Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3L1Q8WWY6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
MBD3L1Q8WWY6 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MBD3L1Q8WWY6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
MBD3L1Q8WWY6 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
MBD3L1Q8WWY6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC20.71■□□□□ 0.91
MBD3L1Q8WWY6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3L1Q8WWY6 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
MBD3L1Q8WWY6 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3L1Q8WWY6 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC20.7■□□□□ 0.9
MBD3L1Q8WWY6 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
MBD3L1Q8WWY6 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC20.7■□□□□ 0.9
MBD3L1Q8WWY6 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
MBD3L1Q8WWY6 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.7■□□□□ 0.9
MBD3L1Q8WWY6 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3L1Q8WWY6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
MBD3L1Q8WWY6 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
MBD3L1Q8WWY6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
MBD3L1Q8WWY6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3L1Q8WWY6 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
MBD3L1Q8WWY6 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.66■□□□□ 0.9
MBD3L1Q8WWY6 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
MBD3L1Q8WWY6 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
MBD3L1Q8WWY6 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
MBD3L1Q8WWY6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MBD3L1Q8WWY6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3L1Q8WWY6 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MBD3L1Q8WWY6 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.62■□□□□ 0.89
MBD3L1Q8WWY6 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MBD3L1Q8WWY6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MBD3L1Q8WWY6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MBD3L1Q8WWY6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
MBD3L1Q8WWY6 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MBD3L1Q8WWY6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MBD3L1Q8WWY6 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MBD3L1Q8WWY6 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MBD3L1Q8WWY6 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
MBD3L1Q8WWY6 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
MBD3L1Q8WWY6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MBD3L1Q8WWY6 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MBD3L1Q8WWY6 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MBD3L1Q8WWY6 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.59■□□□□ 0.89
MBD3L1Q8WWY6 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.59■□□□□ 0.89
MBD3L1Q8WWY6 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MBD3L1Q8WWY6 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3L1Q8WWY6 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
MBD3L1Q8WWY6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.56■□□□□ 0.88
MBD3L1Q8WWY6 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
MBD3L1Q8WWY6 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
MBD3L1Q8WWY6 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
MBD3L1Q8WWY6 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3L1Q8WWY6 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3L1Q8WWY6 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3L1Q8WWY6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3L1Q8WWY6 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3L1Q8WWY6 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MBD3L1Q8WWY6 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
MBD3L1Q8WWY6 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
MBD3L1Q8WWY6 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
MBD3L1Q8WWY6 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
MBD3L1Q8WWY6 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
MBD3L1Q8WWY6 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MBD3L1Q8WWY6 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.53■□□□□ 0.88
MBD3L1Q8WWY6 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MBD3L1Q8WWY6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.52■□□□□ 0.88
MBD3L1Q8WWY6 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.51■□□□□ 0.87
MBD3L1Q8WWY6 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MBD3L1Q8WWY6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MBD3L1Q8WWY6 BX255925.1-201ENST00000566954 1854 ntBASIC20.5■□□□□ 0.87
MBD3L1Q8WWY6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MBD3L1Q8WWY6 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.5■□□□□ 0.87
MBD3L1Q8WWY6 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.5■□□□□ 0.87
MBD3L1Q8WWY6 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MBD3L1Q8WWY6 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MBD3L1Q8WWY6 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
MBD3L1Q8WWY6 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
MBD3L1Q8WWY6 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.47■□□□□ 0.87
MBD3L1Q8WWY6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.47■□□□□ 0.87
MBD3L1Q8WWY6 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
MBD3L1Q8WWY6 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
MBD3L1Q8WWY6 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MBD3L1Q8WWY6 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MBD3L1Q8WWY6 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MBD3L1Q8WWY6 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.44■□□□□ 0.86
MBD3L1Q8WWY6 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3L1Q8WWY6 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3L1Q8WWY6 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3L1Q8WWY6 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.44■□□□□ 0.86
MBD3L1Q8WWY6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3L1Q8WWY6 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MBD3L1Q8WWY6 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MBD3L1Q8WWY6 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MBD3L1Q8WWY6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.43■□□□□ 0.86
MBD3L1Q8WWY6 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MBD3L1Q8WWY6 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.43■□□□□ 0.86
MBD3L1Q8WWY6 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
MBD3L1Q8WWY6 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MBD3L1Q8WWY6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MBD3L1Q8WWY6 AL449106.1-201ENST00000608517 1980 ntBASIC20.42■□□□□ 0.86
MBD3L1Q8WWY6 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms