Protein–RNA interactions for Protein: O60673

REV3L, DNA polymerase zeta catalytic subunit, humanhuman

Predictions only

Length 3,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REV3LO60673 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
REV3LO60673 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC28.38■■■□□ 2.13
REV3LO60673 RNF130-201ENST00000261947 1766 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
REV3LO60673 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.38■■■□□ 2.13
REV3LO60673 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
REV3LO60673 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
REV3LO60673 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
REV3LO60673 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
REV3LO60673 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
REV3LO60673 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
REV3LO60673 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC28.35■■■□□ 2.13
REV3LO60673 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC28.34■■■□□ 2.13
REV3LO60673 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC28.33■■■□□ 2.13
REV3LO60673 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
REV3LO60673 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
REV3LO60673 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
REV3LO60673 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
REV3LO60673 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
REV3LO60673 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
REV3LO60673 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
REV3LO60673 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
REV3LO60673 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
REV3LO60673 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
REV3LO60673 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
REV3LO60673 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
REV3LO60673 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
REV3LO60673 NTF6A-201ENST00000591175 560 ntBASIC28.29■■■□□ 2.12
REV3LO60673 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.29■■■□□ 2.12
REV3LO60673 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.29■■■□□ 2.12
REV3LO60673 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
REV3LO60673 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
REV3LO60673 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.27■■■□□ 2.12
REV3LO60673 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
REV3LO60673 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC28.26■■■□□ 2.11
REV3LO60673 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
REV3LO60673 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.11
REV3LO60673 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
REV3LO60673 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.25■■■□□ 2.11
REV3LO60673 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
REV3LO60673 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.23■■■□□ 2.11
REV3LO60673 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC28.22■■■□□ 2.11
REV3LO60673 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.21■■■□□ 2.11
REV3LO60673 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
REV3LO60673 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
REV3LO60673 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
REV3LO60673 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
REV3LO60673 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.18■■■□□ 2.1
REV3LO60673 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
REV3LO60673 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC28.18■■■□□ 2.1
REV3LO60673 AC012354.3-201ENST00000623734 483 ntBASIC28.18■■■□□ 2.1
REV3LO60673 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
REV3LO60673 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
REV3LO60673 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC28.17■■■□□ 2.1
REV3LO60673 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
REV3LO60673 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
REV3LO60673 AC008813.1-201ENST00000536597 885 ntBASIC28.16■■■□□ 2.1
REV3LO60673 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.16■■■□□ 2.1
REV3LO60673 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.16■■■□□ 2.1
REV3LO60673 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC28.14■■■□□ 2.09
REV3LO60673 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
REV3LO60673 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.13■■■□□ 2.09
REV3LO60673 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC28.13■■■□□ 2.09
REV3LO60673 AL033527.3-201ENST00000566366 1196 ntBASIC28.13■■■□□ 2.09
REV3LO60673 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC28.13■■■□□ 2.09
REV3LO60673 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC28.12■■■□□ 2.09
REV3LO60673 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.12■■■□□ 2.09
REV3LO60673 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC28.12■■■□□ 2.09
REV3LO60673 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.12■■■□□ 2.09
REV3LO60673 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
REV3LO60673 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.12■■■□□ 2.09
REV3LO60673 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
REV3LO60673 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC28.11■■■□□ 2.09
REV3LO60673 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC28.1■■■□□ 2.09
REV3LO60673 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
REV3LO60673 CTDNEP1-201ENST00000318988 1549 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
REV3LO60673 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.1■■■□□ 2.09
REV3LO60673 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
REV3LO60673 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
REV3LO60673 AC018358.1-201ENST00000631079 1402 ntBASIC28.08■■■□□ 2.09
REV3LO60673 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
REV3LO60673 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.06■■■□□ 2.08
REV3LO60673 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
REV3LO60673 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.06■■■□□ 2.08
REV3LO60673 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.05■■■□□ 2.08
REV3LO60673 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
REV3LO60673 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.05■■■□□ 2.08
REV3LO60673 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.03■■■□□ 2.08
REV3LO60673 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
REV3LO60673 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.03■■■□□ 2.08
REV3LO60673 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
REV3LO60673 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.03■■■□□ 2.08
REV3LO60673 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
REV3LO60673 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
REV3LO60673 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.02■■■□□ 2.08
REV3LO60673 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
REV3LO60673 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.01■■■□□ 2.08
REV3LO60673 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
REV3LO60673 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28■■■□□ 2.07
REV3LO60673 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
REV3LO60673 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.99■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms