Protein–RNA interactions for Protein: Q8N1G2

CMTR1, Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1, humanhuman

Known RBP Predictions only

Length 835 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTR1Q8N1G2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC30.71■■■□□ 2.51
CMTR1Q8N1G2 AC010864.1-201ENST00000609407 1511 ntBASIC30.69■■■□□ 2.5
CMTR1Q8N1G2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CMTR1Q8N1G2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CMTR1Q8N1G2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
CMTR1Q8N1G2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CMTR1Q8N1G2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
CMTR1Q8N1G2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.68■■■□□ 2.5
CMTR1Q8N1G2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.68■■■□□ 2.5
CMTR1Q8N1G2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
CMTR1Q8N1G2 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CMTR1Q8N1G2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CMTR1Q8N1G2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.65■■■□□ 2.5
CMTR1Q8N1G2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CMTR1Q8N1G2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
CMTR1Q8N1G2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
CMTR1Q8N1G2 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.63■■■□□ 2.49
CMTR1Q8N1G2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
CMTR1Q8N1G2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.63■■■□□ 2.49
CMTR1Q8N1G2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CMTR1Q8N1G2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CMTR1Q8N1G2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.61■■■□□ 2.49
CMTR1Q8N1G2 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CMTR1Q8N1G2 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC30.59■■■□□ 2.49
CMTR1Q8N1G2 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
CMTR1Q8N1G2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.58■■■□□ 2.49
CMTR1Q8N1G2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CMTR1Q8N1G2 MIR6090-201ENST00000622481 60 ntBASIC30.58■■■□□ 2.49
CMTR1Q8N1G2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.58■■■□□ 2.49
CMTR1Q8N1G2 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC30.58■■■□□ 2.49
CMTR1Q8N1G2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.58■■■□□ 2.49
CMTR1Q8N1G2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CMTR1Q8N1G2 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.56■■■□□ 2.48
CMTR1Q8N1G2 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CMTR1Q8N1G2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CMTR1Q8N1G2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC30.55■■■□□ 2.48
CMTR1Q8N1G2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.55■■■□□ 2.48
CMTR1Q8N1G2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CMTR1Q8N1G2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.53■■■□□ 2.48
CMTR1Q8N1G2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CMTR1Q8N1G2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.53■■■□□ 2.48
CMTR1Q8N1G2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CMTR1Q8N1G2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CMTR1Q8N1G2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
CMTR1Q8N1G2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.52■■■□□ 2.48
CMTR1Q8N1G2 AC044849.2-201ENST00000606596 710 ntBASIC30.52■■■□□ 2.48
CMTR1Q8N1G2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CMTR1Q8N1G2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CMTR1Q8N1G2 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CMTR1Q8N1G2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.51■■■□□ 2.48
CMTR1Q8N1G2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
CMTR1Q8N1G2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.51■■■□□ 2.47
CMTR1Q8N1G2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CMTR1Q8N1G2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.49■■■□□ 2.47
CMTR1Q8N1G2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CMTR1Q8N1G2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.49■■■□□ 2.47
CMTR1Q8N1G2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CMTR1Q8N1G2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CMTR1Q8N1G2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CMTR1Q8N1G2 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CMTR1Q8N1G2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.47■■■□□ 2.47
CMTR1Q8N1G2 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
CMTR1Q8N1G2 AC108673.1-201ENST00000510422 1159 ntBASIC30.46■■■□□ 2.47
CMTR1Q8N1G2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.47
CMTR1Q8N1G2 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC30.45■■■□□ 2.46
CMTR1Q8N1G2 AC139426.1-201ENST00000568218 2529 ntBASIC30.42■■■□□ 2.46
CMTR1Q8N1G2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CMTR1Q8N1G2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
CMTR1Q8N1G2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
CMTR1Q8N1G2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CMTR1Q8N1G2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.4■■■□□ 2.46
CMTR1Q8N1G2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CMTR1Q8N1G2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
CMTR1Q8N1G2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CMTR1Q8N1G2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.39■■■□□ 2.46
CMTR1Q8N1G2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
CMTR1Q8N1G2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CMTR1Q8N1G2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.38■■■□□ 2.45
CMTR1Q8N1G2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
CMTR1Q8N1G2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.37■■■□□ 2.45
CMTR1Q8N1G2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.36■■■□□ 2.45
CMTR1Q8N1G2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.36■■■□□ 2.45
CMTR1Q8N1G2 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.35■■■□□ 2.45
CMTR1Q8N1G2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.35■■■□□ 2.45
CMTR1Q8N1G2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
CMTR1Q8N1G2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CMTR1Q8N1G2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CMTR1Q8N1G2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
CMTR1Q8N1G2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.34■■■□□ 2.45
CMTR1Q8N1G2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.34■■■□□ 2.45
CMTR1Q8N1G2 AC127502.1-201ENST00000399971 1502 ntBASIC30.34■■■□□ 2.45
CMTR1Q8N1G2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CMTR1Q8N1G2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CMTR1Q8N1G2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.33■■■□□ 2.45
CMTR1Q8N1G2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
CMTR1Q8N1G2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
CMTR1Q8N1G2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.31■■■□□ 2.44
CMTR1Q8N1G2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CMTR1Q8N1G2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.3■■■□□ 2.44
CMTR1Q8N1G2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms