RNA–Protein interactions for RNA: ENST00000372262.7

CDH22-201, Transcript of cadherin 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH22, Length 3,661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22-201ENST00000372262 NISCHQ9Y2I1 1504 aa37.96■■■■□ 3.67
CDH22-201ENST00000372262 SHROOM4Q9ULL8 1493 aa33.68■■■□□ 2.98
CDH22-201ENST00000372262 DCAF8L2P0C7V8 631 aa33.27■■■□□ 2.92
CDH22-201ENST00000372262 SUPT5HO00267 1087 aaKnown RBP33.2■■■□□ 2.9
CDH22-201ENST00000372262 CCDC180Q9P1Z9 1646 aa31.97■■■□□ 2.71
CDH22-201ENST00000372262 ZCCHC6Q5VYS8 1495 aaKnown RBP31.96■■■□□ 2.71
CDH22-201ENST00000372262 CHIC1Q5VXU3 224 aa31.62■■■□□ 2.65
CDH22-201ENST00000372262 PCGF6Q9BYE7 350 aa31.24■■■□□ 2.59
CDH22-201ENST00000372262 MYO15BQ96JP2 1530 aa31.19■■■□□ 2.58
CDH22-201ENST00000372262 ABCC9O60706 1549 aa31.19■■■□□ 2.58
CDH22-201ENST00000372262 LOC105371045A0A1W2PR82 267 aa31.11■■■□□ 2.57
CDH22-201ENST00000372262 EHMT2Q96KQ7 1210 aa31.04■■■□□ 2.56
CDH22-201ENST00000372262 FAM9AQ8IZU1 332 aaPredicted RBP30.88■■■□□ 2.53
CDH22-201ENST00000372262 HRCP23327 699 aa30.72■■■□□ 2.51
CDH22-201ENST00000372262 SCRIBQ14160 1630 aa30.67■■■□□ 2.5
CDH22-201ENST00000372262 DCAF1Q9Y4B6 1507 aa30.64■■■□□ 2.5
CDH22-201ENST00000372262 TRIM41Q8WV44 630 aa30.64■■■□□ 2.5
CDH22-201ENST00000372262 PPARGC1BQ86YN6 1023 aaKnown RBP30.55■■■□□ 2.48
CDH22-201ENST00000372262 RSF1Q96T23 1441 aaPredicted RBP30.27■■■□□ 2.44
CDH22-201ENST00000372262 TRIM26Q12899 539 aaPredicted RBP30.18■■■□□ 2.42
CDH22-201ENST00000372262 PABPN1Q86U42 306 aaKnown RBP eCLIP30.09■■■□□ 2.41
CDH22-201ENST00000372262 NACADO15069 1562 aa30■■■□□ 2.39
CDH22-201ENST00000372262 TTBK1Q5TCY1 1321 aaPredicted RBP29.97■■■□□ 2.39
CDH22-201ENST00000372262 CECR2Q9BXF3 1484 aa29.95■■■□□ 2.39
CDH22-201ENST00000372262 RB1CC1Q8TDY2 1594 aa29.92■■■□□ 2.38
CDH22-201ENST00000372262 MROH2BQ7Z745 1585 aa29.69■■■□□ 2.34
CDH22-201ENST00000372262 WIZO95785 1651 aa29.5■■■□□ 2.31
CDH22-201ENST00000372262 ZEB1P37275 1124 aaPredicted RBP29.47■■■□□ 2.31
CDH22-201ENST00000372262 UBTFP17480 764 aaKnown RBP29.42■■■□□ 2.3
CDH22-201ENST00000372262 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.39■■■□□ 2.3
CDH22-201ENST00000372262 CCER1Q8TC90 406 aaPredicted RBP29.38■■■□□ 2.29
CDH22-201ENST00000372262 RANGAP1P46060 587 aaPredicted RBP29.35■■■□□ 2.29
CDH22-201ENST00000372262 BAZ1AQ9NRL2 1556 aaPredicted RBP29.17■■■□□ 2.26
CDH22-201ENST00000372262 ABCC8Q09428 1581 aa29.12■■■□□ 2.25
CDH22-201ENST00000372262 CCDC88BA6NC98 1476 aa29.02■■■□□ 2.24
CDH22-201ENST00000372262 CSRNP3Q8WYN3 585 aa29■■■□□ 2.23
CDH22-201ENST00000372262 SOGA1O94964 1423 aa28.95■■■□□ 2.23
CDH22-201ENST00000372262 UNC13AQ9UPW8 1703 aa28.93■■■□□ 2.22
CDH22-201ENST00000372262 SMARCA4P51532 1647 aa28.91■■■□□ 2.22
CDH22-201ENST00000372262 HNRNPUL2Q1KMD3 747 aaKnown RBP28.85■■■□□ 2.21
CDH22-201ENST00000372262 APLP2Q06481 763 aa28.84■■■□□ 2.21
CDH22-201ENST00000372262 TOP2AP11388 1531 aaKnown RBP28.83■■■□□ 2.21
CDH22-201ENST00000372262 CEP162Q5TB80 1403 aa28.8■■■□□ 2.2
CDH22-201ENST00000372262 BICRAQ9NZM4 1560 aa28.8■■■□□ 2.2
CDH22-201ENST00000372262 RUSC2Q8N2Y8 1516 aa28.76■■■□□ 2.19
CDH22-201ENST00000372262 SMARCA2P51531 1590 aa28.7■■■□□ 2.19
CDH22-201ENST00000372262 WRNQ14191 1432 aaPredicted RBP eCLIP28.62■■■□□ 2.17
CDH22-201ENST00000372262 DIEXFQ68CQ4 756 aaKnown RBP28.59■■■□□ 2.17
CDH22-201ENST00000372262 TNIKQ9UKE5 1360 aa28.57■■■□□ 2.16
CDH22-201ENST00000372262 BAZ1BQ9UIG0 1483 aaKnown RBP28.56■■■□□ 2.16
CDH22-201ENST00000372262 ATAD2BQ9ULI0 1458 aa28.5■■■□□ 2.15
CDH22-201ENST00000372262 YTHDC1Q96MU7 727 aaKnown RBP28.48■■■□□ 2.15
CDH22-201ENST00000372262 EIF4G1Q04637 1599 aaKnown RBP28.45■■■□□ 2.15
CDH22-201ENST00000372262 GOLGA3Q08378 1498 aa28.45■■■□□ 2.14
CDH22-201ENST00000372262 SCAF1Q9H7N4 1312 aaKnown RBP28.44■■■□□ 2.14
CDH22-201ENST00000372262 EEA1Q15075 1411 aa28.41■■■□□ 2.14
CDH22-201ENST00000372262 CLIP1P30622 1438 aa28.36■■■□□ 2.13
CDH22-201ENST00000372262 ITGAEP38570 1179 aa28.32■■■□□ 2.12
CDH22-201ENST00000372262 CENPBP07199 599 aaPredicted RBP28.29■■■□□ 2.12
CDH22-201ENST00000372262 NEUROD1Q13562 356 aa28.25■■■□□ 2.11
CDH22-201ENST00000372262 CEP164Q9UPV0 1460 aa28.24■■■□□ 2.11
CDH22-201ENST00000372262 ATP1B4Q9UN42 357 aaPredicted RBP28.21■■■□□ 2.11
CDH22-201ENST00000372262 ZNF316A6NFI3 1004 aaPredicted RBP28.21■■■□□ 2.11
CDH22-201ENST00000372262 ACIN1Q9UKV3 1341 aaKnown RBP28.18■■■□□ 2.1
CDH22-201ENST00000372262 SYNJ1O43426 1573 aa28.17■■■□□ 2.1
CDH22-201ENST00000372262 RAPGEF2Q9Y4G8 1499 aa28.15■■■□□ 2.1
CDH22-201ENST00000372262 GTF3C3Q9Y5Q9 886 aa28.13■■■□□ 2.09
CDH22-201ENST00000372262 PEG3Q9GZU2 1588 aa28.01■■■□□ 2.07
CDH22-201ENST00000372262 VPS8Q8N3P4 1428 aa28■■■□□ 2.07
CDH22-201ENST00000372262 P3H3Q8IVL6 736 aa27.95■■■□□ 2.07
CDH22-201ENST00000372262 KANK4Q5T7N3 995 aaPredicted RBP27.93■■■□□ 2.06
CDH22-201ENST00000372262 MIER1Q8N108 512 aa27.92■■■□□ 2.06
CDH22-201ENST00000372262 NCAPD3P42695 1498 aa27.89■■■□□ 2.06
CDH22-201ENST00000372262 KIF21BO75037 1637 aa27.78■■■□□ 2.04
CDH22-201ENST00000372262 KIF27Q86VH2 1401 aa27.77■■■□□ 2.04
CDH22-201ENST00000372262 FAM50AQ14320 339 aaKnown RBP27.76■■■□□ 2.03
CDH22-201ENST00000372262 PELP1Q8IZL8 1130 aaKnown RBP27.72■■■□□ 2.03
CDH22-201ENST00000372262 DNAJC5BQ9UF47 199 aa27.71■■■□□ 2.03
CDH22-201ENST00000372262 TOP2BQ02880 1626 aa27.64■■■□□ 2.02
CDH22-201ENST00000372262 HMGXB3Q12766 1538 aa27.63■■■□□ 2.01
CDH22-201ENST00000372262 CADPSQ9ULU8 1353 aa27.62■■■□□ 2.01
CDH22-201ENST00000372262 CUX2O14529 1486 aa27.61■■■□□ 2.01
CDH22-201ENST00000372262 CC2D2AQ9P2K1 1620 aa27.58■■■□□ 2.01
CDH22-201ENST00000372262 CFTRP13569 1480 aa27.57■■■□□ 2
CDH22-201ENST00000372262 CUX1P39880 1505 aa27.57■■■□□ 2
CDH22-201ENST00000372262 ARAP1Q96P48 1450 aa27.55■■■□□ 2
CDH22-201ENST00000372262 PRXQ9BXM0 1461 aa27.52■■■□□ 2
CDH22-201ENST00000372262 NESP48681 1621 aa27.47■■□□□ 1.99
CDH22-201ENST00000372262 CARMIL1Q5VZK9 1371 aa27.46■■□□□ 1.99
CDH22-201ENST00000372262 DHX57Q6P158 1386 aaKnown RBP27.46■■□□□ 1.99
CDH22-201ENST00000372262 CCNB3Q8WWL7 1395 aa27.46■■□□□ 1.99
CDH22-201ENST00000372262 IGF1RP08069 1367 aa27.39■■□□□ 1.98
CDH22-201ENST00000372262 HIRIP3Q9BW71 556 aaPredicted RBP27.37■■□□□ 1.97
CDH22-201ENST00000372262 ERICH3Q5RHP9 1530 aa27.36■■□□□ 1.97
CDH22-201ENST00000372262 FANCD2Q9BXW9 1451 aa27.36■■□□□ 1.97
CDH22-201ENST00000372262 SIN3AQ96ST3 1273 aa27.35■■□□□ 1.97
CDH22-201ENST00000372262 ARHGAP35Q9NRY4 1499 aa27.34■■□□□ 1.97
CDH22-201ENST00000372262 BIVM-ERCC5R4GMW8 1640 aa27.33■■□□□ 1.97
CDH22-201ENST00000372262 ARID3CA6NKF2 412 aa27.33■■□□□ 1.97
CDH22-201ENST00000372262 FGD5Q6ZNL6 1462 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms