Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SPG11Q96JI7 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
SPG11Q96JI7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
SPG11Q96JI7 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.79■■□□□ 1.24
SPG11Q96JI7 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
SPG11Q96JI7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
SPG11Q96JI7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
SPG11Q96JI7 RNF126P1-201ENST00000567452 1320 ntBASIC22.76■■□□□ 1.23
SPG11Q96JI7 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.76■■□□□ 1.23
SPG11Q96JI7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
SPG11Q96JI7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
SPG11Q96JI7 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.74■■□□□ 1.23
SPG11Q96JI7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
SPG11Q96JI7 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.73■■□□□ 1.23
SPG11Q96JI7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC22.72■■□□□ 1.23
SPG11Q96JI7 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC22.71■■□□□ 1.23
SPG11Q96JI7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.71■■□□□ 1.23
SPG11Q96JI7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC22.71■■□□□ 1.23
SPG11Q96JI7 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
SPG11Q96JI7 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
SPG11Q96JI7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC22.7■■□□□ 1.22
SPG11Q96JI7 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC22.69■■□□□ 1.22
SPG11Q96JI7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
SPG11Q96JI7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
SPG11Q96JI7 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
SPG11Q96JI7 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.67■■□□□ 1.22
SPG11Q96JI7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SPG11Q96JI7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SPG11Q96JI7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
SPG11Q96JI7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.66■■□□□ 1.22
SPG11Q96JI7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
SPG11Q96JI7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC22.66■■□□□ 1.22
SPG11Q96JI7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
SPG11Q96JI7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.64■■□□□ 1.22
SPG11Q96JI7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SPG11Q96JI7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.63■■□□□ 1.21
SPG11Q96JI7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.63■■□□□ 1.21
SPG11Q96JI7 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SPG11Q96JI7 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.63■■□□□ 1.21
SPG11Q96JI7 GPX1-201ENST00000419349 1106 ntBASIC22.62■■□□□ 1.21
SPG11Q96JI7 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.61■■□□□ 1.21
SPG11Q96JI7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
SPG11Q96JI7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
SPG11Q96JI7 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SPG11Q96JI7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SPG11Q96JI7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.59■■□□□ 1.21
SPG11Q96JI7 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC22.59■■□□□ 1.21
SPG11Q96JI7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
SPG11Q96JI7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.58■■□□□ 1.2
SPG11Q96JI7 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
SPG11Q96JI7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.58■■□□□ 1.2
SPG11Q96JI7 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.57■■□□□ 1.2
SPG11Q96JI7 NTF6A-201ENST00000591175 560 ntBASIC22.57■■□□□ 1.2
SPG11Q96JI7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.56■■□□□ 1.2
SPG11Q96JI7 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SPG11Q96JI7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.56■■□□□ 1.2
SPG11Q96JI7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SPG11Q96JI7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
SPG11Q96JI7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SPG11Q96JI7 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.54■■□□□ 1.2
SPG11Q96JI7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SPG11Q96JI7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
SPG11Q96JI7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC22.53■■□□□ 1.2
SPG11Q96JI7 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SPG11Q96JI7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.52■■□□□ 1.2
SPG11Q96JI7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SPG11Q96JI7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.52■■□□□ 1.2
SPG11Q96JI7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SPG11Q96JI7 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SPG11Q96JI7 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SPG11Q96JI7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.49■■□□□ 1.19
SPG11Q96JI7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SPG11Q96JI7 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.49■■□□□ 1.19
SPG11Q96JI7 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SPG11Q96JI7 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SPG11Q96JI7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.48■■□□□ 1.19
SPG11Q96JI7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC22.48■■□□□ 1.19
SPG11Q96JI7 AC012354.3-201ENST00000623734 483 ntBASIC22.48■■□□□ 1.19
SPG11Q96JI7 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SPG11Q96JI7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SPG11Q96JI7 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
SPG11Q96JI7 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPG11Q96JI7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC22.46■■□□□ 1.19
SPG11Q96JI7 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
SPG11Q96JI7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
SPG11Q96JI7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
SPG11Q96JI7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
SPG11Q96JI7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 59.2 ms