Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC35.73■■■■□ 3.31
COL5A2P05997 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC35.72■■■■□ 3.31
COL5A2P05997 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC35.71■■■■□ 3.31
COL5A2P05997 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC35.71■■■■□ 3.31
COL5A2P05997 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC35.7■■■■□ 3.31
COL5A2P05997 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC35.7■■■■□ 3.31
COL5A2P05997 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC35.7■■■■□ 3.31
COL5A2P05997 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC35.68■■■■□ 3.3
COL5A2P05997 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC35.67■■■■□ 3.3
COL5A2P05997 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC35.66■■■■□ 3.3
COL5A2P05997 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC35.66■■■■□ 3.3
COL5A2P05997 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC35.66■■■■□ 3.3
COL5A2P05997 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC35.65■■■■□ 3.3
COL5A2P05997 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC35.64■■■■□ 3.3
COL5A2P05997 HES6-205ENST00000409356 528 ntTSL 2 BASIC35.63■■■■□ 3.29
COL5A2P05997 SRP68-213ENST00000629930 165 ntTSL 5 BASIC35.63■■■■□ 3.29
COL5A2P05997 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC35.6■■■■□ 3.29
COL5A2P05997 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC35.58■■■■□ 3.29
COL5A2P05997 CHML-204ENST00000638121 920 ntTSL 2 BASIC35.58■■■■□ 3.29
COL5A2P05997 EI24-212ENST00000615917 1407 ntTSL 2 BASIC35.58■■■■□ 3.29
COL5A2P05997 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC35.57■■■■□ 3.29
COL5A2P05997 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC35.57■■■■□ 3.28
COL5A2P05997 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC35.56■■■■□ 3.28
COL5A2P05997 RARRES2P2-201ENST00000394842 485 ntBASIC35.55■■■■□ 3.28
COL5A2P05997 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC35.55■■■■□ 3.28
COL5A2P05997 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC35.53■■■■□ 3.28
COL5A2P05997 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC35.53■■■■□ 3.28
COL5A2P05997 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC35.53■■■■□ 3.28
COL5A2P05997 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
COL5A2P05997 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC35.51■■■■□ 3.27
COL5A2P05997 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
COL5A2P05997 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
COL5A2P05997 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
COL5A2P05997 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
COL5A2P05997 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC35.5■■■■□ 3.27
COL5A2P05997 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
COL5A2P05997 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
COL5A2P05997 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC35.5■■■■□ 3.27
COL5A2P05997 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC35.5■■■■□ 3.27
COL5A2P05997 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
COL5A2P05997 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
COL5A2P05997 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC35.49■■■■□ 3.27
COL5A2P05997 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
COL5A2P05997 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC35.48■■■■□ 3.27
COL5A2P05997 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
COL5A2P05997 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC35.46■■■■□ 3.27
COL5A2P05997 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
COL5A2P05997 ABHD17AP5-201ENST00000580133 923 ntBASIC35.46■■■■□ 3.27
COL5A2P05997 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC35.45■■■■□ 3.26
COL5A2P05997 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC35.44■■■■□ 3.26
COL5A2P05997 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC35.43■■■■□ 3.26
COL5A2P05997 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC35.43■■■■□ 3.26
COL5A2P05997 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC35.43■■■■□ 3.26
COL5A2P05997 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC35.42■■■■□ 3.26
COL5A2P05997 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
COL5A2P05997 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC35.41■■■■□ 3.26
COL5A2P05997 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC35.41■■■■□ 3.26
COL5A2P05997 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC35.4■■■■□ 3.26
COL5A2P05997 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC35.4■■■■□ 3.26
COL5A2P05997 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC35.4■■■■□ 3.26
COL5A2P05997 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC35.39■■■■□ 3.26
COL5A2P05997 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
COL5A2P05997 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
COL5A2P05997 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC35.38■■■■□ 3.25
COL5A2P05997 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC35.37■■■■□ 3.25
COL5A2P05997 AC120057.4-201ENST00000624722 1615 ntBASIC35.37■■■■□ 3.25
COL5A2P05997 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
COL5A2P05997 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC35.36■■■■□ 3.25
COL5A2P05997 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.35■■■■□ 3.25
COL5A2P05997 GPX1-201ENST00000419349 1106 ntBASIC35.35■■■■□ 3.25
COL5A2P05997 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC35.34■■■■□ 3.25
COL5A2P05997 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
COL5A2P05997 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC35.33■■■■□ 3.25
COL5A2P05997 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
COL5A2P05997 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC35.32■■■■□ 3.24
COL5A2P05997 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC35.31■■■■□ 3.24
COL5A2P05997 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
COL5A2P05997 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
COL5A2P05997 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC35.29■■■■□ 3.24
COL5A2P05997 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC35.29■■■■□ 3.24
COL5A2P05997 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC35.29■■■■□ 3.24
COL5A2P05997 CHST11-202ENST00000546689 756 ntTSL 2 BASIC35.29■■■■□ 3.24
COL5A2P05997 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC35.29■■■■□ 3.24
COL5A2P05997 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC35.28■■■■□ 3.24
COL5A2P05997 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC35.28■■■■□ 3.24
COL5A2P05997 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC35.26■■■■□ 3.23
COL5A2P05997 LINC00273-201ENST00000539813 1452 ntBASIC35.25■■■■□ 3.23
COL5A2P05997 RNF126P1-201ENST00000567452 1320 ntBASIC35.24■■■■□ 3.23
COL5A2P05997 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC35.24■■■■□ 3.23
COL5A2P05997 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC35.24■■■■□ 3.23
COL5A2P05997 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
COL5A2P05997 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
COL5A2P05997 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC35.23■■■■□ 3.23
COL5A2P05997 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
COL5A2P05997 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC35.22■■■■□ 3.23
COL5A2P05997 TPT1-202ENST00000379055 948 ntTSL 2 BASIC35.22■■■■□ 3.23
COL5A2P05997 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC35.21■■■■□ 3.23
COL5A2P05997 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC35.21■■■■□ 3.23
COL5A2P05997 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC35.21■■■■□ 3.23
COL5A2P05997 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC35.2■■■■□ 3.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms