Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC31.69■■■□□ 2.66
CACNB3P54284 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.69■■■□□ 2.66
CACNB3P54284 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.68■■■□□ 2.66
CACNB3P54284 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CACNB3P54284 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CACNB3P54284 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CACNB3P54284 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
CACNB3P54284 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
CACNB3P54284 AL161658.1-201ENST00000623641 1967 ntBASIC31.66■■■□□ 2.66
CACNB3P54284 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.65■■■□□ 2.66
CACNB3P54284 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.65■■■□□ 2.66
CACNB3P54284 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
CACNB3P54284 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.64■■■□□ 2.66
CACNB3P54284 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.64■■■□□ 2.66
CACNB3P54284 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CACNB3P54284 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
CACNB3P54284 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.63■■■□□ 2.65
CACNB3P54284 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CACNB3P54284 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CACNB3P54284 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.62■■■□□ 2.65
CACNB3P54284 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CACNB3P54284 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC31.62■■■□□ 2.65
CACNB3P54284 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
CACNB3P54284 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
CACNB3P54284 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
CACNB3P54284 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
CACNB3P54284 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.59■■■□□ 2.65
CACNB3P54284 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.58■■■□□ 2.65
CACNB3P54284 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
CACNB3P54284 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.58■■■□□ 2.65
CACNB3P54284 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
CACNB3P54284 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CACNB3P54284 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CACNB3P54284 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.55■■■□□ 2.64
CACNB3P54284 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.55■■■□□ 2.64
CACNB3P54284 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
CACNB3P54284 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
CACNB3P54284 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.54■■■□□ 2.64
CACNB3P54284 HSD17B1P1-201ENST00000590052 955 ntBASIC31.54■■■□□ 2.64
CACNB3P54284 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.54■■■□□ 2.64
CACNB3P54284 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
CACNB3P54284 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC31.53■■■□□ 2.64
CACNB3P54284 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC31.52■■■□□ 2.64
CACNB3P54284 DUX4L13-201ENST00000554103 1267 ntBASIC31.52■■■□□ 2.64
CACNB3P54284 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.52■■■□□ 2.64
CACNB3P54284 DUX4L15-201ENST00000611059 1267 ntBASIC31.52■■■□□ 2.64
CACNB3P54284 DUX4L23-201ENST00000615195 1269 ntBASIC31.52■■■□□ 2.64
CACNB3P54284 DUX4L24-201ENST00000617576 1269 ntBASIC31.52■■■□□ 2.64
CACNB3P54284 DUX4L22-201ENST00000618238 1269 ntBASIC31.52■■■□□ 2.64
CACNB3P54284 DUX4L20-201ENST00000619712 1269 ntBASIC31.52■■■□□ 2.64
CACNB3P54284 DUX4L21-201ENST00000622058 1269 ntBASIC31.52■■■□□ 2.64
CACNB3P54284 DUX4L10-201ENST00000622460 1267 ntBASIC31.52■■■□□ 2.64
CACNB3P54284 DUX4L25-201ENST00000624915 1269 ntBASIC31.52■■■□□ 2.64
CACNB3P54284 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
CACNB3P54284 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CACNB3P54284 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
CACNB3P54284 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.51■■■□□ 2.63
CACNB3P54284 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
CACNB3P54284 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CACNB3P54284 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
CACNB3P54284 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.49■■■□□ 2.63
CACNB3P54284 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
CACNB3P54284 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.47■■■□□ 2.63
CACNB3P54284 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
CACNB3P54284 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.47■■■□□ 2.63
CACNB3P54284 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.45■■■□□ 2.63
CACNB3P54284 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.45■■■□□ 2.63
CACNB3P54284 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.63
CACNB3P54284 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.44■■■□□ 2.62
CACNB3P54284 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.44■■■□□ 2.62
CACNB3P54284 ABHD17AP3-201ENST00000503096 1137 ntBASIC31.43■■■□□ 2.62
CACNB3P54284 BRD4-212ENST00000630599 726 ntTSL 2 BASIC31.43■■■□□ 2.62
CACNB3P54284 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC31.42■■■□□ 2.62
CACNB3P54284 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
CACNB3P54284 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.41■■■□□ 2.62
CACNB3P54284 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
CACNB3P54284 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
CACNB3P54284 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.39■■■□□ 2.62
CACNB3P54284 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
CACNB3P54284 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
CACNB3P54284 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC31.38■■■□□ 2.61
CACNB3P54284 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.37■■■□□ 2.61
CACNB3P54284 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.36■■■□□ 2.61
CACNB3P54284 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC31.36■■■□□ 2.61
CACNB3P54284 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
CACNB3P54284 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.36■■■□□ 2.61
CACNB3P54284 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.35■■■□□ 2.61
CACNB3P54284 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.35■■■□□ 2.61
CACNB3P54284 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.34■■■□□ 2.61
CACNB3P54284 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
CACNB3P54284 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.34■■■□□ 2.61
CACNB3P54284 AC010864.1-201ENST00000609407 1511 ntBASIC31.34■■■□□ 2.61
CACNB3P54284 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
CACNB3P54284 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.32■■■□□ 2.6
CACNB3P54284 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
CACNB3P54284 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.3■■■□□ 2.6
CACNB3P54284 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.3■■■□□ 2.6
CACNB3P54284 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
CACNB3P54284 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CACNB3P54284 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms