RNA–Protein interactions for RNA: ENST00000568794.5

COX4I1-216, Transcript of cytochrome c oxidase subunit 4I1, humanhuman

TSL 5 BASIC

Gene COX4I1, Length 794 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I1-216ENST00000568794 NISCHQ9Y2I1 1504 aa52.4■■■■■ 5.98
COX4I1-216ENST00000568794 CCDC180Q9P1Z9 1646 aa46.84■■■■■ 5.09
COX4I1-216ENST00000568794 ABCC9O60706 1549 aa46.45■■■■■ 5.03
COX4I1-216ENST00000568794 RB1CC1Q8TDY2 1594 aa44.33■■■■■ 4.69
COX4I1-216ENST00000568794 NACADO15069 1562 aa44.11■■■■■ 4.65
COX4I1-216ENST00000568794 DCAF8L2P0C7V8 631 aa44.1■■■■■ 4.65
COX4I1-216ENST00000568794 MYO15BQ96JP2 1530 aa43.57■■■■■ 4.56
COX4I1-216ENST00000568794 UNC13AQ9UPW8 1703 aa43.56■■■■■ 4.56
COX4I1-216ENST00000568794 ZCCHC6Q5VYS8 1495 aaKnown RBP43.55■■■■■ 4.56
COX4I1-216ENST00000568794 PABPN1Q86U42 306 aaKnown RBP eCLIP43.32■■■■■ 4.53
COX4I1-216ENST00000568794 DCAF1Q9Y4B6 1507 aa43.22■■■■■ 4.51
COX4I1-216ENST00000568794 DNAJC5BQ9UF47 199 aa43.13■■■■■ 4.49
COX4I1-216ENST00000568794 BICRAQ9NZM4 1560 aa43.1■■■■■ 4.49
COX4I1-216ENST00000568794 SCRIBQ14160 1630 aa42.84■■■■■ 4.45
COX4I1-216ENST00000568794 SHROOM4Q9ULL8 1493 aa42.36■■■■■ 4.37
COX4I1-216ENST00000568794 CC2D2AQ9P2K1 1620 aa41.98■■■■■ 4.31
COX4I1-216ENST00000568794 EIF4G1Q04637 1599 aaKnown RBP41.97■■■■■ 4.31
COX4I1-216ENST00000568794 CECR2Q9BXF3 1484 aa41.72■■■■■ 4.27
COX4I1-216ENST00000568794 SMARCA4P51532 1647 aa40.84■■■■■ 4.13
COX4I1-216ENST00000568794 ATAD2BQ9ULI0 1458 aa40.7■■■■■ 4.11
COX4I1-216ENST00000568794 NCAPD3P42695 1498 aa40.68■■■■■ 4.1
COX4I1-216ENST00000568794 BAZ1AQ9NRL2 1556 aaPredicted RBP40.63■■■■■ 4.09
COX4I1-216ENST00000568794 SMARCA2P51531 1590 aa40.59■■■■■ 4.09
COX4I1-216ENST00000568794 HMGXB3Q12766 1538 aa40.47■■■■■ 4.07
COX4I1-216ENST00000568794 MROH2BQ7Z745 1585 aa40.45■■■■■ 4.07
COX4I1-216ENST00000568794 BAZ1BQ9UIG0 1483 aaKnown RBP40.35■■■■■ 4.05
COX4I1-216ENST00000568794 PEG3Q9GZU2 1588 aa40.35■■■■■ 4.05
COX4I1-216ENST00000568794 NESP48681 1621 aa40.07■■■■■ 4.01
COX4I1-216ENST00000568794 WIZO95785 1651 aa40.07■■■■■ 4
COX4I1-216ENST00000568794 ERCC6Q03468 1493 aa40.02■■■■■ 4
COX4I1-216ENST00000568794 LAMC3Q9Y6N6 1575 aa39.75■■■■□ 3.95
COX4I1-216ENST00000568794 RSF1Q96T23 1441 aaPredicted RBP39.74■■■■□ 3.95
COX4I1-216ENST00000568794 CUX2O14529 1486 aa39.7■■■■□ 3.95
COX4I1-216ENST00000568794 KIF21AQ7Z4S6 1674 aa39.63■■■■□ 3.93
COX4I1-216ENST00000568794 THOC2Q8NI27 1593 aaKnown RBP39.55■■■■□ 3.92
COX4I1-216ENST00000568794 CADPSQ9ULU8 1353 aa39.49■■■■□ 3.91
COX4I1-216ENST00000568794 TOP2AP11388 1531 aaKnown RBP39.49■■■■□ 3.91
COX4I1-216ENST00000568794 PDS5BQ9NTI5 1447 aa39.45■■■■□ 3.91
COX4I1-216ENST00000568794 CFTRP13569 1480 aa39.15■■■■□ 3.86
COX4I1-216ENST00000568794 MRC2Q9UBG0 1479 aa39.15■■■■□ 3.86
COX4I1-216ENST00000568794 DNAJC5Q9H3Z4 198 aa39.13■■■■□ 3.85
COX4I1-216ENST00000568794 FANCD2Q9BXW9 1451 aa39.11■■■■□ 3.85
COX4I1-216ENST00000568794 CEP164Q9UPV0 1460 aa39.1■■■■□ 3.85
COX4I1-216ENST00000568794 WDR62O43379 1518 aa39.04■■■■□ 3.84
COX4I1-216ENST00000568794 CCDC88BA6NC98 1476 aa39.04■■■■□ 3.84
COX4I1-216ENST00000568794 PRDM2Q13029 1718 aa38.98■■■■□ 3.83
COX4I1-216ENST00000568794 URB2Q14146 1524 aaKnown RBP38.79■■■■□ 3.8
COX4I1-216ENST00000568794 TOPBP1Q92547 1522 aa38.43■■■■□ 3.74
COX4I1-216ENST00000568794 SUPT5HO00267 1087 aaKnown RBP38.42■■■■□ 3.74
COX4I1-216ENST00000568794 DNMBPQ6XZF7 1577 aa38.33■■■■□ 3.73
COX4I1-216ENST00000568794 IFT140Q96RY7 1462 aa38.26■■■■□ 3.72
COX4I1-216ENST00000568794 ZNF608Q9ULD9 1512 aaPredicted RBP38.26■■■■□ 3.72
COX4I1-216ENST00000568794 ABCC8Q09428 1581 aa38.26■■■■□ 3.72
COX4I1-216ENST00000568794 EIF4G3O43432 1585 aaKnown RBP38.09■■■■□ 3.69
COX4I1-216ENST00000568794 TARBP1Q13395 1621 aaKnown RBP38.09■■■■□ 3.69
COX4I1-216ENST00000568794 POLA1P09884 1462 aaPredicted RBP38.07■■■■□ 3.68
COX4I1-216ENST00000568794 CUX1P39880 1505 aa37.98■■■■□ 3.67
COX4I1-216ENST00000568794 RAD54L2Q9Y4B4 1467 aa37.97■■■■□ 3.67
COX4I1-216ENST00000568794 OSCARQ8IYS5 282 aa37.96■■■■□ 3.67
COX4I1-216ENST00000568794 AQRO60306 1485 aaKnown RBP eCLIP37.95■■■■□ 3.676e-9■■■■■ 43.9
COX4I1-216ENST00000568794 FGD5Q6ZNL6 1462 aa37.92■■■■□ 3.66
COX4I1-216ENST00000568794 SOGA1O94964 1423 aa37.87■■■■□ 3.65
COX4I1-216ENST00000568794 CHD1O14646 1710 aa37.79■■■■□ 3.64
COX4I1-216ENST00000568794 TDRD9Q8NDG6 1382 aaKnown RBP37.78■■■■□ 3.64
COX4I1-216ENST00000568794 TRIM41Q8WV44 630 aa37.76■■■■□ 3.64
COX4I1-216ENST00000568794 WDR97A6NE52 1622 aa37.69■■■■□ 3.62
COX4I1-216ENST00000568794 FBLN2P98095 1184 aa37.6■■■■□ 3.61
COX4I1-216ENST00000568794 SNAPC4Q5SXM2 1469 aa37.58■■■■□ 3.61
COX4I1-216ENST00000568794 RIMBP3CA6NJZ7 1639 aa37.58■■■■□ 3.61
COX4I1-216ENST00000568794 RIMBP3BA6NNM3 1639 aa37.58■■■■□ 3.61
COX4I1-216ENST00000568794 RIMBP3Q9UFD9 1639 aa37.58■■■■□ 3.61
COX4I1-216ENST00000568794 PBRM1Q86U86 1689 aa37.53■■■■□ 3.6
COX4I1-216ENST00000568794 SYNJ1O43426 1573 aa37.51■■■■□ 3.6
COX4I1-216ENST00000568794 BIVM-ERCC5R4GMW8 1640 aa37.5■■■■□ 3.59
COX4I1-216ENST00000568794 TOP2BQ02880 1626 aa37.47■■■■□ 3.59
COX4I1-216ENST00000568794 GRIN2BQ13224 1484 aa37.47■■■■□ 3.59
COX4I1-216ENST00000568794 WRNQ14191 1432 aaPredicted RBP eCLIP37.47■■■■□ 3.591e-6■□□□□ 10.2
COX4I1-216ENST00000568794 ABCA10Q8WWZ4 1543 aa37.46■■■■□ 3.59
COX4I1-216ENST00000568794 ARHGEF11O15085 1522 aa37.45■■■■□ 3.59
COX4I1-216ENST00000568794 GAPVD1Q14C86 1478 aa37.44■■■■□ 3.58
COX4I1-216ENST00000568794 ABCA5Q8WWZ7 1642 aa37.43■■■■□ 3.58
COX4I1-216ENST00000568794 MAGI1Q96QZ7 1491 aaPredicted RBP37.42■■■■□ 3.58
COX4I1-216ENST00000568794 CHMP7Q8WUX9 453 aaPredicted RBP37.33■■■■□ 3.57
COX4I1-216ENST00000568794 SYNJ2O15056 1496 aa37.3■■■■□ 3.56
COX4I1-216ENST00000568794 CLASP1Q7Z460 1538 aa37.24■■■■□ 3.55
COX4I1-216ENST00000568794 CYB5RLQ6IPT4 315 aa37.13■■■■□ 3.53
COX4I1-216ENST00000568794 ARAP1Q96P48 1450 aa37.13■■■■□ 3.53
COX4I1-216ENST00000568794 ADAMTS12P58397 1594 aa37.12■■■■□ 3.53
COX4I1-216ENST00000568794 GRIN2AQ12879 1464 aa37.02■■■■□ 3.52
COX4I1-216ENST00000568794 ERICH3Q5RHP9 1530 aa36.99■■■■□ 3.51
COX4I1-216ENST00000568794 FHAD1B1AJZ9 1412 aa36.94■■■■□ 3.5
COX4I1-216ENST00000568794 CEP170Q5SW79 1584 aa36.94■■■■□ 3.5
COX4I1-216ENST00000568794 NUP160Q12769 1436 aa36.85■■■■□ 3.49
COX4I1-216ENST00000568794 ERCC6L2Q5T890 1561 aa36.79■■■■□ 3.48
COX4I1-216ENST00000568794 SHROOM2Q13796 1616 aa36.7■■■■□ 3.47
COX4I1-216ENST00000568794 KIF27Q86VH2 1401 aa36.68■■■■□ 3.46
COX4I1-216ENST00000568794 IGF1RP08069 1367 aa36.63■■■■□ 3.45
COX4I1-216ENST00000568794 CUL7Q14999 1698 aa36.6■■■■□ 3.45
COX4I1-216ENST00000568794 RUSC2Q8N2Y8 1516 aa36.59■■■■□ 3.45
COX4I1-216ENST00000568794 TRHP20396 242 aaPredicted RBP36.57■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms