Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 DUX4L23-201ENST00000615195 1269 ntBASIC30.26■■■□□ 2.43
U2AF1L4Q8WU68 DUX4L24-201ENST00000617576 1269 ntBASIC30.26■■■□□ 2.43
U2AF1L4Q8WU68 DUX4L22-201ENST00000618238 1269 ntBASIC30.26■■■□□ 2.43
U2AF1L4Q8WU68 DUX4L20-201ENST00000619712 1269 ntBASIC30.26■■■□□ 2.43
U2AF1L4Q8WU68 DUX4L21-201ENST00000622058 1269 ntBASIC30.26■■■□□ 2.43
U2AF1L4Q8WU68 DUX4L10-201ENST00000622460 1267 ntBASIC30.26■■■□□ 2.43
U2AF1L4Q8WU68 DUX4L25-201ENST00000624915 1269 ntBASIC30.26■■■□□ 2.43
U2AF1L4Q8WU68 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
U2AF1L4Q8WU68 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
U2AF1L4Q8WU68 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC30.24■■■□□ 2.43
U2AF1L4Q8WU68 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC30.24■■■□□ 2.43
U2AF1L4Q8WU68 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
U2AF1L4Q8WU68 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.23■■■□□ 2.43
U2AF1L4Q8WU68 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
U2AF1L4Q8WU68 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
U2AF1L4Q8WU68 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC30.22■■■□□ 2.43
U2AF1L4Q8WU68 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
U2AF1L4Q8WU68 HES6-205ENST00000409356 528 ntTSL 2 BASIC30.21■■■□□ 2.43
U2AF1L4Q8WU68 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC30.21■■■□□ 2.43
U2AF1L4Q8WU68 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC30.21■■■□□ 2.43
U2AF1L4Q8WU68 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.21■■■□□ 2.43
U2AF1L4Q8WU68 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
U2AF1L4Q8WU68 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
U2AF1L4Q8WU68 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.2■■■□□ 2.43
U2AF1L4Q8WU68 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
U2AF1L4Q8WU68 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.18■■■□□ 2.42
U2AF1L4Q8WU68 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
U2AF1L4Q8WU68 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
U2AF1L4Q8WU68 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
U2AF1L4Q8WU68 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
U2AF1L4Q8WU68 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
U2AF1L4Q8WU68 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.16■■■□□ 2.42
U2AF1L4Q8WU68 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.16■■■□□ 2.42
U2AF1L4Q8WU68 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
U2AF1L4Q8WU68 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
U2AF1L4Q8WU68 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.15■■■□□ 2.42
U2AF1L4Q8WU68 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
U2AF1L4Q8WU68 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
U2AF1L4Q8WU68 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
U2AF1L4Q8WU68 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
U2AF1L4Q8WU68 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
U2AF1L4Q8WU68 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
U2AF1L4Q8WU68 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
U2AF1L4Q8WU68 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
U2AF1L4Q8WU68 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
U2AF1L4Q8WU68 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
U2AF1L4Q8WU68 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
U2AF1L4Q8WU68 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
U2AF1L4Q8WU68 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.11■■■□□ 2.41
U2AF1L4Q8WU68 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.11■■■□□ 2.41
U2AF1L4Q8WU68 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC30.11■■■□□ 2.41
U2AF1L4Q8WU68 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
U2AF1L4Q8WU68 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC30.1■■■□□ 2.41
U2AF1L4Q8WU68 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
U2AF1L4Q8WU68 GPX1-201ENST00000419349 1106 ntBASIC30.08■■■□□ 2.41
U2AF1L4Q8WU68 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
U2AF1L4Q8WU68 CHML-204ENST00000638121 920 ntTSL 2 BASIC30.07■■■□□ 2.4
U2AF1L4Q8WU68 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
U2AF1L4Q8WU68 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
U2AF1L4Q8WU68 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
U2AF1L4Q8WU68 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
U2AF1L4Q8WU68 RNF126P1-201ENST00000567452 1320 ntBASIC30.04■■■□□ 2.4
U2AF1L4Q8WU68 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
U2AF1L4Q8WU68 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
U2AF1L4Q8WU68 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
U2AF1L4Q8WU68 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
U2AF1L4Q8WU68 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.02■■■□□ 2.4
U2AF1L4Q8WU68 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
U2AF1L4Q8WU68 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
U2AF1L4Q8WU68 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC30.01■■■□□ 2.4
U2AF1L4Q8WU68 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC30.01■■■□□ 2.39
U2AF1L4Q8WU68 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC30.01■■■□□ 2.39
U2AF1L4Q8WU68 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC30.01■■■□□ 2.39
U2AF1L4Q8WU68 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC30■■■□□ 2.39
U2AF1L4Q8WU68 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30■■■□□ 2.39
U2AF1L4Q8WU68 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC29.99■■■□□ 2.39
U2AF1L4Q8WU68 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
U2AF1L4Q8WU68 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
U2AF1L4Q8WU68 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.98■■■□□ 2.39
U2AF1L4Q8WU68 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
U2AF1L4Q8WU68 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
U2AF1L4Q8WU68 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.96■■■□□ 2.39
U2AF1L4Q8WU68 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
U2AF1L4Q8WU68 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
U2AF1L4Q8WU68 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
U2AF1L4Q8WU68 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
U2AF1L4Q8WU68 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
U2AF1L4Q8WU68 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC29.95■■■□□ 2.39
U2AF1L4Q8WU68 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC29.95■■■□□ 2.38
U2AF1L4Q8WU68 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC29.94■■■□□ 2.38
U2AF1L4Q8WU68 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.93■■■□□ 2.38
U2AF1L4Q8WU68 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.93■■■□□ 2.38
U2AF1L4Q8WU68 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC29.93■■■□□ 2.38
U2AF1L4Q8WU68 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
U2AF1L4Q8WU68 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
U2AF1L4Q8WU68 AC012354.3-201ENST00000623734 483 ntBASIC29.91■■■□□ 2.38
U2AF1L4Q8WU68 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC29.91■■■□□ 2.38
U2AF1L4Q8WU68 ST7-202ENST00000323984 2142 ntTSL 5 BASIC29.9■■■□□ 2.38
U2AF1L4Q8WU68 ST7-207ENST00000393449 2127 ntTSL 5 BASIC29.9■■■□□ 2.38
U2AF1L4Q8WU68 EI24-212ENST00000615917 1407 ntTSL 2 BASIC29.9■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms