RNA–Protein interactions for RNA: ENST00000376332.7

CHRDL2-203, Transcript of chordin like 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHRDL2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-203ENST00000376332 NISCHQ9Y2I1 1504 aa46.72■■■■■ 5.07
CHRDL2-203ENST00000376332 CCDC180Q9P1Z9 1646 aa40.78■■■■■ 4.12
CHRDL2-203ENST00000376332 ZCCHC6Q5VYS8 1495 aaKnown RBP39.16■■■■□ 3.86
CHRDL2-203ENST00000376332 DCAF8L2P0C7V8 631 aa38.93■■■■□ 3.82
CHRDL2-203ENST00000376332 ABCC9O60706 1549 aa38.86■■■■□ 3.81
CHRDL2-203ENST00000376332 DCAF1Q9Y4B6 1507 aa38.57■■■■□ 3.77
CHRDL2-203ENST00000376332 MYO15BQ96JP2 1530 aa38.18■■■■□ 3.7
CHRDL2-203ENST00000376332 SHROOM4Q9ULL8 1493 aa38.12■■■■□ 3.69
CHRDL2-203ENST00000376332 NACADO15069 1562 aa38.08■■■■□ 3.69
CHRDL2-203ENST00000376332 RB1CC1Q8TDY2 1594 aa37.82■■■■□ 3.65
CHRDL2-203ENST00000376332 SCRIBQ14160 1630 aa37.56■■■■□ 3.6
CHRDL2-203ENST00000376332 UNC13AQ9UPW8 1703 aa36.98■■■■□ 3.51
CHRDL2-203ENST00000376332 PABPN1Q86U42 306 aaKnown RBP eCLIP36.69■■■■□ 3.46
CHRDL2-203ENST00000376332 SUPT5HO00267 1087 aaKnown RBP36.65■■■■□ 3.46
CHRDL2-203ENST00000376332 BICRAQ9NZM4 1560 aa36.61■■■■□ 3.45
CHRDL2-203ENST00000376332 CECR2Q9BXF3 1484 aa36.34■■■■□ 3.41
CHRDL2-203ENST00000376332 RSF1Q96T23 1441 aaPredicted RBP36.19■■■■□ 3.38
CHRDL2-203ENST00000376332 BAZ1AQ9NRL2 1556 aaPredicted RBP36.11■■■■□ 3.37
CHRDL2-203ENST00000376332 MROH2BQ7Z745 1585 aa36.09■■■■□ 3.37
CHRDL2-203ENST00000376332 SMARCA4P51532 1647 aa35.94■■■■□ 3.34
CHRDL2-203ENST00000376332 WIZO95785 1651 aa35.8■■■■□ 3.32
CHRDL2-203ENST00000376332 EIF4G1Q04637 1599 aaKnown RBP35.57■■■■□ 3.29
CHRDL2-203ENST00000376332 PEG3Q9GZU2 1588 aa35.46■■■■□ 3.27
CHRDL2-203ENST00000376332 ATAD2BQ9ULI0 1458 aa35.43■■■■□ 3.26
CHRDL2-203ENST00000376332 SMARCA2P51531 1590 aa35.41■■■■□ 3.26
CHRDL2-203ENST00000376332 TOP2AP11388 1531 aaKnown RBP35.4■■■■□ 3.26
CHRDL2-203ENST00000376332 BAZ1BQ9UIG0 1483 aaKnown RBP35.26■■■■□ 3.23
CHRDL2-203ENST00000376332 NCAPD3P42695 1498 aa35.15■■■■□ 3.22
CHRDL2-203ENST00000376332 CC2D2AQ9P2K1 1620 aa35.12■■■■□ 3.21
CHRDL2-203ENST00000376332 CCDC88BA6NC98 1476 aa35.08■■■■□ 3.21
CHRDL2-203ENST00000376332 HMGXB3Q12766 1538 aa35.04■■■■□ 3.2
CHRDL2-203ENST00000376332 CHIC1Q5VXU3 224 aa34.88■■■■□ 3.17
CHRDL2-203ENST00000376332 TRIM41Q8WV44 630 aa34.46■■■■□ 3.11
CHRDL2-203ENST00000376332 DNAJC5BQ9UF47 199 aa34.45■■■■□ 3.11
CHRDL2-203ENST00000376332 CFTRP13569 1480 aa34.32■■■■□ 3.08
CHRDL2-203ENST00000376332 CADPSQ9ULU8 1353 aa34.28■■■■□ 3.08
CHRDL2-203ENST00000376332 ABCC8Q09428 1581 aa34.28■■■■□ 3.08
CHRDL2-203ENST00000376332 WRNQ14191 1432 aaPredicted RBP eCLIP34.11■■■■□ 3.05
CHRDL2-203ENST00000376332 PRDM2Q13029 1718 aa34.07■■■■□ 3.04
CHRDL2-203ENST00000376332 NESP48681 1621 aa34.03■■■■□ 3.04
CHRDL2-203ENST00000376332 LAMC3Q9Y6N6 1575 aa33.99■■■■□ 3.03
CHRDL2-203ENST00000376332 SYNJ1O43426 1573 aa33.91■■■■□ 3.02
CHRDL2-203ENST00000376332 FANCD2Q9BXW9 1451 aa33.9■■■■□ 3.02
CHRDL2-203ENST00000376332 FAM9AQ8IZU1 332 aaPredicted RBP33.86■■■■□ 3.01
CHRDL2-203ENST00000376332 PDS5BQ9NTI5 1447 aa33.8■■■■□ 3
CHRDL2-203ENST00000376332 TOP2BQ02880 1626 aa33.79■■■■□ 3
CHRDL2-203ENST00000376332 CUX1P39880 1505 aa33.75■■■□□ 2.99
CHRDL2-203ENST00000376332 BIVM-ERCC5R4GMW8 1640 aa33.74■■■□□ 2.99
CHRDL2-203ENST00000376332 CEP164Q9UPV0 1460 aa33.7■■■□□ 2.99
CHRDL2-203ENST00000376332 SOGA1O94964 1423 aa33.62■■■□□ 2.97
CHRDL2-203ENST00000376332 LOC105371045A0A1W2PR82 267 aa33.61■■■□□ 2.97
CHRDL2-203ENST00000376332 KIF21AQ7Z4S6 1674 aa33.58■■■□□ 2.97
CHRDL2-203ENST00000376332 DNMBPQ6XZF7 1577 aa33.52■■■□□ 2.96
CHRDL2-203ENST00000376332 EEA1Q15075 1411 aa33.51■■■□□ 2.95
CHRDL2-203ENST00000376332 RUSC2Q8N2Y8 1516 aa33.49■■■□□ 2.95
CHRDL2-203ENST00000376332 TOPBP1Q92547 1522 aa33.49■■■□□ 2.95
CHRDL2-203ENST00000376332 FGD5Q6ZNL6 1462 aa33.45■■■□□ 2.95
CHRDL2-203ENST00000376332 URB2Q14146 1524 aaKnown RBP33.45■■■□□ 2.94
CHRDL2-203ENST00000376332 CSRNP3Q8WYN3 585 aa33.43■■■□□ 2.94
CHRDL2-203ENST00000376332 EHMT2Q96KQ7 1210 aa33.43■■■□□ 2.94
CHRDL2-203ENST00000376332 ERCC6Q03468 1493 aa33.39■■■□□ 2.94
CHRDL2-203ENST00000376332 MRC2Q9UBG0 1479 aa33.33■■■□□ 2.93
CHRDL2-203ENST00000376332 POLA1P09884 1462 aaPredicted RBP33.3■■■□□ 2.92
CHRDL2-203ENST00000376332 KIF27Q86VH2 1401 aa33.29■■■□□ 2.92
CHRDL2-203ENST00000376332 CUX2O14529 1486 aa33.23■■■□□ 2.91
CHRDL2-203ENST00000376332 RAD54L2Q9Y4B4 1467 aa33.23■■■□□ 2.91
CHRDL2-203ENST00000376332 ABCA10Q8WWZ4 1543 aa33.12■■■□□ 2.89
CHRDL2-203ENST00000376332 WDR62O43379 1518 aa33.11■■■□□ 2.89
CHRDL2-203ENST00000376332 UBTFP17480 764 aaKnown RBP33.06■■■□□ 2.88
CHRDL2-203ENST00000376332 GOLGA3Q08378 1498 aa33.05■■■□□ 2.88
CHRDL2-203ENST00000376332 THOC2Q8NI27 1593 aaKnown RBP33.03■■■□□ 2.88
CHRDL2-203ENST00000376332 KIF21BO75037 1637 aa33.03■■■□□ 2.88
CHRDL2-203ENST00000376332 IGF1RP08069 1367 aa32.99■■■□□ 2.87
CHRDL2-203ENST00000376332 TDRD9Q8NDG6 1382 aaKnown RBP32.97■■■□□ 2.87
CHRDL2-203ENST00000376332 WDR97A6NE52 1622 aa32.96■■■□□ 2.87
CHRDL2-203ENST00000376332 TARBP1Q13395 1621 aaKnown RBP32.96■■■□□ 2.87
CHRDL2-203ENST00000376332 PRXQ9BXM0 1461 aa32.93■■■□□ 2.86
CHRDL2-203ENST00000376332 RAPGEF2Q9Y4G8 1499 aa32.93■■■□□ 2.86
CHRDL2-203ENST00000376332 TNIKQ9UKE5 1360 aa32.91■■■□□ 2.86
CHRDL2-203ENST00000376332 IFT140Q96RY7 1462 aa32.9■■■□□ 2.86
CHRDL2-203ENST00000376332 GAPVD1Q14C86 1478 aa32.87■■■□□ 2.85
CHRDL2-203ENST00000376332 CARMIL1Q5VZK9 1371 aa32.85■■■□□ 2.85
CHRDL2-203ENST00000376332 ERICH3Q5RHP9 1530 aa32.85■■■□□ 2.85
CHRDL2-203ENST00000376332 ABCA5Q8WWZ7 1642 aa32.83■■■□□ 2.85
CHRDL2-203ENST00000376332 AQRO60306 1485 aaKnown RBP eCLIP32.77■■■□□ 2.84
CHRDL2-203ENST00000376332 ZNF608Q9ULD9 1512 aaPredicted RBP32.72■■■□□ 2.83
CHRDL2-203ENST00000376332 CEP162Q5TB80 1403 aa32.71■■■□□ 2.83
CHRDL2-203ENST00000376332 CUL7Q14999 1698 aa32.7■■■□□ 2.83
CHRDL2-203ENST00000376332 GRIN2BQ13224 1484 aa32.63■■■□□ 2.81
CHRDL2-203ENST00000376332 PBRM1Q86U86 1689 aa32.63■■■□□ 2.81
CHRDL2-203ENST00000376332 RANGAP1P46060 587 aaPredicted RBP32.63■■■□□ 2.81
CHRDL2-203ENST00000376332 EIF4G3O43432 1585 aaKnown RBP32.57■■■□□ 2.8
CHRDL2-203ENST00000376332 CLIP1P30622 1438 aa32.53■■■□□ 2.8
CHRDL2-203ENST00000376332 FHAD1B1AJZ9 1412 aa32.5■■■□□ 2.79
CHRDL2-203ENST00000376332 SNAPC4Q5SXM2 1469 aa32.43■■■□□ 2.78
CHRDL2-203ENST00000376332 ADAMTS12P58397 1594 aa32.43■■■□□ 2.78
CHRDL2-203ENST00000376332 MAGI1Q96QZ7 1491 aaPredicted RBP32.35■■■□□ 2.77
CHRDL2-203ENST00000376332 CHMP7Q8WUX9 453 aaPredicted RBP32.31■■■□□ 2.76
CHRDL2-203ENST00000376332 CTTNBP2Q8WZ74 1663 aa32.3■■■□□ 2.76
CHRDL2-203ENST00000376332 FBLN2P98095 1184 aa32.29■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 185 ms