Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
GAFA1Q96PS6 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GAFA1Q96PS6 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GAFA1Q96PS6 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC21.97■■□□□ 1.11
GAFA1Q96PS6 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
GAFA1Q96PS6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
GAFA1Q96PS6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.11
GAFA1Q96PS6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
GAFA1Q96PS6 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.95■■□□□ 1.1
GAFA1Q96PS6 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
GAFA1Q96PS6 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.95■■□□□ 1.1
GAFA1Q96PS6 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GAFA1Q96PS6 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
GAFA1Q96PS6 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
GAFA1Q96PS6 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.94■■□□□ 1.1
GAFA1Q96PS6 AC087741.3-201ENST00000624270 1347 ntBASIC21.94■■□□□ 1.1
GAFA1Q96PS6 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
GAFA1Q96PS6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
GAFA1Q96PS6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
GAFA1Q96PS6 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
GAFA1Q96PS6 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
GAFA1Q96PS6 RPS2P35-201ENST00000443417 897 ntBASIC21.9■■□□□ 1.1
GAFA1Q96PS6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
GAFA1Q96PS6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC21.89■■□□□ 1.09
GAFA1Q96PS6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
GAFA1Q96PS6 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
GAFA1Q96PS6 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GAFA1Q96PS6 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
GAFA1Q96PS6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
GAFA1Q96PS6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.86■■□□□ 1.09
GAFA1Q96PS6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
GAFA1Q96PS6 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.86■■□□□ 1.09
GAFA1Q96PS6 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.86■■□□□ 1.09
GAFA1Q96PS6 AC044849.2-201ENST00000606596 710 ntBASIC21.85■■□□□ 1.09
GAFA1Q96PS6 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.85■■□□□ 1.09
GAFA1Q96PS6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
GAFA1Q96PS6 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
GAFA1Q96PS6 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
GAFA1Q96PS6 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
GAFA1Q96PS6 AC108673.1-201ENST00000510422 1159 ntBASIC21.84■■□□□ 1.09
GAFA1Q96PS6 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
GAFA1Q96PS6 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
GAFA1Q96PS6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
GAFA1Q96PS6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
GAFA1Q96PS6 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
GAFA1Q96PS6 MIR6090-201ENST00000622481 60 ntBASIC21.82■■□□□ 1.08
GAFA1Q96PS6 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.82■■□□□ 1.08
GAFA1Q96PS6 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GAFA1Q96PS6 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.82■■□□□ 1.08
GAFA1Q96PS6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
GAFA1Q96PS6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
GAFA1Q96PS6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
GAFA1Q96PS6 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GAFA1Q96PS6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GAFA1Q96PS6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
GAFA1Q96PS6 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.8■■□□□ 1.08
GAFA1Q96PS6 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
GAFA1Q96PS6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
GAFA1Q96PS6 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GAFA1Q96PS6 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
GAFA1Q96PS6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GAFA1Q96PS6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
GAFA1Q96PS6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.79■■□□□ 1.08
GAFA1Q96PS6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
GAFA1Q96PS6 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GAFA1Q96PS6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GAFA1Q96PS6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GAFA1Q96PS6 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GAFA1Q96PS6 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
GAFA1Q96PS6 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
GAFA1Q96PS6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
GAFA1Q96PS6 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
GAFA1Q96PS6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
GAFA1Q96PS6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.76■■□□□ 1.07
GAFA1Q96PS6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
GAFA1Q96PS6 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
GAFA1Q96PS6 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
GAFA1Q96PS6 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
GAFA1Q96PS6 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GAFA1Q96PS6 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.74■■□□□ 1.07
GAFA1Q96PS6 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.74■■□□□ 1.07
GAFA1Q96PS6 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
GAFA1Q96PS6 AC127502.1-201ENST00000399971 1502 ntBASIC21.74■■□□□ 1.07
GAFA1Q96PS6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
GAFA1Q96PS6 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
GAFA1Q96PS6 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.73■■□□□ 1.07
GAFA1Q96PS6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
GAFA1Q96PS6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
GAFA1Q96PS6 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.72■■□□□ 1.07
GAFA1Q96PS6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
GAFA1Q96PS6 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC21.71■■□□□ 1.07
GAFA1Q96PS6 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.71■■□□□ 1.07
GAFA1Q96PS6 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
GAFA1Q96PS6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
GAFA1Q96PS6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
GAFA1Q96PS6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.7■■□□□ 1.06
GAFA1Q96PS6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
GAFA1Q96PS6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
GAFA1Q96PS6 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
GAFA1Q96PS6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms