Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC17.88■□□□□ 0.45
SFTPBP07988 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.88■□□□□ 0.45
SFTPBP07988 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
SFTPBP07988 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SFTPBP07988 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.88■□□□□ 0.45
SFTPBP07988 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SFTPBP07988 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC17.88■□□□□ 0.45
SFTPBP07988 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SFTPBP07988 LINC01521-201ENST00000504184 1943 ntBASIC17.88■□□□□ 0.45
SFTPBP07988 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SFTPBP07988 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.88■□□□□ 0.45
SFTPBP07988 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
SFTPBP07988 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SFTPBP07988 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SFTPBP07988 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
SFTPBP07988 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SFTPBP07988 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SFTPBP07988 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SFTPBP07988 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SFTPBP07988 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.87■□□□□ 0.45
SFTPBP07988 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.87■□□□□ 0.45
SFTPBP07988 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SFTPBP07988 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SFTPBP07988 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.87■□□□□ 0.45
SFTPBP07988 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC17.87■□□□□ 0.45
SFTPBP07988 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.87■□□□□ 0.45
SFTPBP07988 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SFTPBP07988 AC092666.2-201ENST00000613287 246 ntBASIC17.87■□□□□ 0.45
SFTPBP07988 RAB43-208ENST00000615093 783 ntTSL 5 BASIC17.87■□□□□ 0.45
SFTPBP07988 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SFTPBP07988 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.87■□□□□ 0.45
SFTPBP07988 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
SFTPBP07988 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SFTPBP07988 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC17.87■□□□□ 0.45
SFTPBP07988 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC17.87■□□□□ 0.45
SFTPBP07988 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.87■□□□□ 0.45
SFTPBP07988 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SFTPBP07988 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SFTPBP07988 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SFTPBP07988 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SFTPBP07988 AC005224.4-201ENST00000583262 1652 ntBASIC17.87■□□□□ 0.45
SFTPBP07988 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
SFTPBP07988 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
SFTPBP07988 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SFTPBP07988 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SFTPBP07988 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SFTPBP07988 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SFTPBP07988 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SFTPBP07988 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SFTPBP07988 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
SFTPBP07988 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC17.86■□□□□ 0.45
SFTPBP07988 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SFTPBP07988 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SFTPBP07988 BX005040.4-201ENST00000637145 1518 ntBASIC17.86■□□□□ 0.45
SFTPBP07988 STX5-203ENST00000394690 1568 ntTSL 5 BASIC17.86■□□□□ 0.45
SFTPBP07988 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SFTPBP07988 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SFTPBP07988 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SFTPBP07988 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SFTPBP07988 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC17.86■□□□□ 0.45
SFTPBP07988 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SFTPBP07988 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.86■□□□□ 0.45
SFTPBP07988 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SFTPBP07988 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SFTPBP07988 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SFTPBP07988 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SFTPBP07988 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SFTPBP07988 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
SFTPBP07988 AC034268.1-201ENST00000441047 882 ntBASIC17.85■□□□□ 0.45
SFTPBP07988 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.85■□□□□ 0.45
SFTPBP07988 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
SFTPBP07988 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC17.85■□□□□ 0.45
SFTPBP07988 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SFTPBP07988 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SFTPBP07988 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SFTPBP07988 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SFTPBP07988 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SFTPBP07988 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SFTPBP07988 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SFTPBP07988 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.84■□□□□ 0.45
SFTPBP07988 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.84■□□□□ 0.45
SFTPBP07988 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SFTPBP07988 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SFTPBP07988 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SFTPBP07988 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.84■□□□□ 0.45
SFTPBP07988 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SFTPBP07988 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SFTPBP07988 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.84■□□□□ 0.45
SFTPBP07988 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SFTPBP07988 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
SFTPBP07988 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SFTPBP07988 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.84■□□□□ 0.45
SFTPBP07988 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SFTPBP07988 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SFTPBP07988 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SFTPBP07988 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.84■□□□□ 0.45
SFTPBP07988 PARL-206ENST00000435888 1098 ntTSL 5 BASIC17.84■□□□□ 0.45
SFTPBP07988 AC123595.1-201ENST00000440769 1046 ntBASIC17.84■□□□□ 0.45
SFTPBP07988 DUX4L2-201ENST00000561772 1275 ntBASIC17.84■□□□□ 0.45
SFTPBP07988 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms