ -0.61
MACF1Q9UPN3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms