Protein–RNA interactions for Protein: A5YM72

CARNS1, Carnosine synthase 1, humanhuman

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARNS1A5YM72 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
CARNS1A5YM72 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC28.37■■■□□ 2.13
CARNS1A5YM72 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CARNS1A5YM72 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
CARNS1A5YM72 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
CARNS1A5YM72 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
CARNS1A5YM72 DUX4L13-201ENST00000554103 1267 ntBASIC28.34■■■□□ 2.13
CARNS1A5YM72 DUX4L15-201ENST00000611059 1267 ntBASIC28.34■■■□□ 2.13
CARNS1A5YM72 DUX4L23-201ENST00000615195 1269 ntBASIC28.34■■■□□ 2.13
CARNS1A5YM72 DUX4L24-201ENST00000617576 1269 ntBASIC28.34■■■□□ 2.13
CARNS1A5YM72 DUX4L22-201ENST00000618238 1269 ntBASIC28.34■■■□□ 2.13
CARNS1A5YM72 DUX4L20-201ENST00000619712 1269 ntBASIC28.34■■■□□ 2.13
CARNS1A5YM72 DUX4L21-201ENST00000622058 1269 ntBASIC28.34■■■□□ 2.13
CARNS1A5YM72 DUX4L10-201ENST00000622460 1267 ntBASIC28.34■■■□□ 2.13
CARNS1A5YM72 DUX4L25-201ENST00000624915 1269 ntBASIC28.34■■■□□ 2.13
CARNS1A5YM72 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
CARNS1A5YM72 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC28.33■■■□□ 2.13
CARNS1A5YM72 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CARNS1A5YM72 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CARNS1A5YM72 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
CARNS1A5YM72 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
CARNS1A5YM72 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
CARNS1A5YM72 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
CARNS1A5YM72 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
CARNS1A5YM72 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC28.3■■■□□ 2.12
CARNS1A5YM72 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC28.3■■■□□ 2.12
CARNS1A5YM72 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
CARNS1A5YM72 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.28■■■□□ 2.12
CARNS1A5YM72 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC28.27■■■□□ 2.12
CARNS1A5YM72 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
CARNS1A5YM72 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
CARNS1A5YM72 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
CARNS1A5YM72 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
CARNS1A5YM72 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
CARNS1A5YM72 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CARNS1A5YM72 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC28.23■■■□□ 2.11
CARNS1A5YM72 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC28.23■■■□□ 2.11
CARNS1A5YM72 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
CARNS1A5YM72 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
CARNS1A5YM72 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.22■■■□□ 2.11
CARNS1A5YM72 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CARNS1A5YM72 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC28.21■■■□□ 2.11
CARNS1A5YM72 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
CARNS1A5YM72 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC28.2■■■□□ 2.1
CARNS1A5YM72 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC28.2■■■□□ 2.1
CARNS1A5YM72 HSD17B1P1-201ENST00000590052 955 ntBASIC28.2■■■□□ 2.1
CARNS1A5YM72 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.2■■■□□ 2.1
CARNS1A5YM72 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC28.19■■■□□ 2.1
CARNS1A5YM72 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
CARNS1A5YM72 HES6-205ENST00000409356 528 ntTSL 2 BASIC28.19■■■□□ 2.1
CARNS1A5YM72 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC28.18■■■□□ 2.1
CARNS1A5YM72 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
CARNS1A5YM72 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC28.18■■■□□ 2.1
CARNS1A5YM72 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC28.18■■■□□ 2.1
CARNS1A5YM72 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC28.18■■■□□ 2.1
CARNS1A5YM72 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
CARNS1A5YM72 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
CARNS1A5YM72 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
CARNS1A5YM72 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC28.12■■■□□ 2.09
CARNS1A5YM72 LINC00273-201ENST00000539813 1452 ntBASIC28.12■■■□□ 2.09
CARNS1A5YM72 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC28.11■■■□□ 2.09
CARNS1A5YM72 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC28.11■■■□□ 2.09
CARNS1A5YM72 METRNL-202ENST00000570778 967 ntTSL 5 BASIC28.11■■■□□ 2.09
CARNS1A5YM72 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
CARNS1A5YM72 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
CARNS1A5YM72 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC28.1■■■□□ 2.09
CARNS1A5YM72 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
CARNS1A5YM72 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CARNS1A5YM72 ABHD17AP3-201ENST00000503096 1137 ntBASIC28.09■■■□□ 2.09
CARNS1A5YM72 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
CARNS1A5YM72 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC28.09■■■□□ 2.09
CARNS1A5YM72 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.08■■■□□ 2.08
CARNS1A5YM72 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
CARNS1A5YM72 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC28.07■■■□□ 2.08
CARNS1A5YM72 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.07■■■□□ 2.08
CARNS1A5YM72 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
CARNS1A5YM72 AL161658.1-201ENST00000623641 1967 ntBASIC28.07■■■□□ 2.08
CARNS1A5YM72 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
CARNS1A5YM72 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC28.06■■■□□ 2.08
CARNS1A5YM72 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CARNS1A5YM72 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
CARNS1A5YM72 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.05■■■□□ 2.08
CARNS1A5YM72 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
CARNS1A5YM72 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CARNS1A5YM72 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
CARNS1A5YM72 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC28.04■■■□□ 2.08
CARNS1A5YM72 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
CARNS1A5YM72 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC28.04■■■□□ 2.08
CARNS1A5YM72 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC28.04■■■□□ 2.08
CARNS1A5YM72 AC010864.1-201ENST00000609407 1511 ntBASIC28.03■■■□□ 2.08
CARNS1A5YM72 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.03■■■□□ 2.08
CARNS1A5YM72 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.03■■■□□ 2.08
CARNS1A5YM72 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.03■■■□□ 2.08
CARNS1A5YM72 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
CARNS1A5YM72 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CARNS1A5YM72 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CARNS1A5YM72 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CARNS1A5YM72 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC28.02■■■□□ 2.08
CARNS1A5YM72 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
CARNS1A5YM72 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms