Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 AC005224.4-201ENST00000583262 1652 ntBASIC20.28■□□□□ 0.84
ITM2AO43736 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ITM2AO43736 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITM2AO43736 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ITM2AO43736 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ITM2AO43736 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITM2AO43736 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ITM2AO43736 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ITM2AO43736 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITM2AO43736 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.27■□□□□ 0.84
ITM2AO43736 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITM2AO43736 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.27■□□□□ 0.84
ITM2AO43736 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ITM2AO43736 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ITM2AO43736 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ITM2AO43736 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITM2AO43736 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ITM2AO43736 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ITM2AO43736 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITM2AO43736 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITM2AO43736 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITM2AO43736 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ITM2AO43736 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
ITM2AO43736 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.26■□□□□ 0.83
ITM2AO43736 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ITM2AO43736 AC233992.3-201ENST00000607491 485 ntBASIC20.26■□□□□ 0.83
ITM2AO43736 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ITM2AO43736 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.26■□□□□ 0.83
ITM2AO43736 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITM2AO43736 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ITM2AO43736 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ITM2AO43736 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.26■□□□□ 0.83
ITM2AO43736 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ITM2AO43736 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.25■□□□□ 0.83
ITM2AO43736 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITM2AO43736 AC011484.1-201ENST00000377652 1995 ntBASIC20.25■□□□□ 0.83
ITM2AO43736 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITM2AO43736 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.25■□□□□ 0.83
ITM2AO43736 IGHV3-19-201ENST00000521488 291 ntBASIC20.25■□□□□ 0.83
ITM2AO43736 AC126544.1-201ENST00000580842 1059 ntBASIC20.25■□□□□ 0.83
ITM2AO43736 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.25■□□□□ 0.83
ITM2AO43736 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.25■□□□□ 0.83
ITM2AO43736 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITM2AO43736 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.25■□□□□ 0.83
ITM2AO43736 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.25■□□□□ 0.83
ITM2AO43736 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITM2AO43736 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.25■□□□□ 0.83
ITM2AO43736 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
ITM2AO43736 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.24■□□□□ 0.83
ITM2AO43736 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.24■□□□□ 0.83
ITM2AO43736 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
ITM2AO43736 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITM2AO43736 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
ITM2AO43736 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ITM2AO43736 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.24■□□□□ 0.83
ITM2AO43736 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ITM2AO43736 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.24■□□□□ 0.83
ITM2AO43736 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITM2AO43736 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITM2AO43736 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITM2AO43736 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ITM2AO43736 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITM2AO43736 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
ITM2AO43736 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.24■□□□□ 0.83
ITM2AO43736 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITM2AO43736 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ITM2AO43736 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ITM2AO43736 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITM2AO43736 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITM2AO43736 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ITM2AO43736 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITM2AO43736 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITM2AO43736 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
ITM2AO43736 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITM2AO43736 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.23■□□□□ 0.83
ITM2AO43736 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITM2AO43736 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITM2AO43736 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.23■□□□□ 0.83
ITM2AO43736 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ITM2AO43736 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.23■□□□□ 0.83
ITM2AO43736 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
ITM2AO43736 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ITM2AO43736 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITM2AO43736 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITM2AO43736 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ITM2AO43736 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITM2AO43736 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITM2AO43736 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITM2AO43736 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITM2AO43736 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITM2AO43736 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
ITM2AO43736 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITM2AO43736 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITM2AO43736 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.22■□□□□ 0.83
ITM2AO43736 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ITM2AO43736 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.22■□□□□ 0.83
ITM2AO43736 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.22■□□□□ 0.83
ITM2AO43736 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ITM2AO43736 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ITM2AO43736 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms