RNA–Protein interactions for RNA: ENST00000380035.2

SKOR1-202, Transcript of SKI family transcriptional corepressor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SKOR1, Length 3,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKOR1-202ENST00000380035 NISCHQ9Y2I1 1504 aa35.48■■■■□ 3.27
SKOR1-202ENST00000380035 DCAF8L2P0C7V8 631 aa31.73■■■□□ 2.67
SKOR1-202ENST00000380035 SHROOM4Q9ULL8 1493 aa31.63■■■□□ 2.65
SKOR1-202ENST00000380035 SUPT5HO00267 1087 aaKnown RBP31.08■■■□□ 2.57
SKOR1-202ENST00000380035 ZCCHC6Q5VYS8 1495 aaKnown RBP29.76■■■□□ 2.35
SKOR1-202ENST00000380035 CCDC180Q9P1Z9 1646 aa29.61■■■□□ 2.33
SKOR1-202ENST00000380035 EHMT2Q96KQ7 1210 aa29.27■■■□□ 2.28
SKOR1-202ENST00000380035 CHIC1Q5VXU3 224 aa29.26■■■□□ 2.27
SKOR1-202ENST00000380035 ABCC9O60706 1549 aa29.21■■■□□ 2.27
SKOR1-202ENST00000380035 PCGF6Q9BYE7 350 aa29.19■■■□□ 2.26
SKOR1-202ENST00000380035 PPARGC1BQ86YN6 1023 aaKnown RBP29.05■■■□□ 2.24
SKOR1-202ENST00000380035 FAM9AQ8IZU1 332 aaPredicted RBP28.99■■■□□ 2.23
SKOR1-202ENST00000380035 HRCP23327 699 aa28.95■■■□□ 2.23
SKOR1-202ENST00000380035 LOC105371045A0A1W2PR82 267 aa28.91■■■□□ 2.22
SKOR1-202ENST00000380035 SCRIBQ14160 1630 aa28.78■■■□□ 2.2
SKOR1-202ENST00000380035 MYO15BQ96JP2 1530 aa28.67■■■□□ 2.18
SKOR1-202ENST00000380035 TRIM41Q8WV44 630 aa28.63■■■□□ 2.17
SKOR1-202ENST00000380035 DCAF1Q9Y4B6 1507 aa28.46■■■□□ 2.15
SKOR1-202ENST00000380035 PABPN1Q86U42 306 aaKnown RBP eCLIP28.39■■■□□ 2.13
SKOR1-202ENST00000380035 RSF1Q96T23 1441 aaPredicted RBP28.24■■■□□ 2.11
SKOR1-202ENST00000380035 TTBK1Q5TCY1 1321 aaPredicted RBP28.13■■■□□ 2.09
SKOR1-202ENST00000380035 CECR2Q9BXF3 1484 aa28.12■■■□□ 2.09
SKOR1-202ENST00000380035 NACADO15069 1562 aa27.87■■■□□ 2.05
SKOR1-202ENST00000380035 RB1CC1Q8TDY2 1594 aa27.82■■■□□ 2.04
SKOR1-202ENST00000380035 MROH2BQ7Z745 1585 aa27.79■■■□□ 2.04
SKOR1-202ENST00000380035 RANGAP1P46060 587 aaPredicted RBP27.78■■■□□ 2.04
SKOR1-202ENST00000380035 TRIM26Q12899 539 aaPredicted RBP27.71■■■□□ 2.03
SKOR1-202ENST00000380035 UBTFP17480 764 aaKnown RBP27.61■■■□□ 2.01
SKOR1-202ENST00000380035 WIZO95785 1651 aa27.56■■■□□ 2
SKOR1-202ENST00000380035 SCAF1Q9H7N4 1312 aaKnown RBP27.45■■□□□ 1.98
SKOR1-202ENST00000380035 PELP1Q8IZL8 1130 aaKnown RBP27.38■■□□□ 1.97
SKOR1-202ENST00000380035 BAZ1AQ9NRL2 1556 aaPredicted RBP27.29■■□□□ 1.96
SKOR1-202ENST00000380035 ZEB1P37275 1124 aaPredicted RBP27.25■■□□□ 1.95
SKOR1-202ENST00000380035 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.19■■□□□ 1.94
SKOR1-202ENST00000380035 ABCC8Q09428 1581 aa27.18■■□□□ 1.94
SKOR1-202ENST00000380035 CCER1Q8TC90 406 aaPredicted RBP27.17■■□□□ 1.94
SKOR1-202ENST00000380035 CCDC88BA6NC98 1476 aa27.15■■□□□ 1.94
SKOR1-202ENST00000380035 CSRNP3Q8WYN3 585 aa27.09■■□□□ 1.93
SKOR1-202ENST00000380035 APLP2Q06481 763 aa27.01■■□□□ 1.91
SKOR1-202ENST00000380035 YTHDC1Q96MU7 727 aaKnown RBP27.01■■□□□ 1.91
SKOR1-202ENST00000380035 SOGA1O94964 1423 aa27.01■■□□□ 1.91
SKOR1-202ENST00000380035 SMARCA4P51532 1647 aa26.97■■□□□ 1.91
SKOR1-202ENST00000380035 NEUROD1Q13562 356 aa26.92■■□□□ 1.9
SKOR1-202ENST00000380035 GTF3C3Q9Y5Q9 886 aa26.92■■□□□ 1.9
SKOR1-202ENST00000380035 HNRNPUL2Q1KMD3 747 aaKnown RBP26.9■■□□□ 1.9
SKOR1-202ENST00000380035 TOP2AP11388 1531 aaKnown RBP26.88■■□□□ 1.89
SKOR1-202ENST00000380035 RUSC2Q8N2Y8 1516 aa26.83■■□□□ 1.88
SKOR1-202ENST00000380035 ACIN1Q9UKV3 1341 aaKnown RBP26.8■■□□□ 1.88
SKOR1-202ENST00000380035 BAZ1BQ9UIG0 1483 aaKnown RBP26.79■■□□□ 1.88
SKOR1-202ENST00000380035 WRNQ14191 1432 aaPredicted RBP eCLIP26.77■■□□□ 1.88
SKOR1-202ENST00000380035 CENPBP07199 599 aaPredicted RBP26.76■■□□□ 1.87
SKOR1-202ENST00000380035 SMARCA2P51531 1590 aa26.75■■□□□ 1.87
SKOR1-202ENST00000380035 UNC13AQ9UPW8 1703 aa26.73■■□□□ 1.87
SKOR1-202ENST00000380035 ATP1B4Q9UN42 357 aaPredicted RBP26.73■■□□□ 1.87
SKOR1-202ENST00000380035 DIEXFQ68CQ4 756 aaKnown RBP26.72■■□□□ 1.87
SKOR1-202ENST00000380035 CEP162Q5TB80 1403 aa26.69■■□□□ 1.86
SKOR1-202ENST00000380035 BICRAQ9NZM4 1560 aa26.67■■□□□ 1.86
SKOR1-202ENST00000380035 ATAD2BQ9ULI0 1458 aa26.63■■□□□ 1.85
SKOR1-202ENST00000380035 ITGAEP38570 1179 aa26.6■■□□□ 1.85
SKOR1-202ENST00000380035 TNIKQ9UKE5 1360 aa26.47■■□□□ 1.83
SKOR1-202ENST00000380035 P3H3Q8IVL6 736 aa26.43■■□□□ 1.82
SKOR1-202ENST00000380035 GOLGA3Q08378 1498 aa26.41■■□□□ 1.82
SKOR1-202ENST00000380035 CLIP1P30622 1438 aa26.38■■□□□ 1.81
SKOR1-202ENST00000380035 EEA1Q15075 1411 aa26.33■■□□□ 1.81
SKOR1-202ENST00000380035 EIF4G1Q04637 1599 aaKnown RBP26.25■■□□□ 1.79
SKOR1-202ENST00000380035 SYNJ1O43426 1573 aa26.25■■□□□ 1.79
SKOR1-202ENST00000380035 CEP164Q9UPV0 1460 aa26.23■■□□□ 1.79
SKOR1-202ENST00000380035 RAPGEF2Q9Y4G8 1499 aa26.23■■□□□ 1.79
SKOR1-202ENST00000380035 MYT1Q01538 1121 aa26.1■■□□□ 1.77
SKOR1-202ENST00000380035 ZNF316A6NFI3 1004 aaPredicted RBP26.06■■□□□ 1.76
SKOR1-202ENST00000380035 KANK4Q5T7N3 995 aaPredicted RBP26.06■■□□□ 1.76
SKOR1-202ENST00000380035 MIER1Q8N108 512 aa26.05■■□□□ 1.76
SKOR1-202ENST00000380035 FAM50AQ14320 339 aaKnown RBP26.04■■□□□ 1.76
SKOR1-202ENST00000380035 KIF27Q86VH2 1401 aa26.01■■□□□ 1.75
SKOR1-202ENST00000380035 ARID3CA6NKF2 412 aa25.99■■□□□ 1.75
SKOR1-202ENST00000380035 NCAPD3P42695 1498 aa25.97■■□□□ 1.75
SKOR1-202ENST00000380035 CUX2O14529 1486 aa25.96■■□□□ 1.75
SKOR1-202ENST00000380035 PEG3Q9GZU2 1588 aa25.95■■□□□ 1.75
SKOR1-202ENST00000380035 VPS8Q8N3P4 1428 aa25.93■■□□□ 1.74
SKOR1-202ENST00000380035 DNAJC5BQ9UF47 199 aa25.92■■□□□ 1.74
SKOR1-202ENST00000380035 CADPSQ9ULU8 1353 aa25.87■■□□□ 1.73
SKOR1-202ENST00000380035 CUX1P39880 1505 aa25.8■■□□□ 1.72
SKOR1-202ENST00000380035 CARMIL1Q5VZK9 1371 aa25.78■■□□□ 1.72
SKOR1-202ENST00000380035 BCANQ96GW7 911 aa25.75■■□□□ 1.71
SKOR1-202ENST00000380035 CFTRP13569 1480 aa25.74■■□□□ 1.71
SKOR1-202ENST00000380035 TOP2BQ02880 1626 aa25.73■■□□□ 1.71
SKOR1-202ENST00000380035 NESP48681 1621 aa25.71■■□□□ 1.71
SKOR1-202ENST00000380035 KIF21BO75037 1637 aa25.7■■□□□ 1.71
SKOR1-202ENST00000380035 TDRD9Q8NDG6 1382 aaKnown RBP25.68■■□□□ 1.7
SKOR1-202ENST00000380035 IGF1RP08069 1367 aa25.67■■□□□ 1.7
SKOR1-202ENST00000380035 HMGXB3Q12766 1538 aa25.65■■□□□ 1.7
SKOR1-202ENST00000380035 RAD54L2Q9Y4B4 1467 aa25.65■■□□□ 1.7
SKOR1-202ENST00000380035 FBLN2P98095 1184 aa25.64■■□□□ 1.7
SKOR1-202ENST00000380035 FGD5Q6ZNL6 1462 aa25.63■■□□□ 1.69
SKOR1-202ENST00000380035 CC2D2AQ9P2K1 1620 aa25.63■■□□□ 1.69
SKOR1-202ENST00000380035 FANCD2Q9BXW9 1451 aa25.62■■□□□ 1.69
SKOR1-202ENST00000380035 ARAP1Q96P48 1450 aa25.61■■□□□ 1.69
SKOR1-202ENST00000380035 PRXQ9BXM0 1461 aa25.59■■□□□ 1.69
SKOR1-202ENST00000380035 HIRIP3Q9BW71 556 aaPredicted RBP25.51■■□□□ 1.67
SKOR1-202ENST00000380035 FHOD3Q2V2M9 1422 aa25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms