Protein–RNA interactions for Protein: Q8IXZ2

ZC3H3, Zinc finger CCCH domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H3Q8IXZ2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.85■■■□□ 2.21
ZC3H3Q8IXZ2 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
ZC3H3Q8IXZ2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
ZC3H3Q8IXZ2 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
ZC3H3Q8IXZ2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.84■■■□□ 2.21
ZC3H3Q8IXZ2 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC28.84■■■□□ 2.21
ZC3H3Q8IXZ2 AC139426.1-201ENST00000568218 2529 ntBASIC28.83■■■□□ 2.21
ZC3H3Q8IXZ2 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
ZC3H3Q8IXZ2 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC28.82■■■□□ 2.2
ZC3H3Q8IXZ2 SUZ12P1-203ENST00000578195 985 ntBASIC28.82■■■□□ 2.2
ZC3H3Q8IXZ2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
ZC3H3Q8IXZ2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
ZC3H3Q8IXZ2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC28.81■■■□□ 2.2
ZC3H3Q8IXZ2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
ZC3H3Q8IXZ2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.79■■■□□ 2.2
ZC3H3Q8IXZ2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.79■■■□□ 2.2
ZC3H3Q8IXZ2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
ZC3H3Q8IXZ2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
ZC3H3Q8IXZ2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
ZC3H3Q8IXZ2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC28.78■■■□□ 2.2
ZC3H3Q8IXZ2 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
ZC3H3Q8IXZ2 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
ZC3H3Q8IXZ2 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ZC3H3Q8IXZ2 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ZC3H3Q8IXZ2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
ZC3H3Q8IXZ2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
ZC3H3Q8IXZ2 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
ZC3H3Q8IXZ2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
ZC3H3Q8IXZ2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ZC3H3Q8IXZ2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ZC3H3Q8IXZ2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ZC3H3Q8IXZ2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC28.73■■■□□ 2.19
ZC3H3Q8IXZ2 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ZC3H3Q8IXZ2 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ZC3H3Q8IXZ2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ZC3H3Q8IXZ2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZC3H3Q8IXZ2 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ZC3H3Q8IXZ2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC28.71■■■□□ 2.19
ZC3H3Q8IXZ2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
ZC3H3Q8IXZ2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.71■■■□□ 2.19
ZC3H3Q8IXZ2 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.19
ZC3H3Q8IXZ2 MIR762-201ENST00000390236 83 ntBASIC28.7■■■□□ 2.18
ZC3H3Q8IXZ2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.69■■■□□ 2.18
ZC3H3Q8IXZ2 AL139393.2-201ENST00000608721 2025 ntBASIC28.69■■■□□ 2.18
ZC3H3Q8IXZ2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC28.69■■■□□ 2.18
ZC3H3Q8IXZ2 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC28.69■■■□□ 2.18
ZC3H3Q8IXZ2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ZC3H3Q8IXZ2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC28.68■■■□□ 2.18
ZC3H3Q8IXZ2 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC28.68■■■□□ 2.18
ZC3H3Q8IXZ2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
ZC3H3Q8IXZ2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC28.66■■■□□ 2.18
ZC3H3Q8IXZ2 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
ZC3H3Q8IXZ2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
ZC3H3Q8IXZ2 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.65■■■□□ 2.18
ZC3H3Q8IXZ2 CHML-205ENST00000638160 705 ntTSL 3 BASIC28.65■■■□□ 2.18
ZC3H3Q8IXZ2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
ZC3H3Q8IXZ2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
ZC3H3Q8IXZ2 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
ZC3H3Q8IXZ2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
ZC3H3Q8IXZ2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.64■■■□□ 2.18
ZC3H3Q8IXZ2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
ZC3H3Q8IXZ2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.62■■■□□ 2.17
ZC3H3Q8IXZ2 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
ZC3H3Q8IXZ2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC28.6■■■□□ 2.17
ZC3H3Q8IXZ2 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC28.6■■■□□ 2.17
ZC3H3Q8IXZ2 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC28.6■■■□□ 2.17
ZC3H3Q8IXZ2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC28.6■■■□□ 2.17
ZC3H3Q8IXZ2 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
ZC3H3Q8IXZ2 HNRNPLP2-201ENST00000568980 1570 ntBASIC28.58■■■□□ 2.17
ZC3H3Q8IXZ2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
ZC3H3Q8IXZ2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ZC3H3Q8IXZ2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ZC3H3Q8IXZ2 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
ZC3H3Q8IXZ2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
ZC3H3Q8IXZ2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
ZC3H3Q8IXZ2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
ZC3H3Q8IXZ2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.55■■■□□ 2.16
ZC3H3Q8IXZ2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
ZC3H3Q8IXZ2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
ZC3H3Q8IXZ2 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
ZC3H3Q8IXZ2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.52■■■□□ 2.16
ZC3H3Q8IXZ2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC28.51■■■□□ 2.15
ZC3H3Q8IXZ2 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
ZC3H3Q8IXZ2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.5■■■□□ 2.15
ZC3H3Q8IXZ2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
ZC3H3Q8IXZ2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC28.5■■■□□ 2.15
ZC3H3Q8IXZ2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
ZC3H3Q8IXZ2 AC127502.1-201ENST00000399971 1502 ntBASIC28.49■■■□□ 2.15
ZC3H3Q8IXZ2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.49■■■□□ 2.15
ZC3H3Q8IXZ2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ZC3H3Q8IXZ2 AC005559.1-201ENST00000589661 871 ntBASIC28.49■■■□□ 2.15
ZC3H3Q8IXZ2 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
ZC3H3Q8IXZ2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
ZC3H3Q8IXZ2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
ZC3H3Q8IXZ2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
ZC3H3Q8IXZ2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.47■■■□□ 2.15
ZC3H3Q8IXZ2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
ZC3H3Q8IXZ2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC28.46■■■□□ 2.15
ZC3H3Q8IXZ2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC28.45■■■□□ 2.15
ZC3H3Q8IXZ2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC28.45■■■□□ 2.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms