Protein–RNA interactions for Protein: A6NLU0

RFPL4A, Ret finger protein-like 4A, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AA6NLU0 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RFPL4AA6NLU0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RFPL4AA6NLU0 CAHM-201ENST00000604200 896 ntBASIC22.47■■□□□ 1.19
RFPL4AA6NLU0 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
RFPL4AA6NLU0 AL391121.1-201ENST00000607967 1349 ntBASIC22.47■■□□□ 1.19
RFPL4AA6NLU0 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RFPL4AA6NLU0 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.46■■□□□ 1.19
RFPL4AA6NLU0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RFPL4AA6NLU0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RFPL4AA6NLU0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RFPL4AA6NLU0 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RFPL4AA6NLU0 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
RFPL4AA6NLU0 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC22.45■■□□□ 1.18
RFPL4AA6NLU0 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC22.45■■□□□ 1.18
RFPL4AA6NLU0 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC22.45■■□□□ 1.18
RFPL4AA6NLU0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RFPL4AA6NLU0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.44■■□□□ 1.18
RFPL4AA6NLU0 EBPL-202ENST00000378268 680 ntTSL 3 BASIC22.43■■□□□ 1.18
RFPL4AA6NLU0 AC142086.6-201ENST00000621154 1765 ntBASIC22.43■■□□□ 1.18
RFPL4AA6NLU0 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RFPL4AA6NLU0 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC22.42■■□□□ 1.18
RFPL4AA6NLU0 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RFPL4AA6NLU0 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC22.42■■□□□ 1.18
RFPL4AA6NLU0 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFPL4AA6NLU0 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RFPL4AA6NLU0 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFPL4AA6NLU0 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFPL4AA6NLU0 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
RFPL4AA6NLU0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RFPL4AA6NLU0 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RFPL4AA6NLU0 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RFPL4AA6NLU0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.39■■□□□ 1.17
RFPL4AA6NLU0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RFPL4AA6NLU0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RFPL4AA6NLU0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
RFPL4AA6NLU0 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC22.38■■□□□ 1.17
RFPL4AA6NLU0 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
RFPL4AA6NLU0 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.37■■□□□ 1.17
RFPL4AA6NLU0 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
RFPL4AA6NLU0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL4AA6NLU0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL4AA6NLU0 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC22.36■■□□□ 1.17
RFPL4AA6NLU0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL4AA6NLU0 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
RFPL4AA6NLU0 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
RFPL4AA6NLU0 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
RFPL4AA6NLU0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22.34■■□□□ 1.17
RFPL4AA6NLU0 AC135731.1-201ENST00000569415 2548 ntBASIC22.34■■□□□ 1.17
RFPL4AA6NLU0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RFPL4AA6NLU0 ST7-AS1-201ENST00000456775 1889 ntBASIC22.33■■□□□ 1.17
RFPL4AA6NLU0 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
RFPL4AA6NLU0 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
RFPL4AA6NLU0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
RFPL4AA6NLU0 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
RFPL4AA6NLU0 DENR-202ENST00000455982 1052 ntTSL 5 BASIC22.31■■□□□ 1.16
RFPL4AA6NLU0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.3■■□□□ 1.16
RFPL4AA6NLU0 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RFPL4AA6NLU0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
RFPL4AA6NLU0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
RFPL4AA6NLU0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFPL4AA6NLU0 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFPL4AA6NLU0 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC22.29■■□□□ 1.16
RFPL4AA6NLU0 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFPL4AA6NLU0 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFPL4AA6NLU0 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
RFPL4AA6NLU0 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
RFPL4AA6NLU0 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
RFPL4AA6NLU0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFPL4AA6NLU0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFPL4AA6NLU0 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFPL4AA6NLU0 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RFPL4AA6NLU0 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RFPL4AA6NLU0 SUZ12P1-203ENST00000578195 985 ntBASIC22.28■■□□□ 1.16
RFPL4AA6NLU0 AL135925.1-201ENST00000605920 1701 ntBASIC22.28■■□□□ 1.16
RFPL4AA6NLU0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RFPL4AA6NLU0 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFPL4AA6NLU0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RFPL4AA6NLU0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
RFPL4AA6NLU0 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RFPL4AA6NLU0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
RFPL4AA6NLU0 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RFPL4AA6NLU0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
RFPL4AA6NLU0 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFPL4AA6NLU0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFPL4AA6NLU0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RFPL4AA6NLU0 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RFPL4AA6NLU0 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RFPL4AA6NLU0 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFPL4AA6NLU0 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC22.24■■□□□ 1.15
RFPL4AA6NLU0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFPL4AA6NLU0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.24■■□□□ 1.15
RFPL4AA6NLU0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RFPL4AA6NLU0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFPL4AA6NLU0 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RFPL4AA6NLU0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
RFPL4AA6NLU0 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RFPL4AA6NLU0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RFPL4AA6NLU0 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RFPL4AA6NLU0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
RFPL4AA6NLU0 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 845.9 ms