RNA–Protein interactions for RNA: ENST00000479408.6

PDE4DIP-214, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 5 BASIC

Gene PDE4DIP, Length 2,746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-214ENST00000479408 NISCHQ9Y2I1 1504 aa40.52■■■■■ 4.08
PDE4DIP-214ENST00000479408 SHROOM4Q9ULL8 1493 aa34.9■■■■□ 3.18
PDE4DIP-214ENST00000479408 CCDC180Q9P1Z9 1646 aa34.26■■■■□ 3.08
PDE4DIP-214ENST00000479408 ZCCHC6Q5VYS8 1495 aaKnown RBP34.26■■■■□ 3.08
PDE4DIP-214ENST00000479408 SUPT5HO00267 1087 aaKnown RBP34.23■■■■□ 3.07
PDE4DIP-214ENST00000479408 DCAF8L2P0C7V8 631 aa33.93■■■■□ 3.02
PDE4DIP-214ENST00000479408 CHIC1Q5VXU3 224 aa33.19■■■□□ 2.9
PDE4DIP-214ENST00000479408 MYO15BQ96JP2 1530 aa33.11■■■□□ 2.89
PDE4DIP-214ENST00000479408 DCAF1Q9Y4B6 1507 aa33.08■■■□□ 2.89
PDE4DIP-214ENST00000479408 SCRIBQ14160 1630 aa32.38■■■□□ 2.77
PDE4DIP-214ENST00000479408 LOC105371045A0A1W2PR82 267 aa32.35■■■□□ 2.77
PDE4DIP-214ENST00000479408 ABCC9O60706 1549 aa32.32■■■□□ 2.76
PDE4DIP-214ENST00000479408 PCGF6Q9BYE7 350 aa32.3■■■□□ 2.76
PDE4DIP-214ENST00000479408 HRCP23327 699 aa32.2■■■□□ 2.75
PDE4DIP-214ENST00000479408 RSF1Q96T23 1441 aaPredicted RBP32.16■■■□□ 2.74
PDE4DIP-214ENST00000479408 RB1CC1Q8TDY2 1594 aa31.85■■■□□ 2.69
PDE4DIP-214ENST00000479408 TRIM41Q8WV44 630 aa31.77■■■□□ 2.68
PDE4DIP-214ENST00000479408 CECR2Q9BXF3 1484 aa31.76■■■□□ 2.67
PDE4DIP-214ENST00000479408 PPARGC1BQ86YN6 1023 aaKnown RBP31.75■■■□□ 2.67
PDE4DIP-214ENST00000479408 NACADO15069 1562 aa31.72■■■□□ 2.67
PDE4DIP-214ENST00000479408 FAM9AQ8IZU1 332 aaPredicted RBP31.68■■■□□ 2.66
PDE4DIP-214ENST00000479408 MROH2BQ7Z745 1585 aa31.6■■■□□ 2.65
PDE4DIP-214ENST00000479408 EHMT2Q96KQ7 1210 aa31.54■■■□□ 2.64
PDE4DIP-214ENST00000479408 TRIM26Q12899 539 aaPredicted RBP31.52■■■□□ 2.64
PDE4DIP-214ENST00000479408 WIZO95785 1651 aa31.44■■■□□ 2.62
PDE4DIP-214ENST00000479408 BAZ1AQ9NRL2 1556 aaPredicted RBP31.1■■■□□ 2.57
PDE4DIP-214ENST00000479408 EIF4G1Q04637 1599 aaKnown RBP30.91■■■□□ 2.54
PDE4DIP-214ENST00000479408 UNC13AQ9UPW8 1703 aa30.86■■■□□ 2.53
PDE4DIP-214ENST00000479408 SMARCA4P51532 1647 aa30.84■■■□□ 2.53
PDE4DIP-214ENST00000479408 TOP2AP11388 1531 aaKnown RBP30.81■■■□□ 2.52
PDE4DIP-214ENST00000479408 ABCC8Q09428 1581 aa30.81■■■□□ 2.52
PDE4DIP-214ENST00000479408 CCDC88BA6NC98 1476 aa30.8■■■□□ 2.52
PDE4DIP-214ENST00000479408 PABPN1Q86U42 306 aaKnown RBP eCLIP30.75■■■□□ 2.51
PDE4DIP-214ENST00000479408 ZEB1P37275 1124 aaPredicted RBP30.71■■■□□ 2.51
PDE4DIP-214ENST00000479408 SMARCA2P51531 1590 aa30.7■■■□□ 2.51
PDE4DIP-214ENST00000479408 SOGA1O94964 1423 aa30.54■■■□□ 2.48
PDE4DIP-214ENST00000479408 TTBK1Q5TCY1 1321 aaPredicted RBP30.49■■■□□ 2.47
PDE4DIP-214ENST00000479408 BICRAQ9NZM4 1560 aa30.48■■■□□ 2.47
PDE4DIP-214ENST00000479408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.43■■■□□ 2.46
PDE4DIP-214ENST00000479408 RUSC2Q8N2Y8 1516 aa30.42■■■□□ 2.46
PDE4DIP-214ENST00000479408 CEP162Q5TB80 1403 aa30.35■■■□□ 2.45
PDE4DIP-214ENST00000479408 CSRNP3Q8WYN3 585 aa30.32■■■□□ 2.44
PDE4DIP-214ENST00000479408 UBTFP17480 764 aaKnown RBP30.29■■■□□ 2.44
PDE4DIP-214ENST00000479408 CCER1Q8TC90 406 aaPredicted RBP30.25■■■□□ 2.43
PDE4DIP-214ENST00000479408 TNIKQ9UKE5 1360 aa30.23■■■□□ 2.43
PDE4DIP-214ENST00000479408 WRNQ14191 1432 aaPredicted RBP eCLIP30.2■■■□□ 2.431e-7■■■■■ 66.8
PDE4DIP-214ENST00000479408 PEG3Q9GZU2 1588 aa30.15■■■□□ 2.42
PDE4DIP-214ENST00000479408 EEA1Q15075 1411 aa30.13■■■□□ 2.41
PDE4DIP-214ENST00000479408 ATAD2BQ9ULI0 1458 aa30.08■■■□□ 2.41
PDE4DIP-214ENST00000479408 SYNJ1O43426 1573 aa30.06■■■□□ 2.4
PDE4DIP-214ENST00000479408 GOLGA3Q08378 1498 aa30.04■■■□□ 2.4
PDE4DIP-214ENST00000479408 BAZ1BQ9UIG0 1483 aaKnown RBP30■■■□□ 2.39
PDE4DIP-214ENST00000479408 RANGAP1P46060 587 aaPredicted RBP29.86■■■□□ 2.37
PDE4DIP-214ENST00000479408 CEP164Q9UPV0 1460 aa29.85■■■□□ 2.37
PDE4DIP-214ENST00000479408 SCAF1Q9H7N4 1312 aaKnown RBP29.77■■■□□ 2.36
PDE4DIP-214ENST00000479408 CLIP1P30622 1438 aa29.77■■■□□ 2.36
PDE4DIP-214ENST00000479408 KIF21BO75037 1637 aa29.76■■■□□ 2.35
PDE4DIP-214ENST00000479408 RAPGEF2Q9Y4G8 1499 aa29.76■■■□□ 2.35
PDE4DIP-214ENST00000479408 HNRNPUL2Q1KMD3 747 aaKnown RBP29.71■■■□□ 2.35
PDE4DIP-214ENST00000479408 DIEXFQ68CQ4 756 aaKnown RBP29.66■■■□□ 2.34
PDE4DIP-214ENST00000479408 VPS8Q8N3P4 1428 aa29.6■■■□□ 2.33
PDE4DIP-214ENST00000479408 TOP2BQ02880 1626 aa29.59■■■□□ 2.33
PDE4DIP-214ENST00000479408 APLP2Q06481 763 aa29.53■■■□□ 2.32
PDE4DIP-214ENST00000479408 NEUROD1Q13562 356 aa29.46■■■□□ 2.31
PDE4DIP-214ENST00000479408 BIVM-ERCC5R4GMW8 1640 aa29.44■■■□□ 2.3
PDE4DIP-214ENST00000479408 NCAPD3P42695 1498 aa29.42■■■□□ 2.3
PDE4DIP-214ENST00000479408 ACIN1Q9UKV3 1341 aaKnown RBP29.4■■■□□ 2.3
PDE4DIP-214ENST00000479408 ZNF316A6NFI3 1004 aaPredicted RBP29.39■■■□□ 2.3
PDE4DIP-214ENST00000479408 CUX1P39880 1505 aa29.38■■■□□ 2.29
PDE4DIP-214ENST00000479408 PRXQ9BXM0 1461 aa29.36■■■□□ 2.29
PDE4DIP-214ENST00000479408 HMGXB3Q12766 1538 aa29.36■■■□□ 2.29
PDE4DIP-214ENST00000479408 ARAP1Q96P48 1450 aa29.27■■■□□ 2.28
PDE4DIP-214ENST00000479408 KANK4Q5T7N3 995 aaPredicted RBP29.27■■■□□ 2.28
PDE4DIP-214ENST00000479408 ERICH3Q5RHP9 1530 aa29.26■■■□□ 2.28
PDE4DIP-214ENST00000479408 CFTRP13569 1480 aa29.23■■■□□ 2.27
PDE4DIP-214ENST00000479408 KIF27Q86VH2 1401 aa29.22■■■□□ 2.27
PDE4DIP-214ENST00000479408 CENPBP07199 599 aaPredicted RBP29.15■■■□□ 2.26
PDE4DIP-214ENST00000479408 GTF3C3Q9Y5Q9 886 aa29.14■■■□□ 2.26
PDE4DIP-214ENST00000479408 YTHDC1Q96MU7 727 aaKnown RBP29.1■■■□□ 2.25
PDE4DIP-214ENST00000479408 MIER1Q8N108 512 aa29.08■■■□□ 2.25
PDE4DIP-214ENST00000479408 ARHGAP35Q9NRY4 1499 aa29.03■■■□□ 2.24
PDE4DIP-214ENST00000479408 CUX2O14529 1486 aa29■■■□□ 2.23
PDE4DIP-214ENST00000479408 DHX57Q6P158 1386 aaKnown RBP28.99■■■□□ 2.23
PDE4DIP-214ENST00000479408 IGF1RP08069 1367 aa28.97■■■□□ 2.23
PDE4DIP-214ENST00000479408 ITGAEP38570 1179 aa28.95■■■□□ 2.23
PDE4DIP-214ENST00000479408 CADPSQ9ULU8 1353 aa28.93■■■□□ 2.22
PDE4DIP-214ENST00000479408 RRBP1Q9P2E9 1410 aaKnown RBP28.89■■■□□ 2.22
PDE4DIP-214ENST00000479408 FGD5Q6ZNL6 1462 aa28.86■■■□□ 2.21
PDE4DIP-214ENST00000479408 PRDM2Q13029 1718 aa28.86■■■□□ 2.21
PDE4DIP-214ENST00000479408 PELP1Q8IZL8 1130 aaKnown RBP28.85■■■□□ 2.21
PDE4DIP-214ENST00000479408 CARMIL1Q5VZK9 1371 aa28.83■■■□□ 2.21
PDE4DIP-214ENST00000479408 CCNB3Q8WWL7 1395 aa28.83■■■□□ 2.21
PDE4DIP-214ENST00000479408 CLSPNQ9HAW4 1339 aa28.79■■■□□ 2.2
PDE4DIP-214ENST00000479408 P3H3Q8IVL6 736 aa28.78■■■□□ 2.2
PDE4DIP-214ENST00000479408 CC2D2AQ9P2K1 1620 aa28.73■■■□□ 2.19
PDE4DIP-214ENST00000479408 ATP1B4Q9UN42 357 aaPredicted RBP28.67■■■□□ 2.18
PDE4DIP-214ENST00000479408 FANCD2Q9BXW9 1451 aa28.67■■■□□ 2.18
PDE4DIP-214ENST00000479408 TIAM1Q13009 1591 aa28.65■■■□□ 2.18
PDE4DIP-214ENST00000479408 RAD54L2Q9Y4B4 1467 aa28.65■■■□□ 2.18
PDE4DIP-214ENST00000479408 RAB3GAP2Q9H2M9 1393 aa28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms