RNA–Protein interactions for RNA: ENST00000565090.5

E4F1-206, Transcript of E4F transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene E4F1, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-206ENST00000565090 NISCHQ9Y2I1 1504 aa46.15■■■■■ 4.98
E4F1-206ENST00000565090 CCDC180Q9P1Z9 1646 aa40.11■■■■■ 4.01
E4F1-206ENST00000565090 ZCCHC6Q5VYS8 1495 aaKnown RBP38.9■■■■□ 3.82
E4F1-206ENST00000565090 DCAF1Q9Y4B6 1507 aa38.2■■■■□ 3.71
E4F1-206ENST00000565090 SHROOM4Q9ULL8 1493 aa37.86■■■■□ 3.65
E4F1-206ENST00000565090 DCAF8L2P0C7V8 631 aa37.73■■■■□ 3.63
E4F1-206ENST00000565090 MYO15BQ96JP2 1530 aa37.56■■■■□ 3.6
E4F1-206ENST00000565090 ABCC9O60706 1549 aa37.34■■■■□ 3.57
E4F1-206ENST00000565090 NACADO15069 1562 aa37.16■■■■□ 3.54
E4F1-206ENST00000565090 SCRIBQ14160 1630 aa36.88■■■■□ 3.49
E4F1-206ENST00000565090 RB1CC1Q8TDY2 1594 aa36.72■■■■□ 3.47
E4F1-206ENST00000565090 SUPT5HO00267 1087 aaKnown RBP36.63■■■■□ 3.45
E4F1-206ENST00000565090 UNC13AQ9UPW8 1703 aa36.18■■■■□ 3.38
E4F1-206ENST00000565090 RSF1Q96T23 1441 aaPredicted RBP35.95■■■■□ 3.35
E4F1-206ENST00000565090 CECR2Q9BXF3 1484 aa35.8■■■■□ 3.32
E4F1-206ENST00000565090 MROH2BQ7Z745 1585 aa35.68■■■■□ 3.3
E4F1-206ENST00000565090 BICRAQ9NZM4 1560 aa35.67■■■■□ 3.3
E4F1-206ENST00000565090 BAZ1AQ9NRL2 1556 aaPredicted RBP35.6■■■■□ 3.29
E4F1-206ENST00000565090 WIZO95785 1651 aa35.46■■■■□ 3.27
E4F1-206ENST00000565090 SMARCA4P51532 1647 aa35.42■■■■□ 3.26
E4F1-206ENST00000565090 CHIC1Q5VXU3 224 aa35.37■■■■□ 3.25
E4F1-206ENST00000565090 PABPN1Q86U42 306 aaKnown RBP eCLIP35.23■■■■□ 3.233e-6■■■■□ 23.3
E4F1-206ENST00000565090 TOP2AP11388 1531 aaKnown RBP35.07■■■■□ 3.21
E4F1-206ENST00000565090 PEG3Q9GZU2 1588 aa34.99■■■■□ 3.19
E4F1-206ENST00000565090 SMARCA2P51531 1590 aa34.78■■■■□ 3.16
E4F1-206ENST00000565090 EIF4G1Q04637 1599 aaKnown RBP34.78■■■■□ 3.16
E4F1-206ENST00000565090 CCDC88BA6NC98 1476 aa34.67■■■■□ 3.14
E4F1-206ENST00000565090 ATAD2BQ9ULI0 1458 aa34.65■■■■□ 3.14
E4F1-206ENST00000565090 BAZ1BQ9UIG0 1483 aaKnown RBP34.47■■■■□ 3.11
E4F1-206ENST00000565090 TRIM41Q8WV44 630 aa34.41■■■■□ 3.1
E4F1-206ENST00000565090 HMGXB3Q12766 1538 aa34.32■■■■□ 3.08
E4F1-206ENST00000565090 NCAPD3P42695 1498 aa34.26■■■■□ 3.08
E4F1-206ENST00000565090 ABCC8Q09428 1581 aa34.14■■■■□ 3.06
E4F1-206ENST00000565090 LOC105371045A0A1W2PR82 267 aa34.01■■■■□ 3.03
E4F1-206ENST00000565090 CC2D2AQ9P2K1 1620 aa33.89■■■■□ 3.02
E4F1-206ENST00000565090 WRNQ14191 1432 aaPredicted RBP eCLIP33.81■■■■□ 3
E4F1-206ENST00000565090 FAM9AQ8IZU1 332 aaPredicted RBP33.77■■■■□ 3
E4F1-206ENST00000565090 SYNJ1O43426 1573 aa33.74■■■□□ 2.99
E4F1-206ENST00000565090 PRDM2Q13029 1718 aa33.7■■■□□ 2.99
E4F1-206ENST00000565090 CFTRP13569 1480 aa33.65■■■□□ 2.98
E4F1-206ENST00000565090 EEA1Q15075 1411 aa33.59■■■□□ 2.97
E4F1-206ENST00000565090 BIVM-ERCC5R4GMW8 1640 aa33.57■■■□□ 2.97
E4F1-206ENST00000565090 TOP2BQ02880 1626 aa33.57■■■□□ 2.96
E4F1-206ENST00000565090 SOGA1O94964 1423 aa33.55■■■□□ 2.96
E4F1-206ENST00000565090 RUSC2Q8N2Y8 1516 aa33.42■■■□□ 2.94
E4F1-206ENST00000565090 CADPSQ9ULU8 1353 aa33.38■■■□□ 2.93
E4F1-206ENST00000565090 CUX1P39880 1505 aa33.33■■■□□ 2.93
E4F1-206ENST00000565090 CSRNP3Q8WYN3 585 aa33.28■■■□□ 2.92
E4F1-206ENST00000565090 EHMT2Q96KQ7 1210 aa33.24■■■□□ 2.91
E4F1-206ENST00000565090 KIF21BO75037 1637 aa33.22■■■□□ 2.91
E4F1-206ENST00000565090 GOLGA3Q08378 1498 aa33.16■■■□□ 2.9
E4F1-206ENST00000565090 TNIKQ9UKE5 1360 aa33.12■■■□□ 2.89
E4F1-206ENST00000565090 CEP164Q9UPV0 1460 aa33.11■■■□□ 2.89
E4F1-206ENST00000565090 LAMC3Q9Y6N6 1575 aa33.07■■■□□ 2.89
E4F1-206ENST00000565090 FANCD2Q9BXW9 1451 aa33.04■■■□□ 2.88
E4F1-206ENST00000565090 CEP162Q5TB80 1403 aa32.99■■■□□ 2.87
E4F1-206ENST00000565090 NESP48681 1621 aa32.98■■■□□ 2.87
E4F1-206ENST00000565090 PCGF6Q9BYE7 350 aa32.94■■■□□ 2.86
E4F1-206ENST00000565090 DNMBPQ6XZF7 1577 aa32.9■■■□□ 2.86
E4F1-206ENST00000565090 KIF27Q86VH2 1401 aa32.89■■■□□ 2.86
E4F1-206ENST00000565090 ERICH3Q5RHP9 1530 aa32.88■■■□□ 2.85
E4F1-206ENST00000565090 FGD5Q6ZNL6 1462 aa32.87■■■□□ 2.85
E4F1-206ENST00000565090 RAPGEF2Q9Y4G8 1499 aa32.86■■■□□ 2.85
E4F1-206ENST00000565090 TRIM26Q12899 539 aaPredicted RBP32.85■■■□□ 2.85
E4F1-206ENST00000565090 PRXQ9BXM0 1461 aa32.85■■■□□ 2.85
E4F1-206ENST00000565090 UBTFP17480 764 aaKnown RBP32.85■■■□□ 2.85
E4F1-206ENST00000565090 DNAJC5BQ9UF47 199 aa32.77■■■□□ 2.84
E4F1-206ENST00000565090 TOPBP1Q92547 1522 aa32.77■■■□□ 2.84
E4F1-206ENST00000565090 CUX2O14529 1486 aa32.7■■■□□ 2.83
E4F1-206ENST00000565090 PDS5BQ9NTI5 1447 aa32.7■■■□□ 2.82
E4F1-206ENST00000565090 KIF21AQ7Z4S6 1674 aa32.7■■■□□ 2.82
E4F1-206ENST00000565090 POLA1P09884 1462 aaPredicted RBP32.65■■■□□ 2.82
E4F1-206ENST00000565090 URB2Q14146 1524 aaKnown RBP32.64■■■□□ 2.82
E4F1-206ENST00000565090 CLIP1P30622 1438 aa32.61■■■□□ 2.81
E4F1-206ENST00000565090 ABCA10Q8WWZ4 1543 aa32.61■■■□□ 2.81
E4F1-206ENST00000565090 WDR97A6NE52 1622 aa32.59■■■□□ 2.81
E4F1-206ENST00000565090 IGF1RP08069 1367 aa32.54■■■□□ 2.8
E4F1-206ENST00000565090 RAD54L2Q9Y4B4 1467 aa32.51■■■□□ 2.79
E4F1-206ENST00000565090 HRCP23327 699 aa32.44■■■□□ 2.78
E4F1-206ENST00000565090 VPS8Q8N3P4 1428 aa32.43■■■□□ 2.78
E4F1-206ENST00000565090 CUL7Q14999 1698 aa32.38■■■□□ 2.77
E4F1-206ENST00000565090 CARMIL1Q5VZK9 1371 aa32.37■■■□□ 2.77
E4F1-206ENST00000565090 ABCA5Q8WWZ7 1642 aa32.37■■■□□ 2.77
E4F1-206ENST00000565090 PPARGC1BQ86YN6 1023 aaKnown RBP32.33■■■□□ 2.77
E4F1-206ENST00000565090 TARBP1Q13395 1621 aaKnown RBP32.31■■■□□ 2.76
E4F1-206ENST00000565090 MRC2Q9UBG0 1479 aa32.3■■■□□ 2.76
E4F1-206ENST00000565090 ARAP1Q96P48 1450 aa32.29■■■□□ 2.76
E4F1-206ENST00000565090 ARHGAP35Q9NRY4 1499 aa32.19■■■□□ 2.74
E4F1-206ENST00000565090 WDR62O43379 1518 aa32.17■■■□□ 2.74
E4F1-206ENST00000565090 GAPVD1Q14C86 1478 aa32.17■■■□□ 2.74
E4F1-206ENST00000565090 CTTNBP2Q8WZ74 1663 aa32.15■■■□□ 2.74
E4F1-206ENST00000565090 RANGAP1P46060 587 aaPredicted RBP32.14■■■□□ 2.74
E4F1-206ENST00000565090 TDRD9Q8NDG6 1382 aaKnown RBP32.1■■■□□ 2.73
E4F1-206ENST00000565090 PBRM1Q86U86 1689 aa32.09■■■□□ 2.73
E4F1-206ENST00000565090 THOC2Q8NI27 1593 aaKnown RBP32■■■□□ 2.71
E4F1-206ENST00000565090 TTBK1Q5TCY1 1321 aaPredicted RBP31.97■■■□□ 2.71
E4F1-206ENST00000565090 IFT140Q96RY7 1462 aa31.96■■■□□ 2.71
E4F1-206ENST00000565090 APLP2Q06481 763 aa31.95■■■□□ 2.71
E4F1-206ENST00000565090 EFCAB5A4FU69 1503 aa31.95■■■□□ 2.7
E4F1-206ENST00000565090 ERCC6Q03468 1493 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms