Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
PTCD2Q8WV60 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
PTCD2Q8WV60 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC26.61■■□□□ 1.85
PTCD2Q8WV60 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
PTCD2Q8WV60 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
PTCD2Q8WV60 AC005559.1-201ENST00000589661 871 ntBASIC26.6■■□□□ 1.85
PTCD2Q8WV60 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
PTCD2Q8WV60 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PTCD2Q8WV60 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
PTCD2Q8WV60 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.59■■□□□ 1.85
PTCD2Q8WV60 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PTCD2Q8WV60 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
PTCD2Q8WV60 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
PTCD2Q8WV60 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
PTCD2Q8WV60 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
PTCD2Q8WV60 MIR3665-201ENST00000578708 105 ntBASIC26.58■■□□□ 1.85
PTCD2Q8WV60 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PTCD2Q8WV60 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PTCD2Q8WV60 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
PTCD2Q8WV60 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
PTCD2Q8WV60 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PTCD2Q8WV60 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
PTCD2Q8WV60 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PTCD2Q8WV60 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PTCD2Q8WV60 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
PTCD2Q8WV60 AC087741.3-201ENST00000624270 1347 ntBASIC26.55■■□□□ 1.84
PTCD2Q8WV60 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
PTCD2Q8WV60 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
PTCD2Q8WV60 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
PTCD2Q8WV60 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC26.54■■□□□ 1.84
PTCD2Q8WV60 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
PTCD2Q8WV60 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
PTCD2Q8WV60 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
PTCD2Q8WV60 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
PTCD2Q8WV60 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
PTCD2Q8WV60 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.52■■□□□ 1.84
PTCD2Q8WV60 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC26.51■■□□□ 1.83
PTCD2Q8WV60 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
PTCD2Q8WV60 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTCD2Q8WV60 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PTCD2Q8WV60 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
PTCD2Q8WV60 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
PTCD2Q8WV60 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC26.5■■□□□ 1.83
PTCD2Q8WV60 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
PTCD2Q8WV60 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PTCD2Q8WV60 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
PTCD2Q8WV60 AC010864.1-201ENST00000609407 1511 ntBASIC26.49■■□□□ 1.83
PTCD2Q8WV60 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTCD2Q8WV60 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
PTCD2Q8WV60 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PTCD2Q8WV60 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC26.47■■□□□ 1.83
PTCD2Q8WV60 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC26.47■■□□□ 1.83
PTCD2Q8WV60 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
PTCD2Q8WV60 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PTCD2Q8WV60 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
PTCD2Q8WV60 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.46■■□□□ 1.83
PTCD2Q8WV60 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
PTCD2Q8WV60 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
PTCD2Q8WV60 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
PTCD2Q8WV60 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
PTCD2Q8WV60 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.41■■□□□ 1.82
PTCD2Q8WV60 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.41■■□□□ 1.82
PTCD2Q8WV60 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.41■■□□□ 1.82
PTCD2Q8WV60 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PTCD2Q8WV60 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.41■■□□□ 1.82
PTCD2Q8WV60 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PTCD2Q8WV60 AC139426.1-201ENST00000568218 2529 ntBASIC26.4■■□□□ 1.82
PTCD2Q8WV60 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
PTCD2Q8WV60 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.4■■□□□ 1.82
PTCD2Q8WV60 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
PTCD2Q8WV60 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
PTCD2Q8WV60 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PTCD2Q8WV60 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
PTCD2Q8WV60 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PTCD2Q8WV60 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
PTCD2Q8WV60 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.37■■□□□ 1.81
PTCD2Q8WV60 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
PTCD2Q8WV60 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.36■■□□□ 1.81
PTCD2Q8WV60 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
PTCD2Q8WV60 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PTCD2Q8WV60 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PTCD2Q8WV60 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PTCD2Q8WV60 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.35■■□□□ 1.81
PTCD2Q8WV60 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
PTCD2Q8WV60 RPS2-209ENST00000529806 993 ntTSL 3 BASIC26.35■■□□□ 1.81
PTCD2Q8WV60 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
PTCD2Q8WV60 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
PTCD2Q8WV60 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
PTCD2Q8WV60 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
PTCD2Q8WV60 AC044849.2-201ENST00000606596 710 ntBASIC26.33■■□□□ 1.81
PTCD2Q8WV60 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PTCD2Q8WV60 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PTCD2Q8WV60 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC26.32■■□□□ 1.8
PTCD2Q8WV60 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
PTCD2Q8WV60 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PTCD2Q8WV60 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
PTCD2Q8WV60 AL139393.2-201ENST00000608721 2025 ntBASIC26.31■■□□□ 1.8
PTCD2Q8WV60 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
PTCD2Q8WV60 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
PTCD2Q8WV60 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC26.31■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms