Protein–RNA interactions for Protein: O15164

TRIM24, Transcription intermediary factor 1-alpha, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM24O15164 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TRIM24O15164 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
TRIM24O15164 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
TRIM24O15164 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
TRIM24O15164 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
TRIM24O15164 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
TRIM24O15164 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.19■■□□□ 1.94
TRIM24O15164 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM24O15164 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
TRIM24O15164 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC27.18■■□□□ 1.94
TRIM24O15164 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC27.18■■□□□ 1.94
TRIM24O15164 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC27.18■■□□□ 1.94
TRIM24O15164 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
TRIM24O15164 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM24O15164 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
TRIM24O15164 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.15■■□□□ 1.94
TRIM24O15164 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.15■■□□□ 1.94
TRIM24O15164 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TRIM24O15164 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TRIM24O15164 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
TRIM24O15164 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
TRIM24O15164 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC27.13■■□□□ 1.93
TRIM24O15164 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TRIM24O15164 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TRIM24O15164 RPS2-202ENST00000526522 924 ntTSL 2 BASIC27.12■■□□□ 1.93
TRIM24O15164 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
TRIM24O15164 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TRIM24O15164 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM24O15164 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM24O15164 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.11■■□□□ 1.93
TRIM24O15164 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM24O15164 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM24O15164 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.11■■□□□ 1.93
TRIM24O15164 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.1■■□□□ 1.93
TRIM24O15164 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.09■■□□□ 1.93
TRIM24O15164 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC27.09■■□□□ 1.93
TRIM24O15164 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM24O15164 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.09■■□□□ 1.93
TRIM24O15164 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
TRIM24O15164 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM24O15164 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM24O15164 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TRIM24O15164 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
TRIM24O15164 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM24O15164 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM24O15164 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRIM24O15164 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TRIM24O15164 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRIM24O15164 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.04■■□□□ 1.92
TRIM24O15164 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC27.03■■□□□ 1.92
TRIM24O15164 RNF166-209ENST00000567844 633 ntTSL 5 BASIC27.03■■□□□ 1.92
TRIM24O15164 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC27.02■■□□□ 1.92
TRIM24O15164 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27■■□□□ 1.91
TRIM24O15164 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.99■■□□□ 1.91
TRIM24O15164 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TRIM24O15164 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC26.99■■□□□ 1.91
TRIM24O15164 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.99■■□□□ 1.91
TRIM24O15164 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TRIM24O15164 DUX4L11-201ENST00000611504 1267 ntBASIC26.98■■□□□ 1.91
TRIM24O15164 DUX4L12-201ENST00000614593 1267 ntBASIC26.98■■□□□ 1.91
TRIM24O15164 DUX4L14-201ENST00000621227 1267 ntBASIC26.98■■□□□ 1.91
TRIM24O15164 MIR3648-2-201ENST00000581792 180 ntBASIC26.97■■□□□ 1.91
TRIM24O15164 AC016575.1-201ENST00000607026 382 ntBASIC26.97■■□□□ 1.91
TRIM24O15164 MIR3648-1-201ENST00000615959 180 ntBASIC26.97■■□□□ 1.91
TRIM24O15164 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC26.96■■□□□ 1.91
TRIM24O15164 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.96■■□□□ 1.91
TRIM24O15164 LINC01971-201ENST00000617888 1048 ntBASIC26.96■■□□□ 1.91
TRIM24O15164 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
TRIM24O15164 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.95■■□□□ 1.91
TRIM24O15164 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.95■■□□□ 1.9
TRIM24O15164 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM24O15164 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
TRIM24O15164 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
TRIM24O15164 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TRIM24O15164 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.93■■□□□ 1.9
TRIM24O15164 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.93■■□□□ 1.9
TRIM24O15164 CR559946.2-201ENST00000623684 991 ntBASIC26.93■■□□□ 1.9
TRIM24O15164 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
TRIM24O15164 MIR639-201ENST00000384974 98 ntBASIC26.92■■□□□ 1.9
TRIM24O15164 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.92■■□□□ 1.9
TRIM24O15164 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.91■■□□□ 1.9
TRIM24O15164 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC26.91■■□□□ 1.9
TRIM24O15164 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
TRIM24O15164 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TRIM24O15164 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
TRIM24O15164 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
TRIM24O15164 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.89■■□□□ 1.9
TRIM24O15164 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
TRIM24O15164 AC010864.1-201ENST00000609407 1511 ntBASIC26.89■■□□□ 1.89
TRIM24O15164 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.89■■□□□ 1.89
TRIM24O15164 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.88■■□□□ 1.89
TRIM24O15164 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
TRIM24O15164 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM24O15164 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.87■■□□□ 1.89
TRIM24O15164 MIR4449-201ENST00000578365 66 ntBASIC26.87■■□□□ 1.89
TRIM24O15164 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.86■■□□□ 1.89
TRIM24O15164 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM24O15164 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
TRIM24O15164 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.85■■□□□ 1.89
TRIM24O15164 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 1269.7 ms