RNA–Protein interactions for RNA: ENST00000392302.6

NTRK1-203, Transcript of neurotrophic receptor tyrosine kinase 1, humanhuman

TSL 5 BASIC

Gene NTRK1, Length 2,609 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK1-203ENST00000392302 NISCHQ9Y2I1 1504 aa35.41■■■■□ 3.26
NTRK1-203ENST00000392302 SHROOM4Q9ULL8 1493 aa30.76■■■□□ 2.51
NTRK1-203ENST00000392302 SUPT5HO00267 1087 aaKnown RBP30.5■■■□□ 2.47
NTRK1-203ENST00000392302 HRCP23327 699 aa30.2■■■□□ 2.42
NTRK1-203ENST00000392302 ZCCHC6Q5VYS8 1495 aaKnown RBP30.07■■■□□ 2.4
NTRK1-203ENST00000392302 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
NTRK1-203ENST00000392302 CHIC1Q5VXU3 224 aa29.92■■■□□ 2.38
NTRK1-203ENST00000392302 CCDC180Q9P1Z9 1646 aa29.79■■■□□ 2.36
NTRK1-203ENST00000392302 PCGF6Q9BYE7 350 aa29.75■■■□□ 2.35
NTRK1-203ENST00000392302 PPARGC1BQ86YN6 1023 aaKnown RBP29.43■■■□□ 2.3
NTRK1-203ENST00000392302 DCAF1Q9Y4B6 1507 aa29.4■■■□□ 2.3
NTRK1-203ENST00000392302 DCAF8L2P0C7V8 631 aa29.3■■■□□ 2.28
NTRK1-203ENST00000392302 LOC105371045A0A1W2PR82 267 aa29.08■■■□□ 2.25
NTRK1-203ENST00000392302 TRIM26Q12899 539 aaPredicted RBP29.03■■■□□ 2.24
NTRK1-203ENST00000392302 ZEB1P37275 1124 aaPredicted RBP28.73■■■□□ 2.19
NTRK1-203ENST00000392302 PELP1Q8IZL8 1130 aaKnown RBP28.6■■■□□ 2.17
NTRK1-203ENST00000392302 ABCC9O60706 1549 aa28.53■■■□□ 2.16
NTRK1-203ENST00000392302 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
NTRK1-203ENST00000392302 RSF1Q96T23 1441 aaPredicted RBP28.28■■■□□ 2.12
NTRK1-203ENST00000392302 SCAF1Q9H7N4 1312 aaKnown RBP28.23■■■□□ 2.11
NTRK1-203ENST00000392302 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
NTRK1-203ENST00000392302 RB1CC1Q8TDY2 1594 aa28.12■■■□□ 2.09
NTRK1-203ENST00000392302 SCRIBQ14160 1630 aa28.09■■■□□ 2.09
NTRK1-203ENST00000392302 EHMT2Q96KQ7 1210 aa27.93■■■□□ 2.06
NTRK1-203ENST00000392302 ACIN1Q9UKV3 1341 aaKnown RBP27.77■■■□□ 2.04
NTRK1-203ENST00000392302 CCER1Q8TC90 406 aaPredicted RBP27.73■■■□□ 2.03
NTRK1-203ENST00000392302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.71■■■□□ 2.03
NTRK1-203ENST00000392302 NEUROD1Q13562 356 aa27.65■■■□□ 2.02
NTRK1-203ENST00000392302 CENPBP07199 599 aaPredicted RBP27.59■■■□□ 2.01
NTRK1-203ENST00000392302 CECR2Q9BXF3 1484 aa27.58■■■□□ 2.01
NTRK1-203ENST00000392302 MROH2BQ7Z745 1585 aa27.57■■■□□ 2
NTRK1-203ENST00000392302 DIEXFQ68CQ4 756 aaKnown RBP27.56■■■□□ 2
NTRK1-203ENST00000392302 WIZO95785 1651 aa27.49■■□□□ 1.99
NTRK1-203ENST00000392302 GTF3C3Q9Y5Q9 886 aa27.48■■□□□ 1.99
NTRK1-203ENST00000392302 MYT1Q01538 1121 aa27.41■■□□□ 1.98
NTRK1-203ENST00000392302 NACADO15069 1562 aa27.39■■□□□ 1.98
NTRK1-203ENST00000392302 BAZ1AQ9NRL2 1556 aaPredicted RBP27.36■■□□□ 1.97
NTRK1-203ENST00000392302 WRNQ14191 1432 aaPredicted RBP eCLIP27.35■■□□□ 1.97
NTRK1-203ENST00000392302 EIF4G1Q04637 1599 aaKnown RBP27.35■■□□□ 1.97
NTRK1-203ENST00000392302 TTBK1Q5TCY1 1321 aaPredicted RBP27.23■■□□□ 1.95
NTRK1-203ENST00000392302 CEP162Q5TB80 1403 aa27.21■■□□□ 1.95
NTRK1-203ENST00000392302 ZNF316A6NFI3 1004 aaPredicted RBP27.16■■□□□ 1.94
NTRK1-203ENST00000392302 ABCC8Q09428 1581 aa27.12■■□□□ 1.93
NTRK1-203ENST00000392302 CCDC88BA6NC98 1476 aa27.12■■□□□ 1.93
NTRK1-203ENST00000392302 TNIKQ9UKE5 1360 aa27.11■■□□□ 1.93
NTRK1-203ENST00000392302 TOP2AP11388 1531 aaKnown RBP27.04■■□□□ 1.92
NTRK1-203ENST00000392302 EEA1Q15075 1411 aa26.99■■□□□ 1.91
NTRK1-203ENST00000392302 SOGA1O94964 1423 aa26.98■■□□□ 1.91
NTRK1-203ENST00000392302 YTHDC1Q96MU7 727 aaKnown RBP26.96■■□□□ 1.91
NTRK1-203ENST00000392302 UBTFP17480 764 aaKnown RBP26.94■■□□□ 1.9
NTRK1-203ENST00000392302 CSRNP3Q8WYN3 585 aa26.93■■□□□ 1.9
NTRK1-203ENST00000392302 SMARCA2P51531 1590 aa26.91■■□□□ 1.9
NTRK1-203ENST00000392302 GOLGA3Q08378 1498 aa26.85■■□□□ 1.89
NTRK1-203ENST00000392302 SMARCA4P51532 1647 aa26.84■■□□□ 1.89
NTRK1-203ENST00000392302 MIER1Q8N108 512 aa26.83■■□□□ 1.89
NTRK1-203ENST00000392302 RUSC2Q8N2Y8 1516 aa26.8■■□□□ 1.88
NTRK1-203ENST00000392302 HNRNPUL2Q1KMD3 747 aaKnown RBP26.73■■□□□ 1.87
NTRK1-203ENST00000392302 CEP164Q9UPV0 1460 aa26.62■■□□□ 1.85
NTRK1-203ENST00000392302 KIF21BO75037 1637 aa26.58■■□□□ 1.85
NTRK1-203ENST00000392302 CLIP1P30622 1438 aa26.57■■□□□ 1.84
NTRK1-203ENST00000392302 APLP2Q06481 763 aa26.54■■□□□ 1.84
NTRK1-203ENST00000392302 VPS8Q8N3P4 1428 aa26.54■■□□□ 1.84
NTRK1-203ENST00000392302 CLSPNQ9HAW4 1339 aa26.47■■□□□ 1.83
NTRK1-203ENST00000392302 UNC13AQ9UPW8 1703 aa26.46■■□□□ 1.83
NTRK1-203ENST00000392302 BAZ1BQ9UIG0 1483 aaKnown RBP26.43■■□□□ 1.82
NTRK1-203ENST00000392302 SYNJ1O43426 1573 aa26.41■■□□□ 1.82
NTRK1-203ENST00000392302 RAPGEF2Q9Y4G8 1499 aa26.3■■□□□ 1.8
NTRK1-203ENST00000392302 SUPT16HQ9Y5B9 1047 aaKnown RBP26.29■■□□□ 1.8
NTRK1-203ENST00000392302 DHX57Q6P158 1386 aaKnown RBP26.27■■□□□ 1.8
NTRK1-203ENST00000392302 PEG3Q9GZU2 1588 aa26.25■■□□□ 1.79
NTRK1-203ENST00000392302 RANGAP1P46060 587 aaPredicted RBP26.23■■□□□ 1.79
NTRK1-203ENST00000392302 PABPN1Q86U42 306 aaKnown RBP eCLIP26.04■■□□□ 1.76
NTRK1-203ENST00000392302 BICRAQ9NZM4 1560 aa26.04■■□□□ 1.76
NTRK1-203ENST00000392302 ERICH3Q5RHP9 1530 aa26.03■■□□□ 1.76
NTRK1-203ENST00000392302 TSHZ2Q9NRE2 1034 aa26.03■■□□□ 1.76
NTRK1-203ENST00000392302 TOP2BQ02880 1626 aa26.03■■□□□ 1.76
NTRK1-203ENST00000392302 ARAP1Q96P48 1450 aa26.02■■□□□ 1.76
NTRK1-203ENST00000392302 RRBP1Q9P2E9 1410 aaKnown RBP26■■□□□ 1.75
NTRK1-203ENST00000392302 KANK4Q5T7N3 995 aaPredicted RBP25.99■■□□□ 1.75
NTRK1-203ENST00000392302 ATAD2BQ9ULI0 1458 aa25.98■■□□□ 1.75
NTRK1-203ENST00000392302 CUX2O14529 1486 aa25.96■■□□□ 1.75
NTRK1-203ENST00000392302 PRXQ9BXM0 1461 aa25.94■■□□□ 1.74
NTRK1-203ENST00000392302 ANP32EQ9BTT0 268 aa25.93■■□□□ 1.74
NTRK1-203ENST00000392302 BIVM-ERCC5R4GMW8 1640 aa25.92■■□□□ 1.74
NTRK1-203ENST00000392302 CCNB3Q8WWL7 1395 aa25.88■■□□□ 1.73
NTRK1-203ENST00000392302 KCNH8Q96L42 1107 aa25.79■■□□□ 1.72
NTRK1-203ENST00000392302 ITGAEP38570 1179 aa25.78■■□□□ 1.72
NTRK1-203ENST00000392302 RAB3GAP2Q9H2M9 1393 aa25.74■■□□□ 1.71
NTRK1-203ENST00000392302 BCANQ96GW7 911 aa25.72■■□□□ 1.71
NTRK1-203ENST00000392302 KIF27Q86VH2 1401 aa25.71■■□□□ 1.71
NTRK1-203ENST00000392302 MAPKBP1O60336 1514 aa25.71■■□□□ 1.71
NTRK1-203ENST00000392302 FKBP8Q14318 412 aa25.7■■□□□ 1.71
NTRK1-203ENST00000392302 ARHGAP35Q9NRY4 1499 aa25.69■■□□□ 1.7
NTRK1-203ENST00000392302 DDX10Q13206 875 aaKnown RBP25.64■■□□□ 1.7
NTRK1-203ENST00000392302 NEFLP07196 543 aa25.63■■□□□ 1.69
NTRK1-203ENST00000392302 CUX1P39880 1505 aa25.62■■□□□ 1.69
NTRK1-203ENST00000392302 SETD5Q9C0A6 1442 aa25.61■■□□□ 1.69
NTRK1-203ENST00000392302 WDR97A6NE52 1622 aa25.59■■□□□ 1.69
NTRK1-203ENST00000392302 TIAM1Q13009 1591 aa25.56■■□□□ 1.68
NTRK1-203ENST00000392302 MAP3K1Q13233 1512 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms