Protein–RNA interactions for Protein: P53804

TTC3, E3 ubiquitin-protein ligase TTC3, humanhuman

Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3P53804 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
TTC3P53804 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
TTC3P53804 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
TTC3P53804 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC28.83■■■□□ 2.21
TTC3P53804 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
TTC3P53804 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
TTC3P53804 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.81■■■□□ 2.2
TTC3P53804 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
TTC3P53804 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
TTC3P53804 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.81■■■□□ 2.2
TTC3P53804 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TTC3P53804 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
TTC3P53804 HSD17B1P1-201ENST00000590052 955 ntBASIC28.79■■■□□ 2.2
TTC3P53804 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
TTC3P53804 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.79■■■□□ 2.2
TTC3P53804 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.77■■■□□ 2.2
TTC3P53804 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
TTC3P53804 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
TTC3P53804 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC28.76■■■□□ 2.19
TTC3P53804 DUX4L13-201ENST00000554103 1267 ntBASIC28.74■■■□□ 2.19
TTC3P53804 DUX4L15-201ENST00000611059 1267 ntBASIC28.74■■■□□ 2.19
TTC3P53804 DUX4L23-201ENST00000615195 1269 ntBASIC28.74■■■□□ 2.19
TTC3P53804 DUX4L24-201ENST00000617576 1269 ntBASIC28.74■■■□□ 2.19
TTC3P53804 DUX4L22-201ENST00000618238 1269 ntBASIC28.74■■■□□ 2.19
TTC3P53804 DUX4L20-201ENST00000619712 1269 ntBASIC28.74■■■□□ 2.19
TTC3P53804 DUX4L21-201ENST00000622058 1269 ntBASIC28.74■■■□□ 2.19
TTC3P53804 DUX4L10-201ENST00000622460 1267 ntBASIC28.74■■■□□ 2.19
TTC3P53804 DUX4L25-201ENST00000624915 1269 ntBASIC28.74■■■□□ 2.19
TTC3P53804 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC28.74■■■□□ 2.19
TTC3P53804 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC28.74■■■□□ 2.19
TTC3P53804 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.72■■■□□ 2.19
TTC3P53804 EI24-212ENST00000615917 1407 ntTSL 2 BASIC28.71■■■□□ 2.19
TTC3P53804 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.7■■■□□ 2.18
TTC3P53804 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.7■■■□□ 2.18
TTC3P53804 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
TTC3P53804 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.69■■■□□ 2.18
TTC3P53804 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TTC3P53804 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.67■■■□□ 2.18
TTC3P53804 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
TTC3P53804 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.66■■■□□ 2.18
TTC3P53804 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.66■■■□□ 2.18
TTC3P53804 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
TTC3P53804 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.65■■■□□ 2.18
TTC3P53804 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.64■■■□□ 2.18
TTC3P53804 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.64■■■□□ 2.18
TTC3P53804 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TTC3P53804 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TTC3P53804 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
TTC3P53804 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.62■■■□□ 2.17
TTC3P53804 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.62■■■□□ 2.17
TTC3P53804 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC28.62■■■□□ 2.17
TTC3P53804 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
TTC3P53804 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TTC3P53804 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC28.61■■■□□ 2.17
TTC3P53804 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
TTC3P53804 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.6■■■□□ 2.17
TTC3P53804 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
TTC3P53804 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.6■■■□□ 2.17
TTC3P53804 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.59■■■□□ 2.17
TTC3P53804 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
TTC3P53804 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC28.58■■■□□ 2.17
TTC3P53804 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC3P53804 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TTC3P53804 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
TTC3P53804 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
TTC3P53804 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.58■■■□□ 2.17
TTC3P53804 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
TTC3P53804 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.56■■■□□ 2.16
TTC3P53804 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
TTC3P53804 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
TTC3P53804 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.55■■■□□ 2.16
TTC3P53804 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.55■■■□□ 2.16
TTC3P53804 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.54■■■□□ 2.16
TTC3P53804 LINC00273-201ENST00000539813 1452 ntBASIC28.54■■■□□ 2.16
TTC3P53804 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
TTC3P53804 AL161658.1-201ENST00000623641 1967 ntBASIC28.52■■■□□ 2.16
TTC3P53804 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.52■■■□□ 2.16
TTC3P53804 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.52■■■□□ 2.16
TTC3P53804 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC28.51■■■□□ 2.15
TTC3P53804 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.51■■■□□ 2.15
TTC3P53804 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.51■■■□□ 2.15
TTC3P53804 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TTC3P53804 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
TTC3P53804 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
TTC3P53804 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.49■■■□□ 2.15
TTC3P53804 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
TTC3P53804 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
TTC3P53804 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TTC3P53804 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.47■■■□□ 2.15
TTC3P53804 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
TTC3P53804 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
TTC3P53804 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
TTC3P53804 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.46■■■□□ 2.15
TTC3P53804 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
TTC3P53804 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.45■■■□□ 2.15
TTC3P53804 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
TTC3P53804 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
TTC3P53804 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.45■■■□□ 2.14
TTC3P53804 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.45■■■□□ 2.14
TTC3P53804 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC28.45■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms