Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 AL135925.1-201ENST00000605920 1701 ntBASIC17.31■□□□□ 0.36
IGKV2-28A0A075B6P5 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC17.3■□□□□ 0.36
IGKV2-28A0A075B6P5 AC135731.1-201ENST00000569415 2548 ntBASIC17.3■□□□□ 0.36
IGKV2-28A0A075B6P5 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC17.29■□□□□ 0.36
IGKV2-28A0A075B6P5 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV2-28A0A075B6P5 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
IGKV2-28A0A075B6P5 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.28■□□□□ 0.36
IGKV2-28A0A075B6P5 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
IGKV2-28A0A075B6P5 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV2-28A0A075B6P5 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
IGKV2-28A0A075B6P5 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV2-28A0A075B6P5 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV2-28A0A075B6P5 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC17.26■□□□□ 0.35
IGKV2-28A0A075B6P5 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV2-28A0A075B6P5 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
IGKV2-28A0A075B6P5 DRD5P2-201ENST00000421395 2012 ntBASIC17.26■□□□□ 0.35
IGKV2-28A0A075B6P5 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
IGKV2-28A0A075B6P5 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
IGKV2-28A0A075B6P5 SHF-207ENST00000560540 2062 ntTSL 5 BASIC17.25■□□□□ 0.35
IGKV2-28A0A075B6P5 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
IGKV2-28A0A075B6P5 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
IGKV2-28A0A075B6P5 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGKV2-28A0A075B6P5 DYNLL1-208ENST00000550178 581 ntBASIC17.24■□□□□ 0.35
IGKV2-28A0A075B6P5 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC17.24■□□□□ 0.35
IGKV2-28A0A075B6P5 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
IGKV2-28A0A075B6P5 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV2-28A0A075B6P5 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV2-28A0A075B6P5 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV2-28A0A075B6P5 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV2-28A0A075B6P5 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV2-28A0A075B6P5 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
IGKV2-28A0A075B6P5 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
IGKV2-28A0A075B6P5 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
IGKV2-28A0A075B6P5 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV2-28A0A075B6P5 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV2-28A0A075B6P5 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV2-28A0A075B6P5 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
IGKV2-28A0A075B6P5 AL139393.2-201ENST00000608721 2025 ntBASIC17.21■□□□□ 0.35
IGKV2-28A0A075B6P5 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
IGKV2-28A0A075B6P5 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV2-28A0A075B6P5 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV2-28A0A075B6P5 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV2-28A0A075B6P5 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
IGKV2-28A0A075B6P5 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
IGKV2-28A0A075B6P5 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV2-28A0A075B6P5 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.19■□□□□ 0.34
IGKV2-28A0A075B6P5 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV2-28A0A075B6P5 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
IGKV2-28A0A075B6P5 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC17.18■□□□□ 0.34
IGKV2-28A0A075B6P5 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
IGKV2-28A0A075B6P5 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC17.18■□□□□ 0.34
IGKV2-28A0A075B6P5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV2-28A0A075B6P5 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV2-28A0A075B6P5 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
IGKV2-28A0A075B6P5 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC17.17■□□□□ 0.34
IGKV2-28A0A075B6P5 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV2-28A0A075B6P5 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.16■□□□□ 0.34
IGKV2-28A0A075B6P5 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV2-28A0A075B6P5 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IGKV2-28A0A075B6P5 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV2-28A0A075B6P5 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV2-28A0A075B6P5 AC243773.2-204ENST00000621428 1462 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IGKV2-28A0A075B6P5 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
IGKV2-28A0A075B6P5 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
IGKV2-28A0A075B6P5 EBPL-203ENST00000378270 579 ntTSL 2 BASIC17.14■□□□□ 0.33
IGKV2-28A0A075B6P5 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
IGKV2-28A0A075B6P5 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IGKV2-28A0A075B6P5 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
IGKV2-28A0A075B6P5 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IGKV2-28A0A075B6P5 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC17.13■□□□□ 0.33
IGKV2-28A0A075B6P5 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC17.13■□□□□ 0.33
IGKV2-28A0A075B6P5 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV2-28A0A075B6P5 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV2-28A0A075B6P5 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV2-28A0A075B6P5 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IGKV2-28A0A075B6P5 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV2-28A0A075B6P5 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV2-28A0A075B6P5 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV2-28A0A075B6P5 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.11■□□□□ 0.33
IGKV2-28A0A075B6P5 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
IGKV2-28A0A075B6P5 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC17.11■□□□□ 0.33
IGKV2-28A0A075B6P5 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
IGKV2-28A0A075B6P5 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGKV2-28A0A075B6P5 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGKV2-28A0A075B6P5 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IGKV2-28A0A075B6P5 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IGKV2-28A0A075B6P5 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV2-28A0A075B6P5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV2-28A0A075B6P5 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC17.09■□□□□ 0.33
IGKV2-28A0A075B6P5 AL031258.1-201ENST00000623562 325 ntBASIC17.09■□□□□ 0.33
IGKV2-28A0A075B6P5 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IGKV2-28A0A075B6P5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
IGKV2-28A0A075B6P5 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
IGKV2-28A0A075B6P5 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IGKV2-28A0A075B6P5 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
IGKV2-28A0A075B6P5 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
IGKV2-28A0A075B6P5 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
IGKV2-28A0A075B6P5 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
IGKV2-28A0A075B6P5 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
IGKV2-28A0A075B6P5 AP002365.1-201ENST00000603448 772 ntBASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms