Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC21.07■□□□□ 0.96
ATP6V0CP27449 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP6V0CP27449 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP6V0CP27449 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATP6V0CP27449 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC21.06■□□□□ 0.96
ATP6V0CP27449 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATP6V0CP27449 AL139393.2-201ENST00000608721 2025 ntBASIC21.05■□□□□ 0.96
ATP6V0CP27449 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.05■□□□□ 0.96
ATP6V0CP27449 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ATP6V0CP27449 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP6V0CP27449 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ATP6V0CP27449 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6V0CP27449 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ATP6V0CP27449 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0CP27449 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP6V0CP27449 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
ATP6V0CP27449 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
ATP6V0CP27449 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.02■□□□□ 0.95
ATP6V0CP27449 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
ATP6V0CP27449 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
ATP6V0CP27449 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0CP27449 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0CP27449 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP6V0CP27449 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
ATP6V0CP27449 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP6V0CP27449 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP6V0CP27449 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP6V0CP27449 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
ATP6V0CP27449 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP6V0CP27449 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP6V0CP27449 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
ATP6V0CP27449 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0CP27449 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0CP27449 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0CP27449 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0CP27449 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP6V0CP27449 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ATP6V0CP27449 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0CP27449 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ATP6V0CP27449 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0CP27449 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0CP27449 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ATP6V0CP27449 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
ATP6V0CP27449 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0CP27449 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ATP6V0CP27449 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.92■□□□□ 0.94
ATP6V0CP27449 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
ATP6V0CP27449 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
ATP6V0CP27449 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ATP6V0CP27449 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0CP27449 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
ATP6V0CP27449 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
ATP6V0CP27449 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V0CP27449 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V0CP27449 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
ATP6V0CP27449 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ATP6V0CP27449 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
ATP6V0CP27449 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ATP6V0CP27449 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ATP6V0CP27449 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
ATP6V0CP27449 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ATP6V0CP27449 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ATP6V0CP27449 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ATP6V0CP27449 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.87■□□□□ 0.93
ATP6V0CP27449 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0CP27449 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.86■□□□□ 0.93
ATP6V0CP27449 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ATP6V0CP27449 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0CP27449 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0CP27449 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0CP27449 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0CP27449 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0CP27449 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
ATP6V0CP27449 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
ATP6V0CP27449 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0CP27449 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.84■□□□□ 0.93
ATP6V0CP27449 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
ATP6V0CP27449 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0CP27449 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
ATP6V0CP27449 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.83■□□□□ 0.92
ATP6V0CP27449 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
ATP6V0CP27449 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0CP27449 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0CP27449 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.81■□□□□ 0.92
ATP6V0CP27449 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
ATP6V0CP27449 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6V0CP27449 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
ATP6V0CP27449 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP6V0CP27449 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ATP6V0CP27449 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.8■□□□□ 0.92
ATP6V0CP27449 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ATP6V0CP27449 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.78■□□□□ 0.92
ATP6V0CP27449 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ATP6V0CP27449 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC20.78■□□□□ 0.92
ATP6V0CP27449 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
ATP6V0CP27449 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.77■□□□□ 0.92
ATP6V0CP27449 BX255925.1-201ENST00000566954 1854 ntBASIC20.77■□□□□ 0.92
ATP6V0CP27449 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC20.76■□□□□ 0.91
ATP6V0CP27449 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0CP27449 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms