Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
UBQLN1Q9UMX0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
UBQLN1Q9UMX0 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.46■■■□□ 2.15
UBQLN1Q9UMX0 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.46■■■□□ 2.15
UBQLN1Q9UMX0 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
UBQLN1Q9UMX0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.44■■■□□ 2.14
UBQLN1Q9UMX0 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC28.44■■■□□ 2.14
UBQLN1Q9UMX0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC28.44■■■□□ 2.14
UBQLN1Q9UMX0 AC010864.1-201ENST00000609407 1511 ntBASIC28.43■■■□□ 2.14
UBQLN1Q9UMX0 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC28.43■■■□□ 2.14
UBQLN1Q9UMX0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
UBQLN1Q9UMX0 AC021231.2-201ENST00000594613 730 ntBASIC28.42■■■□□ 2.14
UBQLN1Q9UMX0 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
UBQLN1Q9UMX0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
UBQLN1Q9UMX0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
UBQLN1Q9UMX0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
UBQLN1Q9UMX0 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
UBQLN1Q9UMX0 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
UBQLN1Q9UMX0 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
UBQLN1Q9UMX0 ZNRF2P2-203ENST00000454624 420 ntBASIC28.37■■■□□ 2.13
UBQLN1Q9UMX0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
UBQLN1Q9UMX0 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
UBQLN1Q9UMX0 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
UBQLN1Q9UMX0 AL135925.1-201ENST00000605920 1701 ntBASIC28.35■■■□□ 2.13
UBQLN1Q9UMX0 MIR7108-201ENST00000614319 87 ntBASIC28.34■■■□□ 2.13
UBQLN1Q9UMX0 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.33■■■□□ 2.13
UBQLN1Q9UMX0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC28.33■■■□□ 2.13
UBQLN1Q9UMX0 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
UBQLN1Q9UMX0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
UBQLN1Q9UMX0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.32■■■□□ 2.12
UBQLN1Q9UMX0 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
UBQLN1Q9UMX0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC28.31■■■□□ 2.12
UBQLN1Q9UMX0 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
UBQLN1Q9UMX0 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC28.3■■■□□ 2.12
UBQLN1Q9UMX0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
UBQLN1Q9UMX0 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.29■■■□□ 2.12
UBQLN1Q9UMX0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
UBQLN1Q9UMX0 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
UBQLN1Q9UMX0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
UBQLN1Q9UMX0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
UBQLN1Q9UMX0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC28.28■■■□□ 2.12
UBQLN1Q9UMX0 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC28.28■■■□□ 2.12
UBQLN1Q9UMX0 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
UBQLN1Q9UMX0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
UBQLN1Q9UMX0 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
UBQLN1Q9UMX0 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.27■■■□□ 2.12
UBQLN1Q9UMX0 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC28.27■■■□□ 2.12
UBQLN1Q9UMX0 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
UBQLN1Q9UMX0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
UBQLN1Q9UMX0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.25■■■□□ 2.11
UBQLN1Q9UMX0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
UBQLN1Q9UMX0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
UBQLN1Q9UMX0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
UBQLN1Q9UMX0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
UBQLN1Q9UMX0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.23■■■□□ 2.11
UBQLN1Q9UMX0 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
UBQLN1Q9UMX0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
UBQLN1Q9UMX0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC28.2■■■□□ 2.1
UBQLN1Q9UMX0 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
UBQLN1Q9UMX0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.19■■■□□ 2.1
UBQLN1Q9UMX0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
UBQLN1Q9UMX0 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
UBQLN1Q9UMX0 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
UBQLN1Q9UMX0 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
UBQLN1Q9UMX0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
UBQLN1Q9UMX0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
UBQLN1Q9UMX0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
UBQLN1Q9UMX0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC28.15■■■□□ 2.1
UBQLN1Q9UMX0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC28.15■■■□□ 2.1
UBQLN1Q9UMX0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
UBQLN1Q9UMX0 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC28.14■■■□□ 2.1
UBQLN1Q9UMX0 LINC01971-201ENST00000617888 1048 ntBASIC28.14■■■□□ 2.1
UBQLN1Q9UMX0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
UBQLN1Q9UMX0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.13■■■□□ 2.09
UBQLN1Q9UMX0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
UBQLN1Q9UMX0 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
UBQLN1Q9UMX0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.13■■■□□ 2.09
UBQLN1Q9UMX0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
UBQLN1Q9UMX0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.12■■■□□ 2.09
UBQLN1Q9UMX0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC28.12■■■□□ 2.09
UBQLN1Q9UMX0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
UBQLN1Q9UMX0 AC127502.1-201ENST00000399971 1502 ntBASIC28.1■■■□□ 2.09
UBQLN1Q9UMX0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
UBQLN1Q9UMX0 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.09■■■□□ 2.09
UBQLN1Q9UMX0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC28.09■■■□□ 2.09
UBQLN1Q9UMX0 ST7-AS1-201ENST00000456775 1889 ntBASIC28.09■■■□□ 2.09
UBQLN1Q9UMX0 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
UBQLN1Q9UMX0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
UBQLN1Q9UMX0 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC28.08■■■□□ 2.09
UBQLN1Q9UMX0 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.08■■■□□ 2.09
UBQLN1Q9UMX0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
UBQLN1Q9UMX0 LINC00273-201ENST00000539813 1452 ntBASIC28.08■■■□□ 2.09
UBQLN1Q9UMX0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms