Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 TNRC18P3-201ENST00000441896 2691 ntBASIC14.65□□□□□ -0.06
VPS25Q9BRG1 COMT-203ENST00000403184 2217 ntTSL 2 BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
VPS25Q9BRG1 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.07
VPS25Q9BRG1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 AC112907.3-201ENST00000577781 2400 ntBASIC14.64□□□□□ -0.07
VPS25Q9BRG1 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC14.64□□□□□ -0.07
VPS25Q9BRG1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 AP000997.3-201ENST00000623333 2250 ntBASIC14.63□□□□□ -0.07
VPS25Q9BRG1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
VPS25Q9BRG1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 AC135983.2-203ENST00000454486 1613 ntBASIC14.62□□□□□ -0.07
VPS25Q9BRG1 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
VPS25Q9BRG1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
VPS25Q9BRG1 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms