RNA–Protein interactions for RNA: ENST00000441896.1

TNRC18P3-201, Transcript of trinucleotide repeat containing 18 pseudogene 3, humanhuman

BASIC

Gene TNRC18P3, Length 2,691 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18P3-201ENST00000441896 NISCHQ9Y2I1 1504 aa35.33■■■■□ 3.25
TNRC18P3-201ENST00000441896 CCDC180Q9P1Z9 1646 aa30.74■■■□□ 2.51
TNRC18P3-201ENST00000441896 ZCCHC6Q5VYS8 1495 aaKnown RBP29.65■■■□□ 2.34
TNRC18P3-201ENST00000441896 DCAF8L2P0C7V8 631 aa29.37■■■□□ 2.29
TNRC18P3-201ENST00000441896 ABCC9O60706 1549 aa29.29■■■□□ 2.28
TNRC18P3-201ENST00000441896 HRCP23327 699 aa29.28■■■□□ 2.28
TNRC18P3-201ENST00000441896 DCAF1Q9Y4B6 1507 aa29.13■■■□□ 2.25
TNRC18P3-201ENST00000441896 SHROOM4Q9ULL8 1493 aa28.94■■■□□ 2.22
TNRC18P3-201ENST00000441896 MYO15BQ96JP2 1530 aa28.79■■■□□ 2.2
TNRC18P3-201ENST00000441896 PPARGC1BQ86YN6 1023 aaKnown RBP28.7■■■□□ 2.19
TNRC18P3-201ENST00000441896 NACADO15069 1562 aa28.68■■■□□ 2.18
TNRC18P3-201ENST00000441896 PELP1Q8IZL8 1130 aaKnown RBP28.6■■■□□ 2.17
TNRC18P3-201ENST00000441896 PCGF6Q9BYE7 350 aa28.51■■■□□ 2.15
TNRC18P3-201ENST00000441896 RB1CC1Q8TDY2 1594 aa28.47■■■□□ 2.15
TNRC18P3-201ENST00000441896 SCRIBQ14160 1630 aa28.4■■■□□ 2.14
TNRC18P3-201ENST00000441896 SUPT5HO00267 1087 aaKnown RBP28.3■■■□□ 2.12
TNRC18P3-201ENST00000441896 CHIC1Q5VXU3 224 aa27.99■■■□□ 2.07
TNRC18P3-201ENST00000441896 SCAF1Q9H7N4 1312 aaKnown RBP27.9■■■□□ 2.06
TNRC18P3-201ENST00000441896 UNC13AQ9UPW8 1703 aa27.9■■■□□ 2.06
TNRC18P3-201ENST00000441896 PABPN1Q86U42 306 aaKnown RBP eCLIP27.68■■■□□ 2.02
TNRC18P3-201ENST00000441896 BICRAQ9NZM4 1560 aa27.65■■■□□ 2.02
TNRC18P3-201ENST00000441896 MYT1Q01538 1121 aa27.54■■■□□ 2
TNRC18P3-201ENST00000441896 CECR2Q9BXF3 1484 aa27.53■■■□□ 2
TNRC18P3-201ENST00000441896 TRIM26Q12899 539 aaPredicted RBP27.5■■□□□ 1.99
TNRC18P3-201ENST00000441896 RSF1Q96T23 1441 aaPredicted RBP27.42■■□□□ 1.98
TNRC18P3-201ENST00000441896 LOC105371045A0A1W2PR82 267 aa27.38■■□□□ 1.97
TNRC18P3-201ENST00000441896 ZEB1P37275 1124 aaPredicted RBP27.34■■□□□ 1.97
TNRC18P3-201ENST00000441896 MROH2BQ7Z745 1585 aa27.34■■□□□ 1.97
TNRC18P3-201ENST00000441896 BAZ1AQ9NRL2 1556 aaPredicted RBP27.26■■□□□ 1.95
TNRC18P3-201ENST00000441896 SMARCA4P51532 1647 aa27.16■■□□□ 1.94
TNRC18P3-201ENST00000441896 WIZO95785 1651 aa27.11■■□□□ 1.93
TNRC18P3-201ENST00000441896 ACIN1Q9UKV3 1341 aaKnown RBP27.08■■□□□ 1.93
TNRC18P3-201ENST00000441896 NEUROD1Q13562 356 aa27.02■■□□□ 1.92
TNRC18P3-201ENST00000441896 GTF3C3Q9Y5Q9 886 aa26.87■■□□□ 1.89
TNRC18P3-201ENST00000441896 EIF4G1Q04637 1599 aaKnown RBP26.82■■□□□ 1.88
TNRC18P3-201ENST00000441896 PEG3Q9GZU2 1588 aa26.78■■□□□ 1.88
TNRC18P3-201ENST00000441896 TOP2AP11388 1531 aaKnown RBP26.77■■□□□ 1.88
TNRC18P3-201ENST00000441896 ATAD2BQ9ULI0 1458 aa26.76■■□□□ 1.87
TNRC18P3-201ENST00000441896 SMARCA2P51531 1590 aa26.69■■□□□ 1.86
TNRC18P3-201ENST00000441896 CENPBP07199 599 aaPredicted RBP26.63■■□□□ 1.85
TNRC18P3-201ENST00000441896 BAZ1BQ9UIG0 1483 aaKnown RBP26.6■■□□□ 1.85
TNRC18P3-201ENST00000441896 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
TNRC18P3-201ENST00000441896 NCAPD3P42695 1498 aa26.5■■□□□ 1.83
TNRC18P3-201ENST00000441896 CC2D2AQ9P2K1 1620 aa26.45■■□□□ 1.82
TNRC18P3-201ENST00000441896 DIEXFQ68CQ4 756 aaKnown RBP26.44■■□□□ 1.82
TNRC18P3-201ENST00000441896 HMGXB3Q12766 1538 aa26.43■■□□□ 1.82
TNRC18P3-201ENST00000441896 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.33■■□□□ 1.81
TNRC18P3-201ENST00000441896 CCER1Q8TC90 406 aaPredicted RBP26.26■■□□□ 1.79
TNRC18P3-201ENST00000441896 FAM9AQ8IZU1 332 aaPredicted RBP26.18■■□□□ 1.78
TNRC18P3-201ENST00000441896 TRIM41Q8WV44 630 aa26.11■■□□□ 1.77
TNRC18P3-201ENST00000441896 EHMT2Q96KQ7 1210 aa26.1■■□□□ 1.77
TNRC18P3-201ENST00000441896 YTHDC1Q96MU7 727 aaKnown RBP26.06■■□□□ 1.76
TNRC18P3-201ENST00000441896 ABCC8Q09428 1581 aa26■■□□□ 1.75
TNRC18P3-201ENST00000441896 DNAJC5BQ9UF47 199 aa25.95■■□□□ 1.74
TNRC18P3-201ENST00000441896 CFTRP13569 1480 aa25.92■■□□□ 1.74
TNRC18P3-201ENST00000441896 TTBK1Q5TCY1 1321 aaPredicted RBP25.9■■□□□ 1.74
TNRC18P3-201ENST00000441896 ZNF316A6NFI3 1004 aaPredicted RBP25.86■■□□□ 1.73
TNRC18P3-201ENST00000441896 BCL11AQ9H165 835 aa25.86■■□□□ 1.73
TNRC18P3-201ENST00000441896 CADPSQ9ULU8 1353 aa25.86■■□□□ 1.73
TNRC18P3-201ENST00000441896 WRNQ14191 1432 aaPredicted RBP eCLIP25.81■■□□□ 1.72
TNRC18P3-201ENST00000441896 MIER1Q8N108 512 aa25.76■■□□□ 1.71
TNRC18P3-201ENST00000441896 NESP48681 1621 aa25.71■■□□□ 1.71
TNRC18P3-201ENST00000441896 SYNJ1O43426 1573 aa25.71■■□□□ 1.71
TNRC18P3-201ENST00000441896 PRDM2Q13029 1718 aa25.69■■□□□ 1.7
TNRC18P3-201ENST00000441896 ANP32EQ9BTT0 268 aa25.68■■□□□ 1.7
TNRC18P3-201ENST00000441896 LAMC3Q9Y6N6 1575 aa25.59■■□□□ 1.69
TNRC18P3-201ENST00000441896 FANCD2Q9BXW9 1451 aa25.58■■□□□ 1.69
TNRC18P3-201ENST00000441896 TOP2BQ02880 1626 aa25.56■■□□□ 1.68
TNRC18P3-201ENST00000441896 CUX1P39880 1505 aa25.55■■□□□ 1.68
TNRC18P3-201ENST00000441896 SUPT16HQ9Y5B9 1047 aaKnown RBP25.52■■□□□ 1.68
TNRC18P3-201ENST00000441896 SOGA1O94964 1423 aa25.52■■□□□ 1.68
TNRC18P3-201ENST00000441896 BIVM-ERCC5R4GMW8 1640 aa25.51■■□□□ 1.67
TNRC18P3-201ENST00000441896 TSHZ2Q9NRE2 1034 aa25.51■■□□□ 1.67
TNRC18P3-201ENST00000441896 CSRNP3Q8WYN3 585 aa25.44■■□□□ 1.66
TNRC18P3-201ENST00000441896 RUSC2Q8N2Y8 1516 aa25.44■■□□□ 1.66
TNRC18P3-201ENST00000441896 PDS5BQ9NTI5 1447 aa25.43■■□□□ 1.66
TNRC18P3-201ENST00000441896 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
TNRC18P3-201ENST00000441896 CLSPNQ9HAW4 1339 aa25.39■■□□□ 1.65
TNRC18P3-201ENST00000441896 EEA1Q15075 1411 aa25.34■■□□□ 1.65
TNRC18P3-201ENST00000441896 KIF21AQ7Z4S6 1674 aa25.32■■□□□ 1.64
TNRC18P3-201ENST00000441896 DNMBPQ6XZF7 1577 aa25.29■■□□□ 1.64
TNRC18P3-201ENST00000441896 FGD5Q6ZNL6 1462 aa25.28■■□□□ 1.64
TNRC18P3-201ENST00000441896 TOPBP1Q92547 1522 aa25.28■■□□□ 1.64
TNRC18P3-201ENST00000441896 URB2Q14146 1524 aaKnown RBP25.27■■□□□ 1.64
TNRC18P3-201ENST00000441896 POLA1P09884 1462 aaPredicted RBP25.17■■□□□ 1.62
TNRC18P3-201ENST00000441896 CEP162Q5TB80 1403 aa25.16■■□□□ 1.62
TNRC18P3-201ENST00000441896 KIF27Q86VH2 1401 aa25.14■■□□□ 1.62
TNRC18P3-201ENST00000441896 RAD54L2Q9Y4B4 1467 aa25.13■■□□□ 1.61
TNRC18P3-201ENST00000441896 CUX2O14529 1486 aa25.12■■□□□ 1.61
TNRC18P3-201ENST00000441896 MRC2Q9UBG0 1479 aa25.11■■□□□ 1.61
TNRC18P3-201ENST00000441896 ERCC6Q03468 1493 aa25.1■■□□□ 1.61
TNRC18P3-201ENST00000441896 GOLGA3Q08378 1498 aa25.03■■□□□ 1.6
TNRC18P3-201ENST00000441896 HNRNPUL2Q1KMD3 747 aaKnown RBP25.03■■□□□ 1.6
TNRC18P3-201ENST00000441896 ABCA10Q8WWZ4 1543 aa25.02■■□□□ 1.6
TNRC18P3-201ENST00000441896 KIF21BO75037 1637 aa25.02■■□□□ 1.6
TNRC18P3-201ENST00000441896 UBTFP17480 764 aaKnown RBP25.01■■□□□ 1.59
TNRC18P3-201ENST00000441896 PRKCSHP14314 528 aaPredicted RBP24.99■■□□□ 1.59
TNRC18P3-201ENST00000441896 RAPGEF2Q9Y4G8 1499 aa24.98■■□□□ 1.59
TNRC18P3-201ENST00000441896 IGF1RP08069 1367 aa24.96■■□□□ 1.59
TNRC18P3-201ENST00000441896 WDR62O43379 1518 aa24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms