Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CDH20Q9HBT6 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 KRT18P11-201ENST00000435214 1283 ntBASIC18.19■□□□□ 0.5
CDH20Q9HBT6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 AC061975.6-201ENST00000579045 1553 ntBASIC18.19■□□□□ 0.5
CDH20Q9HBT6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.19■□□□□ 0.5
CDH20Q9HBT6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 SLC25A24-204ENST00000569674 2357 ntBASIC18.18■□□□□ 0.5
CDH20Q9HBT6 Z98882.1-201ENST00000622160 2253 ntBASIC18.18■□□□□ 0.5
CDH20Q9HBT6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 AC022517.1-201ENST00000592429 346 ntBASIC18.18■□□□□ 0.5
CDH20Q9HBT6 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.18■□□□□ 0.5
CDH20Q9HBT6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CDH20Q9HBT6 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 KRT16P2-201ENST00000414673 1423 ntBASIC18.17■□□□□ 0.5
CDH20Q9HBT6 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 UBE2DNL-204ENST00000602536 740 ntBASIC18.17■□□□□ 0.5
CDH20Q9HBT6 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
CDH20Q9HBT6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 SLC7A5P2-201ENST00000553010 536 ntBASIC18.16■□□□□ 0.5
CDH20Q9HBT6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 AL137784.2-201ENST00000607332 1000 ntBASIC18.16■□□□□ 0.5
CDH20Q9HBT6 MYCNOS-205ENST00000641950 531 ntBASIC18.16■□□□□ 0.5
CDH20Q9HBT6 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC18.16■□□□□ 0.5
CDH20Q9HBT6 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms