Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.67■■■□□ 2.5
CCDC196A0A1B0GTZ2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
CCDC196A0A1B0GTZ2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC30.65■■■□□ 2.5
CCDC196A0A1B0GTZ2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
CCDC196A0A1B0GTZ2 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC30.65■■■□□ 2.5
CCDC196A0A1B0GTZ2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
CCDC196A0A1B0GTZ2 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC30.63■■■□□ 2.49
CCDC196A0A1B0GTZ2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
CCDC196A0A1B0GTZ2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.62■■■□□ 2.49
CCDC196A0A1B0GTZ2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC196A0A1B0GTZ2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC196A0A1B0GTZ2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
CCDC196A0A1B0GTZ2 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC30.61■■■□□ 2.49
CCDC196A0A1B0GTZ2 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
CCDC196A0A1B0GTZ2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
CCDC196A0A1B0GTZ2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
CCDC196A0A1B0GTZ2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC30.59■■■□□ 2.49
CCDC196A0A1B0GTZ2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.58■■■□□ 2.49
CCDC196A0A1B0GTZ2 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC196A0A1B0GTZ2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.58■■■□□ 2.49
CCDC196A0A1B0GTZ2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
CCDC196A0A1B0GTZ2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
CCDC196A0A1B0GTZ2 AL162393.1-201ENST00000437852 946 ntBASIC30.57■■■□□ 2.48
CCDC196A0A1B0GTZ2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
CCDC196A0A1B0GTZ2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
CCDC196A0A1B0GTZ2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC196A0A1B0GTZ2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
CCDC196A0A1B0GTZ2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.53■■■□□ 2.48
CCDC196A0A1B0GTZ2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
CCDC196A0A1B0GTZ2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC196A0A1B0GTZ2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC196A0A1B0GTZ2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.52■■■□□ 2.48
CCDC196A0A1B0GTZ2 AC087741.3-201ENST00000624270 1347 ntBASIC30.5■■■□□ 2.47
CCDC196A0A1B0GTZ2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.5■■■□□ 2.47
CCDC196A0A1B0GTZ2 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC196A0A1B0GTZ2 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC30.5■■■□□ 2.47
CCDC196A0A1B0GTZ2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.5■■■□□ 2.47
CCDC196A0A1B0GTZ2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC196A0A1B0GTZ2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
CCDC196A0A1B0GTZ2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC196A0A1B0GTZ2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
CCDC196A0A1B0GTZ2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
CCDC196A0A1B0GTZ2 AC108673.1-201ENST00000510422 1159 ntBASIC30.48■■■□□ 2.47
CCDC196A0A1B0GTZ2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.48■■■□□ 2.47
CCDC196A0A1B0GTZ2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC196A0A1B0GTZ2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
CCDC196A0A1B0GTZ2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
CCDC196A0A1B0GTZ2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CCDC196A0A1B0GTZ2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CCDC196A0A1B0GTZ2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
CCDC196A0A1B0GTZ2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.44■■■□□ 2.46
CCDC196A0A1B0GTZ2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
CCDC196A0A1B0GTZ2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
CCDC196A0A1B0GTZ2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.43■■■□□ 2.46
CCDC196A0A1B0GTZ2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.43■■■□□ 2.46
CCDC196A0A1B0GTZ2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.42■■■□□ 2.46
CCDC196A0A1B0GTZ2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.42■■■□□ 2.46
CCDC196A0A1B0GTZ2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.42■■■□□ 2.46
CCDC196A0A1B0GTZ2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC196A0A1B0GTZ2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
CCDC196A0A1B0GTZ2 AC044849.2-201ENST00000606596 710 ntBASIC30.41■■■□□ 2.46
CCDC196A0A1B0GTZ2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
CCDC196A0A1B0GTZ2 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
CCDC196A0A1B0GTZ2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC30.4■■■□□ 2.46
CCDC196A0A1B0GTZ2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC196A0A1B0GTZ2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC196A0A1B0GTZ2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC196A0A1B0GTZ2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
CCDC196A0A1B0GTZ2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC30.38■■■□□ 2.45
CCDC196A0A1B0GTZ2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC196A0A1B0GTZ2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC196A0A1B0GTZ2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
CCDC196A0A1B0GTZ2 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC30.38■■■□□ 2.45
CCDC196A0A1B0GTZ2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.38■■■□□ 2.45
CCDC196A0A1B0GTZ2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.37■■■□□ 2.45
CCDC196A0A1B0GTZ2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
CCDC196A0A1B0GTZ2 ABCB10P3-201ENST00000561950 2166 ntBASIC30.37■■■□□ 2.45
CCDC196A0A1B0GTZ2 MIR6090-201ENST00000622481 60 ntBASIC30.36■■■□□ 2.45
CCDC196A0A1B0GTZ2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CCDC196A0A1B0GTZ2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
CCDC196A0A1B0GTZ2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.35■■■□□ 2.45
CCDC196A0A1B0GTZ2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
CCDC196A0A1B0GTZ2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.34■■■□□ 2.45
CCDC196A0A1B0GTZ2 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
CCDC196A0A1B0GTZ2 RPS2P35-201ENST00000443417 897 ntBASIC30.33■■■□□ 2.45
CCDC196A0A1B0GTZ2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC196A0A1B0GTZ2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.32■■■□□ 2.44
CCDC196A0A1B0GTZ2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
CCDC196A0A1B0GTZ2 AC127502.1-201ENST00000399971 1502 ntBASIC30.32■■■□□ 2.44
CCDC196A0A1B0GTZ2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.31■■■□□ 2.44
CCDC196A0A1B0GTZ2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC196A0A1B0GTZ2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC196A0A1B0GTZ2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC30.3■■■□□ 2.44
CCDC196A0A1B0GTZ2 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC30.3■■■□□ 2.44
CCDC196A0A1B0GTZ2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.29■■■□□ 2.44
CCDC196A0A1B0GTZ2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.29■■■□□ 2.44
CCDC196A0A1B0GTZ2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
CCDC196A0A1B0GTZ2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.28■■■□□ 2.44
CCDC196A0A1B0GTZ2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
CCDC196A0A1B0GTZ2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.27■■■□□ 2.44
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms